RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ZCRB1Q8TBF4 217 aaKnown RBP21.33■■□□□ 1.01
PFDN4-201ENST00000371419 KDRP35968 1356 aa21.33■■□□□ 1
PFDN4-201ENST00000371419 FAM182BQ5T319 152 aa21.32■■□□□ 1
PFDN4-201ENST00000371419 MARCH10Q8NA82 808 aaPredicted RBP21.32■■□□□ 1
PFDN4-201ENST00000371419 PLEKHG2Q9H7P9 1386 aa21.31■■□□□ 1
PFDN4-201ENST00000371419 EP400Q96L91 3159 aa21.31■■□□□ 1
PFDN4-201ENST00000371419 HMOX1P09601 288 aa21.31■■□□□ 1
PFDN4-201ENST00000371419 FAM196AQ6ZSG2 479 aa21.3■■□□□ 1
PFDN4-201ENST00000371419 DDX54Q8TDD1 881 aaKnown RBP21.29■■□□□ 1
PFDN4-201ENST00000371419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 11e-16■■■■□ 23.8
PFDN4-201ENST00000371419 SPG7Q9UQ90 795 aa21.29■■□□□ 1
PFDN4-201ENST00000371419 U2AF1L5P0DN76 240 aaPredicted RBP21.28■■□□□ 1
PFDN4-201ENST00000371419 U2AF1Q01081 240 aaKnown RBP eCLIP21.28■■□□□ 1
PFDN4-201ENST00000371419 MIER1Q8N108 512 aa21.28■■□□□ 1
PFDN4-201ENST00000371419 PKD1L3Q7Z443 1732 aa21.27■■□□□ 1
PFDN4-201ENST00000371419 PCDH11XQ9BZA7 1347 aa21.27■■□□□ 1
PFDN4-201ENST00000371419 PCDH11YQ9BZA8 1340 aa21.27■■□□□ 1
PFDN4-201ENST00000371419 PLEKHO1Q53GL0 409 aaPredicted RBP21.26■□□□□ 0.99
PFDN4-201ENST00000371419 SOCS7O14512 581 aa21.26■□□□□ 0.99
PFDN4-201ENST00000371419 AMOTQ4VCS5 1084 aa21.26■□□□□ 0.99
PFDN4-201ENST00000371419 SHANK3Q9BYB0 1731 aa21.25■□□□□ 0.99
PFDN4-201ENST00000371419 BCL9O00512 1426 aa21.25■□□□□ 0.99
PFDN4-201ENST00000371419 CYP27B1O15528 508 aa21.23■□□□□ 0.99
PFDN4-201ENST00000371419 FCHSD2O94868 740 aa21.23■□□□□ 0.99
PFDN4-201ENST00000371419 UPF1Q92900 1129 aaKnown RBP eCLIP21.23■□□□□ 0.99
PFDN4-201ENST00000371419 RSPH6AQ9H0K4 717 aa21.23■□□□□ 0.99
PFDN4-201ENST00000371419 PRKAR2BP31323 418 aa21.21■□□□□ 0.99
PFDN4-201ENST00000371419 ZNF530Q6P9A1 599 aaPredicted RBP21.2■□□□□ 0.98
PFDN4-201ENST00000371419 CCDC125Q86Z20 511 aa21.2■□□□□ 0.98
PFDN4-201ENST00000371419 IFNL2Q8IZJ0 200 aa21.2■□□□□ 0.98
PFDN4-201ENST00000371419 PHKG2P15735 406 aa21.2■□□□□ 0.98
PFDN4-201ENST00000371419 WDR43Q15061 677 aaKnown RBP eCLIP21.2■□□□□ 0.98
PFDN4-201ENST00000371419 TRIM37O94972 964 aa21.19■□□□□ 0.98
PFDN4-201ENST00000371419 NKX1-1Q15270 411 aaPredicted RBP21.18■□□□□ 0.98
PFDN4-201ENST00000371419 CCDC184Q52MB2 194 aa21.18■□□□□ 0.98
PFDN4-201ENST00000371419 PNNQ9H307 717 aaKnown RBP21.18■□□□□ 0.98
PFDN4-201ENST00000371419 SF3B2Q13435 895 aaKnown RBP21.17■□□□□ 0.98
PFDN4-201ENST00000371419 MTHFSDQ2M296 383 aaKnown RBP21.17■□□□□ 0.98
PFDN4-201ENST00000371419 C1orf141Q5JVX7 400 aa21.17■□□□□ 0.98
PFDN4-201ENST00000371419 ACSBG1Q96GR2 724 aa21.17■□□□□ 0.98
PFDN4-201ENST00000371419 SBF2Q86WG5 1849 aa21.17■□□□□ 0.98
PFDN4-201ENST00000371419 PHACTR3Q96KR7 559 aa21.16■□□□□ 0.98
PFDN4-201ENST00000371419 MRS2Q9HD23 443 aa21.16■□□□□ 0.98
PFDN4-201ENST00000371419 NEFMP07197 916 aa21.15■□□□□ 0.98
PFDN4-201ENST00000371419 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
PFDN4-201ENST00000371419 GAS2L2Q8NHY3 880 aa21.15■□□□□ 0.98
PFDN4-201ENST00000371419 BCL11BQ9C0K0 894 aaPredicted RBP21.15■□□□□ 0.98
PFDN4-201ENST00000371419 AKAP4Q5JQC9 854 aa21.14■□□□□ 0.98
PFDN4-201ENST00000371419 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.97
PFDN4-201ENST00000371419 KCNQ2O43526 872 aa21.13■□□□□ 0.97
PFDN4-201ENST00000371419 PLEKHF1Q96S99 279 aa21.13■□□□□ 0.97
PFDN4-201ENST00000371419 NHSQ6T4R5 1651 aa21.13■□□□□ 0.97
PFDN4-201ENST00000371419 PRIM1P49642 420 aaKnown RBP21.13■□□□□ 0.97
PFDN4-201ENST00000371419 DCAF5Q96JK2 942 aa21.13■□□□□ 0.97
PFDN4-201ENST00000371419 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
PFDN4-201ENST00000371419 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
PFDN4-201ENST00000371419 PTF1AQ7RTS3 328 aa21.12■□□□□ 0.97
PFDN4-201ENST00000371419 SYTL4Q96C24 671 aaPredicted RBP21.12■□□□□ 0.97
PFDN4-201ENST00000371419 TNS1Q9HBL0 1735 aaKnown RBP21.12■□□□□ 0.97
PFDN4-201ENST00000371419 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
PFDN4-201ENST00000371419 APBA3O96018 575 aa21.11■□□□□ 0.97
PFDN4-201ENST00000371419 CENPBP07199 599 aaPredicted RBP21.1■□□□□ 0.97
PFDN4-201ENST00000371419 MPRIPQ6WCQ1 1025 aa21.1■□□□□ 0.97
PFDN4-201ENST00000371419 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
PFDN4-201ENST00000371419 BAG6P46379 1132 aa21.09■□□□□ 0.97
PFDN4-201ENST00000371419 TOGARAM1Q9Y4F4 1720 aa21.09■□□□□ 0.97
PFDN4-201ENST00000371419 KDM6AO15550 1401 aaPredicted RBP21.08■□□□□ 0.97
PFDN4-201ENST00000371419 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.97
PFDN4-201ENST00000371419 MAP3K5Q99683 1374 aa21.08■□□□□ 0.97
PFDN4-201ENST00000371419 ERVV-2B6SEH9 535 aa21.07■□□□□ 0.96
PFDN4-201ENST00000371419 DEFB132Q7Z7B7 95 aa21.07■□□□□ 0.96
PFDN4-201ENST00000371419 CCDC146Q8IYE0 955 aa21.07■□□□□ 0.96
PFDN4-201ENST00000371419 RUNDC1Q96C34 613 aa21.07■□□□□ 0.96
PFDN4-201ENST00000371419 CCER2I3L3R5 266 aa21.06■□□□□ 0.96
PFDN4-201ENST00000371419 TMOD3Q9NYL9 352 aa21.06■□□□□ 0.96
PFDN4-201ENST00000371419 BTAF1O14981 1849 aa21.05■□□□□ 0.96
PFDN4-201ENST00000371419 RNMTO43148 476 aaKnown RBP21.05■□□□□ 0.96
PFDN4-201ENST00000371419 EN1Q05925 392 aaPredicted RBP21.05■□□□□ 0.96
PFDN4-201ENST00000371419 NFE2L2Q16236 605 aa21.05■□□□□ 0.96
PFDN4-201ENST00000371419 LGR6Q9HBX8 967 aa21.05■□□□□ 0.96
PFDN4-201ENST00000371419 ITGB4P16144 1822 aa21.04■□□□□ 0.96
PFDN4-201ENST00000371419 PLSCR1O15162 318 aa21.04■□□□□ 0.96
PFDN4-201ENST00000371419 CABP4P57796 275 aa21.04■□□□□ 0.96
PFDN4-201ENST00000371419 PIGBQ92521 554 aa21.04■□□□□ 0.96
PFDN4-201ENST00000371419 SCN11AQ9UI33 1791 aa21.04■□□□□ 0.96
PFDN4-201ENST00000371419 ADAMTS7Q9UKP4 1686 aa21.02■□□□□ 0.96
PFDN4-201ENST00000371419 HTATSF1O43719 755 aaKnown RBP21.02■□□□□ 0.96
PFDN4-201ENST00000371419 RTF1Q92541 710 aaKnown RBP21.02■□□□□ 0.96
PFDN4-201ENST00000371419 CAMKK2Q96RR4 588 aa21.02■□□□□ 0.96
PFDN4-201ENST00000371419 IL17REQ8NFR9 667 aa21.01■□□□□ 0.95
PFDN4-201ENST00000371419 TMPOP42166 694 aaKnown RBP21.01■□□□□ 0.95
PFDN4-201ENST00000371419 EZH2Q15910 746 aaKnown RBP21.01■□□□□ 0.95
PFDN4-201ENST00000371419 NFATC2IPQ8NCF5 419 aa21.01■□□□□ 0.95
PFDN4-201ENST00000371419 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
PFDN4-201ENST00000371419 FAM9BQ8IZU0 186 aa21■□□□□ 0.95
PFDN4-201ENST00000371419 RGPD3A6NKT7 1758 aaPredicted RBP20.99■□□□□ 0.95
PFDN4-201ENST00000371419 RGPD4Q7Z3J3 1758 aa20.99■□□□□ 0.95
PFDN4-201ENST00000371419 MRC1P22897 1456 aa20.99■□□□□ 0.95
PFDN4-201ENST00000371419 RIPK4P57078 832 aa20.99■□□□□ 0.95
PFDN4-201ENST00000371419 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms