RNA–Protein interactions for RNA: ENST00000373570.8

RPL35-202, Transcript of ribosomal protein L35, humanhuman

TSL 3 BASIC

Gene RPL35, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-202ENST00000373570 NSD2O96028 1365 aa13.03□□□□□ -0.32
RPL35-202ENST00000373570 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
RPL35-202ENST00000373570 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.33
RPL35-202ENST00000373570 CARD11Q9BXL7 1154 aa13.02□□□□□ -0.33
RPL35-202ENST00000373570 GPR162Q16538 588 aa13.01□□□□□ -0.33
RPL35-202ENST00000373570 IP6K1Q92551 441 aa13.01□□□□□ -0.33
RPL35-202ENST00000373570 SLC12A5Q9H2X9 1139 aa13.01□□□□□ -0.33
RPL35-202ENST00000373570 ANKRD36BQ8N2N9 1353 aa13.01□□□□□ -0.33
RPL35-202ENST00000373570 MEGF6O75095 1541 aa13□□□□□ -0.33
RPL35-202ENST00000373570 HDGFL2Q7Z4V5 671 aaPredicted RBP13□□□□□ -0.33
RPL35-202ENST00000373570 KIF13BQ9NQT8 1826 aa12.99□□□□□ -0.33
RPL35-202ENST00000373570 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
RPL35-202ENST00000373570 USP47Q96K76 1375 aa12.99□□□□□ -0.33
RPL35-202ENST00000373570 KCNQ4P56696 695 aa12.99□□□□□ -0.33
RPL35-202ENST00000373570 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
RPL35-202ENST00000373570 TMC1Q8TDI8 760 aa12.99□□□□□ -0.33
RPL35-202ENST00000373570 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
RPL35-202ENST00000373570 POLD1P28340 1107 aa12.98□□□□□ -0.33
RPL35-202ENST00000373570 NLGN2Q8NFZ4 835 aa12.98□□□□□ -0.33
RPL35-202ENST00000373570 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
RPL35-202ENST00000373570 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
RPL35-202ENST00000373570 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
RPL35-202ENST00000373570 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
RPL35-202ENST00000373570 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.33
RPL35-202ENST00000373570 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
RPL35-202ENST00000373570 LTV1Q96GA3 475 aaPredicted RBP12.96□□□□□ -0.33
RPL35-202ENST00000373570 TERF2IPQ9NYB0 399 aa12.96□□□□□ -0.33
RPL35-202ENST00000373570 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.33
RPL35-202ENST00000373570 N4BP2Q86UW6 1770 aaPredicted RBP12.95□□□□□ -0.34
RPL35-202ENST00000373570 GIGYF1O75420 1035 aaPredicted RBP12.95□□□□□ -0.34
RPL35-202ENST00000373570 YBX3P16989 372 aaKnown RBP eCLIP12.95□□□□□ -0.345e-39■■□□□ 12.3
RPL35-202ENST00000373570 HOXC9P31274 260 aa12.95□□□□□ -0.34
RPL35-202ENST00000373570 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPL35-202ENST00000373570 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
RPL35-202ENST00000373570 FBLN1P23142 703 aa12.94□□□□□ -0.34
RPL35-202ENST00000373570 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
RPL35-202ENST00000373570 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
RPL35-202ENST00000373570 ZCRB1Q8TBF4 217 aaKnown RBP12.94□□□□□ -0.34
RPL35-202ENST00000373570 SYTL4Q96C24 671 aaPredicted RBP12.94□□□□□ -0.34
RPL35-202ENST00000373570 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
RPL35-202ENST00000373570 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
RPL35-202ENST00000373570 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
RPL35-202ENST00000373570 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
RPL35-202ENST00000373570 CEP350Q5VT06 3117 aa12.93□□□□□ -0.34
RPL35-202ENST00000373570 COG3Q96JB2 828 aa12.92□□□□□ -0.34
RPL35-202ENST00000373570 TESK2Q96S53 571 aa12.92□□□□□ -0.34
RPL35-202ENST00000373570 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
RPL35-202ENST00000373570 AMPHP49418 695 aa12.91□□□□□ -0.34
RPL35-202ENST00000373570 ARFGEF1Q9Y6D6 1849 aa12.9□□□□□ -0.34
RPL35-202ENST00000373570 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
RPL35-202ENST00000373570 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
RPL35-202ENST00000373570 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
RPL35-202ENST00000373570 NBPF6Q5VWK0 638 aa12.9□□□□□ -0.34
RPL35-202ENST00000373570 NBPF4Q96M43 638 aa12.9□□□□□ -0.34
RPL35-202ENST00000373570 CICQ96RK0 1608 aaPredicted RBP12.9□□□□□ -0.34
RPL35-202ENST00000373570 ADCY9O60503 1353 aa12.9□□□□□ -0.34
RPL35-202ENST00000373570 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
RPL35-202ENST00000373570 IFFO2Q5TF58 517 aa12.89□□□□□ -0.35
RPL35-202ENST00000373570 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
RPL35-202ENST00000373570 SBF1O95248 1867 aa12.89□□□□□ -0.35
RPL35-202ENST00000373570 MYH14Q7Z406 1995 aaKnown RBP12.89□□□□□ -0.35
RPL35-202ENST00000373570 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
RPL35-202ENST00000373570 MSH5O43196 834 aa12.88□□□□□ -0.35
RPL35-202ENST00000373570 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
RPL35-202ENST00000373570 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
RPL35-202ENST00000373570 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
RPL35-202ENST00000373570 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
RPL35-202ENST00000373570 CD2APQ9Y5K6 639 aa12.87□□□□□ -0.35
RPL35-202ENST00000373570 NCAPD2Q15021 1401 aa12.87□□□□□ -0.35
RPL35-202ENST00000373570 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
RPL35-202ENST00000373570 INSRP06213 1382 aa12.86□□□□□ -0.35
RPL35-202ENST00000373570 FYB1O15117 783 aa12.86□□□□□ -0.35
RPL35-202ENST00000373570 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
RPL35-202ENST00000373570 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
RPL35-202ENST00000373570 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
RPL35-202ENST00000373570 FLAD1Q8NFF5 587 aa12.85□□□□□ -0.35
RPL35-202ENST00000373570 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
RPL35-202ENST00000373570 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
RPL35-202ENST00000373570 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
RPL35-202ENST00000373570 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
RPL35-202ENST00000373570 GGNBP2Q9H3C7 697 aa12.84□□□□□ -0.35
RPL35-202ENST00000373570 FLT4P35916 1363 aa12.83□□□□□ -0.36
RPL35-202ENST00000373570 WDR90Q96KV7 1748 aa12.83□□□□□ -0.36
RPL35-202ENST00000373570 CYP27B1O15528 508 aa12.83□□□□□ -0.36
RPL35-202ENST00000373570 TMF1P82094 1093 aa12.83□□□□□ -0.36
RPL35-202ENST00000373570 HSP90AB2PQ58FF8 381 aa12.83□□□□□ -0.36
RPL35-202ENST00000373570 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
RPL35-202ENST00000373570 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
RPL35-202ENST00000373570 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
RPL35-202ENST00000373570 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
RPL35-202ENST00000373570 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
RPL35-202ENST00000373570 SCN11AQ9UI33 1791 aa12.81□□□□□ -0.36
RPL35-202ENST00000373570 HSPA6P17066 643 aa12.8□□□□□ -0.36
RPL35-202ENST00000373570 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
RPL35-202ENST00000373570 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
RPL35-202ENST00000373570 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
RPL35-202ENST00000373570 AFDNP55196 1824 aaKnown RBP12.8□□□□□ -0.36
RPL35-202ENST00000373570 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
RPL35-202ENST00000373570 PIGBQ92521 554 aa12.79□□□□□ -0.36
RPL35-202ENST00000373570 AK7Q96M32 723 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms