RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CRB1P82279 1406 aa31.94■■■□□ 2.7
CTSA-203ENST00000372459 ZBTB7CA1YPR0 619 aa31.94■■■□□ 2.7
CTSA-203ENST00000372459 ALS2Q96Q42 1657 aa31.94■■■□□ 2.7
CTSA-203ENST00000372459 C8orf58Q8NAV2 365 aa31.93■■■□□ 2.7
CTSA-203ENST00000372459 MSH5O43196 834 aa31.92■■■□□ 2.7
CTSA-203ENST00000372459 ELL2O00472 640 aaPredicted RBP31.92■■■□□ 2.7
CTSA-203ENST00000372459 HAP1P54257 671 aaPredicted RBP31.91■■■□□ 2.7
CTSA-203ENST00000372459 MRPL50Q8N5N7 158 aaKnown RBP31.91■■■□□ 2.7
CTSA-203ENST00000372459 NPHP3Q7Z494 1330 aa31.89■■■□□ 2.7
CTSA-203ENST00000372459 XIRP1Q702N8 1843 aaKnown RBP31.89■■■□□ 2.7
CTSA-203ENST00000372459 DDX19BQ9UMR2 479 aa31.89■■■□□ 2.7
CTSA-203ENST00000372459 KIAA0232Q92628 1395 aa31.88■■■□□ 2.69
CTSA-203ENST00000372459 GNAT3A8MTJ3 354 aa31.88■■■□□ 2.69
CTSA-203ENST00000372459 IGHDP01880 384 aa31.88■■■□□ 2.69
CTSA-203ENST00000372459 USHBP1Q8N6Y0 703 aa31.88■■■□□ 2.69
CTSA-203ENST00000372459 ARHGAP45Q92619 1136 aa31.88■■■□□ 2.69
CTSA-203ENST00000372459 NBPF6Q5VWK0 638 aa31.87■■■□□ 2.69
CTSA-203ENST00000372459 NBPF4Q96M43 638 aa31.87■■■□□ 2.69
CTSA-203ENST00000372459 PLEKHG5O94827 1062 aa31.87■■■□□ 2.69
CTSA-203ENST00000372459 ITPRIPQ8IWB1 547 aa31.87■■■□□ 2.69
CTSA-203ENST00000372459 MAP3K5Q99683 1374 aa31.85■■■□□ 2.69
CTSA-203ENST00000372459 TMEM57Q8N5G2 664 aa31.84■■■□□ 2.69
CTSA-203ENST00000372459 PCDHB15Q9Y5E8 787 aa31.84■■■□□ 2.69
CTSA-203ENST00000372459 LRRC37A3O60309 1634 aa31.84■■■□□ 2.69
CTSA-203ENST00000372459 DDX17Q92841 729 aaKnown RBP31.83■■■□□ 2.69
CTSA-203ENST00000372459 MED1Q15648 1581 aaPredicted RBP31.82■■■□□ 2.68
CTSA-203ENST00000372459 SKAP1Q86WV1 359 aa31.82■■■□□ 2.68
CTSA-203ENST00000372459 TSPYL4Q9UJ04 414 aa31.81■■■□□ 2.68
CTSA-203ENST00000372459 RGPD2P0DJD1 1756 aa31.81■■■□□ 2.68
CTSA-203ENST00000372459 TNS3Q68CZ2 1445 aa31.8■■■□□ 2.68
CTSA-203ENST00000372459 ANKRD24Q8TF21 1146 aa31.79■■■□□ 2.68
CTSA-203ENST00000372459 ZNF335Q9H4Z2 1342 aaPredicted RBP31.79■■■□□ 2.68
CTSA-203ENST00000372459 LRRC59Q96AG4 307 aaKnown RBP31.79■■■□□ 2.68
CTSA-203ENST00000372459 RWDD1Q9H446 243 aaPredicted RBP31.79■■■□□ 2.68
CTSA-203ENST00000372459 NCAPD2Q15021 1401 aa31.78■■■□□ 2.68
CTSA-203ENST00000372459 PXDNQ92626 1479 aa31.78■■■□□ 2.68
CTSA-203ENST00000372459 KRT24Q2M2I5 525 aa31.77■■■□□ 2.68
CTSA-203ENST00000372459 MIS18AQ9NYP9 233 aa31.76■■■□□ 2.68
CTSA-203ENST00000372459 API5Q9BZZ5 524 aaKnown RBP31.76■■■□□ 2.67
CTSA-203ENST00000372459 ZC3H6P61129 1189 aaKnown RBP31.75■■■□□ 2.67
CTSA-203ENST00000372459 IL17REQ8NFR9 667 aa31.75■■■□□ 2.67
CTSA-203ENST00000372459 AXIN2Q9Y2T1 843 aa31.75■■■□□ 2.67
CTSA-203ENST00000372459 PDE4AP27815 886 aa31.74■■■□□ 2.67
CTSA-203ENST00000372459 CHMP4BQ9H444 224 aaKnown RBP31.74■■■□□ 2.67
CTSA-203ENST00000372459 BABAM1Q9NWV8 329 aa31.74■■■□□ 2.67
CTSA-203ENST00000372459 CAMTA1Q9Y6Y1 1673 aa31.74■■■□□ 2.67
CTSA-203ENST00000372459 SPATA31A3Q5VYP0 1347 aa31.74■■■□□ 2.67
CTSA-203ENST00000372459 BRINP3Q76B58 766 aa31.74■■■□□ 2.67
CTSA-203ENST00000372459 ABCC4O15439 1325 aa31.73■■■□□ 2.67
CTSA-203ENST00000372459 ZBTB40Q9NUA8 1239 aa31.73■■■□□ 2.67
CTSA-203ENST00000372459 PLEKHO1Q53GL0 409 aaPredicted RBP31.72■■■□□ 2.67
CTSA-203ENST00000372459 AMOTQ4VCS5 1084 aa31.71■■■□□ 2.67
CTSA-203ENST00000372459 BACH2Q9BYV9 841 aa31.71■■■□□ 2.67
CTSA-203ENST00000372459 TAF7Q15545 349 aaPredicted RBP31.7■■■□□ 2.67
CTSA-203ENST00000372459 ERBB3P21860 1342 aa31.7■■■□□ 2.67
CTSA-203ENST00000372459 RGPD5Q99666 1765 aa31.7■■■□□ 2.67
CTSA-203ENST00000372459 RGS3P49796 1198 aa31.69■■■□□ 2.66
CTSA-203ENST00000372459 CEMIPQ8WUJ3 1361 aa31.68■■■□□ 2.66
CTSA-203ENST00000372459 SLAIN2Q9P270 581 aa31.68■■■□□ 2.66
CTSA-203ENST00000372459 HDAC1Q13547 482 aaPredicted RBP31.68■■■□□ 2.66
CTSA-203ENST00000372459 AKAP4Q5JQC9 854 aa31.67■■■□□ 2.66
CTSA-203ENST00000372459 ERICH6Q7L0X2 663 aa31.67■■■□□ 2.66
CTSA-203ENST00000372459 LMO7Q8WWI1 1683 aa31.67■■■□□ 2.66
CTSA-203ENST00000372459 ABCC6O95255 1503 aa31.66■■■□□ 2.66
CTSA-203ENST00000372459 ZNF530Q6P9A1 599 aaPredicted RBP31.65■■■□□ 2.66
CTSA-203ENST00000372459 PTPRCP08575 1304 aa31.65■■■□□ 2.66
CTSA-203ENST00000372459 SOS1Q07889 1333 aaPredicted RBP31.65■■■□□ 2.66
CTSA-203ENST00000372459 CRYBG1Q9Y4K1 1723 aa31.65■■■□□ 2.66
CTSA-203ENST00000372459 ZBTB7BO15156 539 aaPredicted RBP31.65■■■□□ 2.66
CTSA-203ENST00000372459 CABLES1Q8TDN4 633 aa31.64■■■□□ 2.66
CTSA-203ENST00000372459 COL18A1P39060 1754 aa31.63■■■□□ 2.65
CTSA-203ENST00000372459 C1orf141Q5JVX7 400 aa31.61■■■□□ 2.65
CTSA-203ENST00000372459 SLC4A2P04920 1241 aa31.61■■■□□ 2.65
CTSA-203ENST00000372459 CPDO75976 1380 aa31.6■■■□□ 2.65
CTSA-203ENST00000372459 SOS2Q07890 1332 aaPredicted RBP31.59■■■□□ 2.65
CTSA-203ENST00000372459 LGR6Q9HBX8 967 aa31.59■■■□□ 2.65
CTSA-203ENST00000372459 PDZRN3Q9UPQ7 1066 aa31.59■■■□□ 2.65
CTSA-203ENST00000372459 FAM161AQ3B820 660 aa31.58■■■□□ 2.65
CTSA-203ENST00000372459 RGS12O14924 1447 aa31.58■■■□□ 2.65
CTSA-203ENST00000372459 INTS3Q68E01 1043 aaKnown RBP31.57■■■□□ 2.65
CTSA-203ENST00000372459 STK31Q9BXU1 1019 aa31.57■■■□□ 2.65
CTSA-203ENST00000372459 CCDC30Q5VVM6 783 aa31.57■■■□□ 2.64
CTSA-203ENST00000372459 NLRP2Q9NX02 1062 aa31.57■■■□□ 2.64
CTSA-203ENST00000372459 FAM208AQ9UK61 1670 aaKnown RBP31.56■■■□□ 2.64
CTSA-203ENST00000372459 OVOS2A0A0G2JMS6 1433 aa31.56■■■□□ 2.64
CTSA-203ENST00000372459 TEFQ10587 303 aa31.55■■■□□ 2.64
CTSA-203ENST00000372459 RAPGEF4Q8WZA2 1011 aa31.54■■■□□ 2.64
CTSA-203ENST00000372459 RNMTO43148 476 aaKnown RBP31.54■■■□□ 2.64
CTSA-203ENST00000372459 CSB-PGBD3P0DP91 1061 aa31.54■■■□□ 2.64
CTSA-203ENST00000372459 ANP32AP39687 249 aaKnown RBP31.54■■■□□ 2.64
CTSA-203ENST00000372459 CHRNA2Q15822 529 aa31.54■■■□□ 2.64
CTSA-203ENST00000372459 MPRIPQ6WCQ1 1025 aa31.54■■■□□ 2.64
CTSA-203ENST00000372459 SMC5Q8IY18 1101 aa31.52■■■□□ 2.64
CTSA-203ENST00000372459 KDM3BQ7LBC6 1761 aa31.52■■■□□ 2.64
CTSA-203ENST00000372459 C8orf34Q49A92 452 aa31.5■■■□□ 2.63
CTSA-203ENST00000372459 VIRMAQ69YN4 1812 aaKnown RBP31.5■■■□□ 2.63
CTSA-203ENST00000372459 TATP17735 454 aaPredicted RBP31.5■■■□□ 2.63
CTSA-203ENST00000372459 PLEKHG2Q9H7P9 1386 aa31.49■■■□□ 2.63
CTSA-203ENST00000372459 CACNA1FO60840 1977 aa31.49■■■□□ 2.63
CTSA-203ENST00000372459 BTBD11A6QL63 1104 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms