RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 FSD2A1L4K1 749 aa17.97■□□□□ 0.47
PCDH19-202ENST00000373034 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
PCDH19-202ENST00000373034 SMG6Q86US8 1419 aaKnown RBP17.97■□□□□ 0.47
PCDH19-202ENST00000373034 GOLGA6L9A6NEM1 432 aa17.97■□□□□ 0.47
PCDH19-202ENST00000373034 ANKS4BQ8N8V4 417 aa17.97■□□□□ 0.47
PCDH19-202ENST00000373034 NEMFO60524 1076 aa17.97■□□□□ 0.47
PCDH19-202ENST00000373034 ALS2CR12Q96Q35 445 aa17.97■□□□□ 0.47
PCDH19-202ENST00000373034 KRT32Q14532 448 aa17.97■□□□□ 0.47
PCDH19-202ENST00000373034 SURF6O75683 361 aaKnown RBP17.96■□□□□ 0.47
PCDH19-202ENST00000373034 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.47
PCDH19-202ENST00000373034 NUTM2DQ5VT03 806 aaPredicted RBP17.96■□□□□ 0.47
PCDH19-202ENST00000373034 ZSCAN31Q96LW9 406 aaPredicted RBP17.96■□□□□ 0.47
PCDH19-202ENST00000373034 TSG101Q99816 390 aa17.96■□□□□ 0.47
PCDH19-202ENST00000373034 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.46
PCDH19-202ENST00000373034 FAM114A1Q8IWE2 563 aa17.95■□□□□ 0.46
PCDH19-202ENST00000373034 WDR66Q8TBY9 1149 aa17.95■□□□□ 0.46
PCDH19-202ENST00000373034 RAI14Q9P0K7 980 aa17.95■□□□□ 0.46
PCDH19-202ENST00000373034 AIMP1Q12904 312 aaKnown RBP17.95■□□□□ 0.46
PCDH19-202ENST00000373034 CACNA2D4Q7Z3S7 1137 aa17.95■□□□□ 0.46
PCDH19-202ENST00000373034 BRD4O60885 1362 aaPredicted RBP17.95■□□□□ 0.46
PCDH19-202ENST00000373034 KIF4BQ2VIQ3 1234 aa17.95■□□□□ 0.46
PCDH19-202ENST00000373034 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
PCDH19-202ENST00000373034 CEP112Q8N8E3 955 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 FERMT1Q9BQL6 677 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 RAPGEF4Q8WZA2 1011 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 HOMER2Q9NSB8 354 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 CNTLNQ9NXG0 1405 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 ATP2B2Q01814 1243 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 GSDMDP57764 484 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 TSNARE1Q96NA8 513 aa17.94■□□□□ 0.46
PCDH19-202ENST00000373034 NAP1L3Q99457 506 aaPredicted RBP17.93■□□□□ 0.46
PCDH19-202ENST00000373034 CUX1P39880 1505 aa17.93■□□□□ 0.46
PCDH19-202ENST00000373034 CCDC183Q5T5S1 534 aa17.93■□□□□ 0.46
PCDH19-202ENST00000373034 NSRP1Q9H0G5 558 aaKnown RBP17.93■□□□□ 0.46
PCDH19-202ENST00000373034 STK3Q13188 491 aa17.93■□□□□ 0.46
PCDH19-202ENST00000373034 ANO10Q9NW15 660 aa17.93■□□□□ 0.46
PCDH19-202ENST00000373034 CTNNA3Q9UI47 895 aa17.93■□□□□ 0.46
PCDH19-202ENST00000373034 TOP1P11387 765 aaKnown RBP17.92■□□□□ 0.46
PCDH19-202ENST00000373034 PRKCSHP14314 528 aaPredicted RBP17.92■□□□□ 0.46
PCDH19-202ENST00000373034 RBM25P49756 843 aaKnown RBP17.92■□□□□ 0.46
PCDH19-202ENST00000373034 PRDM10Q9NQV6 1147 aa17.92■□□□□ 0.46
PCDH19-202ENST00000373034 IKBKGQ9Y6K9 419 aa17.92■□□□□ 0.46
PCDH19-202ENST00000373034 CTAGE5O15320 804 aa17.92■□□□□ 0.46
PCDH19-202ENST00000373034 IBSPP21815 317 aaPredicted RBP17.92■□□□□ 0.46
PCDH19-202ENST00000373034 BLOC1S2Q6QNY1 142 aa17.92■□□□□ 0.46
PCDH19-202ENST00000373034 TNIP1Q15025 636 aa17.92■□□□□ 0.46
PCDH19-202ENST00000373034 DYNC1I1O14576 645 aa17.92■□□□□ 0.46
PCDH19-202ENST00000373034 CTNNA2P26232 953 aa17.92■□□□□ 0.46
PCDH19-202ENST00000373034 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
PCDH19-202ENST00000373034 SYCE3A1L190 88 aa17.91■□□□□ 0.46
PCDH19-202ENST00000373034 CNNM1Q9NRU3 951 aa17.91■□□□□ 0.46
PCDH19-202ENST00000373034 PAXBP1Q9Y5B6 917 aa17.91■□□□□ 0.46
PCDH19-202ENST00000373034 NOL3O60936 208 aaKnown RBP17.91■□□□□ 0.46
PCDH19-202ENST00000373034 FBF1Q8TES7 1133 aa17.91■□□□□ 0.46
PCDH19-202ENST00000373034 CTNNBL1Q8WYA6 563 aaPredicted RBP17.91■□□□□ 0.46
PCDH19-202ENST00000373034 MPHOSPH10O00566 681 aaKnown RBP17.91■□□□□ 0.46
PCDH19-202ENST00000373034 ZNF76P36508 570 aa17.91■□□□□ 0.46
PCDH19-202ENST00000373034 CCT4P50991 539 aaKnown RBP17.91■□□□□ 0.46
PCDH19-202ENST00000373034 HLTFQ14527 1009 aaKnown RBP eCLIP17.91■□□□□ 0.46
PCDH19-202ENST00000373034 URI1O94763 535 aaPredicted RBP17.9■□□□□ 0.46
PCDH19-202ENST00000373034 SSBP05455 408 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDH19-202ENST00000373034 EHBP1Q8NDI1 1231 aa17.9■□□□□ 0.46
PCDH19-202ENST00000373034 NUP88Q99567 741 aaPredicted RBP17.9■□□□□ 0.46
PCDH19-202ENST00000373034 MCM5P33992 734 aa17.9■□□□□ 0.46
PCDH19-202ENST00000373034 PDE3AQ14432 1141 aa17.9■□□□□ 0.46
PCDH19-202ENST00000373034 PPP4R3AQ6IN85 833 aa17.9■□□□□ 0.46
PCDH19-202ENST00000373034 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
PCDH19-202ENST00000373034 UBAC1Q9BSL1 405 aa17.9■□□□□ 0.46
PCDH19-202ENST00000373034 GTF2F1P35269 517 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDH19-202ENST00000373034 COMMD10Q9Y6G5 202 aa17.9■□□□□ 0.46
PCDH19-202ENST00000373034 KANK4Q5T7N3 995 aaPredicted RBP17.9■□□□□ 0.46
PCDH19-202ENST00000373034 CCDC160A6NGH7 325 aa17.89■□□□□ 0.46
PCDH19-202ENST00000373034 PABPN1LA6NDY0 278 aaKnown RBP17.89■□□□□ 0.45
PCDH19-202ENST00000373034 HSF2BPO75031 334 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 PHAXQ9H814 394 aaKnown RBP17.89■□□□□ 0.45
PCDH19-202ENST00000373034 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 NUP133Q8WUM0 1156 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 HNRNPMP52272 730 aaKnown RBP eCLIP17.89■□□□□ 0.45
PCDH19-202ENST00000373034 MSL1Q68DK7 614 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 CCDC6Q16204 474 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 SOGA1O94964 1423 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 KIF3CO14782 793 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 LMAN1P49257 510 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 PPP4R3BQ5MIZ7 849 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.45
PCDH19-202ENST00000373034 MCM4P33991 863 aa17.88■□□□□ 0.45
PCDH19-202ENST00000373034 PPP1R14CQ8TAE6 165 aa17.88■□□□□ 0.45
PCDH19-202ENST00000373034 ZNF287Q9HBT7 754 aa17.88■□□□□ 0.45
PCDH19-202ENST00000373034 YEATS4O95619 227 aa17.88■□□□□ 0.45
PCDH19-202ENST00000373034 RAB34Q9BZG1 259 aa17.88■□□□□ 0.45
PCDH19-202ENST00000373034 CLGNO14967 610 aa17.88■□□□□ 0.45
PCDH19-202ENST00000373034 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.87■□□□□ 0.45
PCDH19-202ENST00000373034 CPSF2Q9P2I0 782 aaKnown RBP17.87■□□□□ 0.45
PCDH19-202ENST00000373034 SEC63Q9UGP8 760 aaKnown RBP17.87■□□□□ 0.45
PCDH19-202ENST00000373034 TMCO5BA8MYB1 307 aa17.87■□□□□ 0.45
PCDH19-202ENST00000373034 STMN4Q9H169 189 aaPredicted RBP17.87■□□□□ 0.45
PCDH19-202ENST00000373034 CETN1Q12798 172 aa17.87■□□□□ 0.45
PCDH19-202ENST00000373034 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
PCDH19-202ENST00000373034 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms