RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 KIF3BO15066 747 aa10.8□□□□□ -0.68
PTPRT-205ENST00000373193 PDRG1Q9NUG6 133 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 NOB1Q9ULX3 412 aaKnown RBP10.79□□□□□ -0.68
PTPRT-205ENST00000373193 EVC2Q86UK5 1308 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 TMCO4Q5TGY1 634 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 GIGYF2Q6Y7W6 1299 aaKnown RBP10.79□□□□□ -0.68
PTPRT-205ENST00000373193 IMMTQ16891 758 aaKnown RBP10.79□□□□□ -0.68
PTPRT-205ENST00000373193 MSL1Q68DK7 614 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 HOOK3Q86VS8 718 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 JAKMIP1Q96N16 626 aaKnown RBP10.79□□□□□ -0.68
PTPRT-205ENST00000373193 CCDC6Q16204 474 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 ZSCAN12O43309 604 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 HNRNPMP52272 730 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPRT-205ENST00000373193 SEPT6Q14141 434 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 NUTM2GQ5VZR2 741 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 NUP88Q99567 741 aaPredicted RBP10.79□□□□□ -0.68
PTPRT-205ENST00000373193 SOGA1O94964 1423 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 FERMT3Q86UX7 667 aa10.79□□□□□ -0.68
PTPRT-205ENST00000373193 ERC1Q8IUD2 1116 aa10.78□□□□□ -0.68
PTPRT-205ENST00000373193 TOP1P11387 765 aaKnown RBP10.78□□□□□ -0.68
PTPRT-205ENST00000373193 ARID4AP29374 1257 aaPredicted RBP10.78□□□□□ -0.68
PTPRT-205ENST00000373193 KIF2AO00139 706 aaPredicted RBP10.78□□□□□ -0.68
PTPRT-205ENST00000373193 FBF1Q8TES7 1133 aa10.78□□□□□ -0.68
PTPRT-205ENST00000373193 HSPA4P34932 840 aa10.78□□□□□ -0.68
PTPRT-205ENST00000373193 MCM3P25205 808 aa10.78□□□□□ -0.68
PTPRT-205ENST00000373193 MXRA7P84157 204 aa10.78□□□□□ -0.68
PTPRT-205ENST00000373193 COMMD10Q9Y6G5 202 aa10.77□□□□□ -0.68
PTPRT-205ENST00000373193 GNAI1P63096 354 aa10.77□□□□□ -0.68
PTPRT-205ENST00000373193 PRPF4BQ13523 1007 aaKnown RBP10.77□□□□□ -0.68
PTPRT-205ENST00000373193 SPECC1LQ69YQ0 1117 aa10.77□□□□□ -0.68
PTPRT-205ENST00000373193 UBA5Q9GZZ9 404 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 USP25Q9UHP3 1055 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 IGSF3O75054 1194 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 CKAP2LQ8IYA6 745 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 HIP1O00291 1037 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.69
PTPRT-205ENST00000373193 DRC1Q96MC2 740 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 CASTP20810 708 aaKnown RBP10.77□□□□□ -0.69
PTPRT-205ENST00000373193 BACH2Q9BYV9 841 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 CEP112Q8N8E3 955 aa10.77□□□□□ -0.69
PTPRT-205ENST00000373193 NOL7Q9UMY1 257 aaKnown RBP10.77□□□□□ -0.69
PTPRT-205ENST00000373193 ANKRD1Q15327 319 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 WASHC2CQ9Y4E1 1318 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 CCDC144AA2RUR9 1427 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 DESP17661 470 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 CWC27Q6UX04 472 aaKnown RBP10.76□□□□□ -0.69
PTPRT-205ENST00000373193 TTC31Q49AM3 519 aaPredicted RBP10.76□□□□□ -0.69
PTPRT-205ENST00000373193 C6orf163Q5TEZ5 329 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 SOGA3Q5TF21 947 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 PPP1R14CQ8TAE6 165 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 CCDC183Q5T5S1 534 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 TMC6Q7Z403 805 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 HOMER2Q9NSB8 354 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 CACNA2D4Q7Z3S7 1137 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 WDR66Q8TBY9 1149 aa10.76□□□□□ -0.69
PTPRT-205ENST00000373193 ZNF830Q96NB3 372 aaPredicted RBP10.75□□□□□ -0.69
PTPRT-205ENST00000373193 VGLL3A8MV65 326 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 CEP135Q66GS9 1140 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 ERCC6Q03468 1493 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 TERF1P54274 439 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 DDX54Q8TDD1 881 aaKnown RBP10.75□□□□□ -0.69
PTPRT-205ENST00000373193 TDO2P48775 406 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 SPTY2D1Q68D10 685 aaPredicted RBP10.75□□□□□ -0.69
PTPRT-205ENST00000373193 ZWINTO95229 277 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 SNW1Q13573 536 aaKnown RBP10.75□□□□□ -0.69
PTPRT-205ENST00000373193 TSR2Q969E8 191 aaKnown RBP10.75□□□□□ -0.69
PTPRT-205ENST00000373193 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
PTPRT-205ENST00000373193 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 POTEJP0CG39 1038 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 CHMP4BP1P59074 171 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 NAA25Q14CX7 972 aa10.75□□□□□ -0.69
PTPRT-205ENST00000373193 ZNF76P36508 570 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
PTPRT-205ENST00000373193 ABCC8Q09428 1581 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 USP5P45974 858 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 CNNM1Q9NRU3 951 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 MCM6Q14566 821 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 FSD2A1L4K1 749 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 BIN1O00499 593 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 BCAR3O75815 825 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 FKBP4Q02790 459 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTPRT-205ENST00000373193 NBPF1Q3BBV0 1214 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 KRT222Q8N1A0 295 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTPRT-205ENST00000373193 V9GYY5 206 aaPredicted RBP10.74□□□□□ -0.69
PTPRT-205ENST00000373193 CTNNA2P26232 953 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 FAM160A1Q05DH4 1040 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 FKBP15Q5T1M5 1219 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 A0A1W2PRG0 241 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 BLOC1S2Q6QNY1 142 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 GNAI2P04899 355 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 PAFAH1B1P43034 410 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 CUX2O14529 1486 aa10.74□□□□□ -0.69
PTPRT-205ENST00000373193 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
PTPRT-205ENST00000373193 CETN2P41208 172 aa10.73□□□□□ -0.69
PTPRT-205ENST00000373193 ADAMTS8Q9UP79 889 aa10.73□□□□□ -0.69
PTPRT-205ENST00000373193 CARMIL1Q5VZK9 1371 aa10.73□□□□□ -0.69
PTPRT-205ENST00000373193 HSF2BPO75031 334 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms