RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
PCIF1-201ENST00000372409 GBP4Q96PP9 640 aa20.72■□□□□ 0.91
PCIF1-201ENST00000372409 PANK2Q9BZ23 570 aa20.72■□□□□ 0.91
PCIF1-201ENST00000372409 CIZ1Q9ULV3 898 aaPredicted RBP20.72■□□□□ 0.91
PCIF1-201ENST00000372409 SMARCA5O60264 1052 aaPredicted RBP20.72■□□□□ 0.91
PCIF1-201ENST00000372409 OTUD7AQ8TE49 926 aaPredicted RBP20.72■□□□□ 0.91
PCIF1-201ENST00000372409 NRKQ7Z2Y5 1582 aa20.71■□□□□ 0.91
PCIF1-201ENST00000372409 SLC4A2P04920 1241 aa20.71■□□□□ 0.91
PCIF1-201ENST00000372409 CEP85Q6P2H3 762 aa20.71■□□□□ 0.91
PCIF1-201ENST00000372409 SLC26A8Q96RN1 970 aa20.71■□□□□ 0.91
PCIF1-201ENST00000372409 MEIS3Q99687 375 aa20.71■□□□□ 0.91
PCIF1-201ENST00000372409 FOXO3O43524 673 aa20.7■□□□□ 0.9
PCIF1-201ENST00000372409 RAB3GAP1Q15042 981 aa20.7■□□□□ 0.9
PCIF1-201ENST00000372409 SLC4A10Q6U841 1118 aa20.7■□□□□ 0.9
PCIF1-201ENST00000372409 RPAP2Q8IXW5 612 aaPredicted RBP20.7■□□□□ 0.9
PCIF1-201ENST00000372409 OVOS2A0A0J9YW53 1432 aa20.7■□□□□ 0.9
PCIF1-201ENST00000372409 RGS12O14924 1447 aa20.7■□□□□ 0.9
PCIF1-201ENST00000372409 OVOS2Q6IE36 1432 aa20.7■□□□□ 0.9
PCIF1-201ENST00000372409 USP6P35125 1406 aa20.69■□□□□ 0.9
PCIF1-201ENST00000372409 ATP10DQ9P241 1426 aa20.69■□□□□ 0.9
PCIF1-201ENST00000372409 GAS2L2Q8NHY3 880 aa20.69■□□□□ 0.9
PCIF1-201ENST00000372409 RTF1Q92541 710 aaKnown RBP20.69■□□□□ 0.9
PCIF1-201ENST00000372409 PTPRCP08575 1304 aa20.69■□□□□ 0.9
PCIF1-201ENST00000372409 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.69■□□□□ 0.9
PCIF1-201ENST00000372409 PLEKHG3A1L390 1219 aa20.69■□□□□ 0.9
PCIF1-201ENST00000372409 LTKP29376 864 aa20.69■□□□□ 0.9
PCIF1-201ENST00000372409 ADAMTS13Q76LX8 1427 aa20.68■□□□□ 0.9
PCIF1-201ENST00000372409 KIAA0232Q92628 1395 aa20.68■□□□□ 0.9
PCIF1-201ENST00000372409 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
PCIF1-201ENST00000372409 RTL1A6NKG5 1358 aa20.68■□□□□ 0.9
PCIF1-201ENST00000372409 MAP3K19Q56UN5 1328 aa20.67■□□□□ 0.9
PCIF1-201ENST00000372409 PEAK1Q9H792 1746 aa20.66■□□□□ 0.9
PCIF1-201ENST00000372409 F6X3S4 739 aa20.66■□□□□ 0.9
PCIF1-201ENST00000372409 MTHFSDQ2M296 383 aaKnown RBP20.66■□□□□ 0.9
PCIF1-201ENST00000372409 UBR1Q8IWV7 1749 aa20.66■□□□□ 0.9
PCIF1-201ENST00000372409 SDSP20132 328 aa20.65■□□□□ 0.9
PCIF1-201ENST00000372409 MRE11P49959 708 aa20.65■□□□□ 0.9
PCIF1-201ENST00000372409 SSFA2P28290 1259 aa20.65■□□□□ 0.9
PCIF1-201ENST00000372409 CASC1Q6TDU7 716 aa20.65■□□□□ 0.9
PCIF1-201ENST00000372409 G2E3Q7L622 706 aa20.65■□□□□ 0.9
PCIF1-201ENST00000372409 RRAGDQ9NQL2 400 aaPredicted RBP20.65■□□□□ 0.9
PCIF1-201ENST00000372409 EIF5BO60841 1220 aaKnown RBP20.64■□□□□ 0.9
PCIF1-201ENST00000372409 CRB1P82279 1406 aa20.64■□□□□ 0.9
PCIF1-201ENST00000372409 AMPHP49418 695 aa20.64■□□□□ 0.89
PCIF1-201ENST00000372409 RABEP1Q15276 862 aa20.64■□□□□ 0.89
PCIF1-201ENST00000372409 NGDNQ8NEJ9 315 aaKnown RBP20.64■□□□□ 0.89
PCIF1-201ENST00000372409 USP26Q9BXU7 913 aa20.63■□□□□ 0.89
PCIF1-201ENST00000372409 GRPEL1Q9HAV7 217 aa20.63■□□□□ 0.89
PCIF1-201ENST00000372409 CEBPAP49715 358 aaPredicted RBP20.63■□□□□ 0.89
PCIF1-201ENST00000372409 USP31Q70CQ4 1352 aa20.62■□□□□ 0.89
PCIF1-201ENST00000372409 HMMRO75330 724 aa20.62■□□□□ 0.89
PCIF1-201ENST00000372409 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
PCIF1-201ENST00000372409 AMOTL2Q9Y2J4 779 aa20.62■□□□□ 0.89
PCIF1-201ENST00000372409 TOPAZ1Q8N9V7 1692 aa20.61■□□□□ 0.89
PCIF1-201ENST00000372409 ARHGEF10O15013 1369 aa20.61■□□□□ 0.89
PCIF1-201ENST00000372409 PLEKHG1Q9ULL1 1385 aa20.61■□□□□ 0.89
PCIF1-201ENST00000372409 EID1Q9Y6B2 187 aa20.61■□□□□ 0.89
PCIF1-201ENST00000372409 SKOR2Q2VWA4 1001 aaPredicted RBP20.6■□□□□ 0.89
PCIF1-201ENST00000372409 NECTIN2Q92692 538 aa20.6■□□□□ 0.89
PCIF1-201ENST00000372409 GOLGA6L22H0YM25 854 aa20.6■□□□□ 0.89
PCIF1-201ENST00000372409 RGPD1P0DJD0 1748 aa20.59■□□□□ 0.89
PCIF1-201ENST00000372409 PTPRUQ92729 1446 aa20.59■□□□□ 0.89
PCIF1-201ENST00000372409 EYA1Q99502 592 aa20.59■□□□□ 0.89
PCIF1-201ENST00000372409 STK31Q9BXU1 1019 aa20.59■□□□□ 0.89
PCIF1-201ENST00000372409 FLT4P35916 1363 aa20.59■□□□□ 0.89
PCIF1-201ENST00000372409 NALCNQ8IZF0 1738 aa20.59■□□□□ 0.89
PCIF1-201ENST00000372409 TTC21AQ8NDW8 1320 aa20.58■□□□□ 0.89
PCIF1-201ENST00000372409 PTMSP20962 102 aa20.58■□□□□ 0.89
PCIF1-201ENST00000372409 CCT4P50991 539 aaKnown RBP20.58■□□□□ 0.89
PCIF1-201ENST00000372409 AK9Q5TCS8 1911 aa20.58■□□□□ 0.89
PCIF1-201ENST00000372409 NUTM2GQ5VZR2 741 aa20.58■□□□□ 0.88
PCIF1-201ENST00000372409 EXOC6BQ9Y2D4 811 aa20.58■□□□□ 0.88
PCIF1-201ENST00000372409 SBNO1A3KN83 1393 aa20.57■□□□□ 0.88
PCIF1-201ENST00000372409 GAS2L3Q86XJ1 694 aa20.56■□□□□ 0.88
PCIF1-201ENST00000372409 REC8O95072 547 aa20.56■□□□□ 0.88
PCIF1-201ENST00000372409 FKBP5Q13451 457 aaPredicted RBP20.56■□□□□ 0.88
PCIF1-201ENST00000372409 SSH2Q76I76 1423 aa20.56■□□□□ 0.88
PCIF1-201ENST00000372409 GNAI2P04899 355 aa20.55■□□□□ 0.88
PCIF1-201ENST00000372409 NLRP6P59044 892 aa20.55■□□□□ 0.88
PCIF1-201ENST00000372409 TSHZ3Q63HK5 1081 aa20.55■□□□□ 0.88
PCIF1-201ENST00000372409 ST18O60284 1047 aa20.55■□□□□ 0.88
PCIF1-201ENST00000372409 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
PCIF1-201ENST00000372409 ISY1Q9ULR0 285 aaKnown RBP20.55■□□□□ 0.88
PCIF1-201ENST00000372409 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
PCIF1-201ENST00000372409 ERC2O15083 957 aa20.54■□□□□ 0.88
PCIF1-201ENST00000372409 PDE1AP54750 535 aa20.54■□□□□ 0.88
PCIF1-201ENST00000372409 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
PCIF1-201ENST00000372409 DDX49Q9Y6V7 483 aaKnown RBP20.54■□□□□ 0.88
PCIF1-201ENST00000372409 KIF13AQ9H1H9 1805 aa20.54■□□□□ 0.88
PCIF1-201ENST00000372409 CEP170BQ9Y4F5 1589 aaPredicted RBP20.54■□□□□ 0.88
PCIF1-201ENST00000372409 IGSF1Q8N6C5 1336 aa20.53■□□□□ 0.88
PCIF1-201ENST00000372409 FLIIQ13045 1269 aa20.53■□□□□ 0.88
PCIF1-201ENST00000372409 MCTP1Q6DN14 999 aa20.53■□□□□ 0.88
PCIF1-201ENST00000372409 KDRP35968 1356 aa20.52■□□□□ 0.88
PCIF1-201ENST00000372409 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.87
PCIF1-201ENST00000372409 GNAT3A8MTJ3 354 aa20.51■□□□□ 0.87
PCIF1-201ENST00000372409 NUCB2P80303 420 aa20.51■□□□□ 0.87
PCIF1-201ENST00000372409 PKP1Q13835 747 aa20.51■□□□□ 0.87
PCIF1-201ENST00000372409 RGPD8O14715 1765 aaPredicted RBP20.51■□□□□ 0.87
PCIF1-201ENST00000372409 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms