RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MTERF4Q7Z6M4 381 aaKnown RBP14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 STK38Q15208 465 aa14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 CCDC57Q2TAC2 916 aa14.11□□□□□ -0.15
DEPDC1-201ENST00000370966 MYL6BP14649 208 aa14.1□□□□□ -0.15
DEPDC1-201ENST00000370966 STRN4Q9NRL3 753 aa14.1□□□□□ -0.15
DEPDC1-201ENST00000370966 ZSCAN25Q6NSZ9 544 aa14.1□□□□□ -0.15
DEPDC1-201ENST00000370966 MAP7D2Q96T17 732 aa14.1□□□□□ -0.15
DEPDC1-201ENST00000370966 CTNNA3Q9UI47 895 aa14.1□□□□□ -0.15
DEPDC1-201ENST00000370966 HMGN5P82970 282 aaKnown RBP14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 PDRG1Q9NUG6 133 aa14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 GNL3LQ9NVN8 582 aaKnown RBP14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 MIS18AQ9NYP9 233 aa14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 ASXL1Q8IXJ9 1541 aa14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 TNNT3P45378 269 aaPredicted RBP14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 BMP2KLQ5H9B9 411 aa14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 LARP1Q6PKG0 1096 aaKnown RBP14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 CWC27Q6UX04 472 aaKnown RBP14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 FBXW7Q969H0 707 aa14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 DHX8Q14562 1220 aaKnown RBP14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 ARHGAP45Q92619 1136 aa14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 NACAP1Q9BZK3 213 aa14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 AMOTL2Q9Y2J4 779 aa14.09□□□□□ -0.15
DEPDC1-201ENST00000370966 JAKMIP1Q96N16 626 aaKnown RBP14.08□□□□□ -0.15
DEPDC1-201ENST00000370966 R3HCC1Q9Y3T6 440 aaKnown RBP14.08□□□□□ -0.15
DEPDC1-201ENST00000370966 RAD21O60216 631 aa14.08□□□□□ -0.16
DEPDC1-201ENST00000370966 SLC3A2P08195 630 aaKnown RBP14.08□□□□□ -0.16
DEPDC1-201ENST00000370966 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
DEPDC1-201ENST00000370966 TESK2Q96S53 571 aa14.08□□□□□ -0.16
DEPDC1-201ENST00000370966 ARGLU1Q9NWB6 273 aaPredicted RBP14.08□□□□□ -0.16
DEPDC1-201ENST00000370966 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
DEPDC1-201ENST00000370966 CTTNBP2Q8WZ74 1663 aa14.08□□□□□ -0.16
DEPDC1-201ENST00000370966 MNS1Q8NEH6 495 aa14.08□□□□□ -0.16
DEPDC1-201ENST00000370966 MAP4K4O95819 1239 aaPredicted RBP14.07□□□□□ -0.16
DEPDC1-201ENST00000370966 CFAP45Q9UL16 551 aa14.07□□□□□ -0.16
DEPDC1-201ENST00000370966 SKAP1Q86WV1 359 aa14.07□□□□□ -0.16
DEPDC1-201ENST00000370966 TRIM22Q8IYM9 498 aa14.07□□□□□ -0.16
DEPDC1-201ENST00000370966 CFAP43Q8NDM7 1665 aa14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 ARHGEF12Q9NZN5 1544 aa14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 POLR3AO14802 1390 aaPredicted RBP14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 FYB1O15117 783 aa14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 ZC3H6P61129 1189 aaKnown RBP14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 SHANK2Q9UPX8 1470 aa14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 TNMDQ9H2S6 317 aa14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
DEPDC1-201ENST00000370966 NUTM1Q86Y26 1132 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 FAM177BA6PVY3 158 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 DNAAF4Q8WXU2 420 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 DBF4Q9UBU7 674 aaPredicted RBP14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 FLIIQ13045 1269 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 STK3Q13188 491 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 MPHOSPH8Q99549 860 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 TCEAL9Q9UHQ7 104 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 WDR62O43379 1518 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 SYCP2Q9BX26 1530 aa14.05□□□□□ -0.16
DEPDC1-201ENST00000370966 ME1P48163 572 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 CCP110O43303 1012 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 CDKL5O76039 1030 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 PIP4K2AP48426 406 aaPredicted RBP14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 RRP12Q5JTH9 1297 aaKnown RBP14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 CTDP1Q9Y5B0 961 aaPredicted RBP14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 A2MP01023 1474 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 F6X3S4 739 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 IGHDP01880 384 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 ATP2B1P20020 1258 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 TXLNAP40222 546 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 TEX35Q5T0J7 233 aa14.04□□□□□ -0.16
DEPDC1-201ENST00000370966 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 FKBP4Q02790 459 aaKnown RBP eCLIP14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 MBIPQ9NS73 344 aa14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 KIAA0556O60303 1618 aa14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 SPATA32Q96LK8 384 aa14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 PLEKHH1Q9ULM0 1364 aa14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 CEBPZQ03701 1054 aaKnown RBP14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 FMNL2Q96PY5 1086 aa14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 ESPNB1AK53 854 aa14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 CASTP20810 708 aaKnown RBP14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 XPCQ01831 940 aaPredicted RBP14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 TBC1D32Q96NH3 1257 aa14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 UPF3BQ9BZI7 483 aaKnown RBP14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 SH2B1Q9NRF2 756 aaPredicted RBP14.03□□□□□ -0.16
DEPDC1-201ENST00000370966 UBE2Q2Q8WVN8 375 aa14.02□□□□□ -0.16
DEPDC1-201ENST00000370966 HYPKQ9NX55 129 aa14.02□□□□□ -0.16
DEPDC1-201ENST00000370966 PIK3C2GO75747 1445 aa14.02□□□□□ -0.16
DEPDC1-201ENST00000370966 SMC2O95347 1197 aa14.02□□□□□ -0.16
DEPDC1-201ENST00000370966 LRRFIP2Q9Y608 721 aaKnown RBP14.02□□□□□ -0.17
DEPDC1-201ENST00000370966 EIF2AK4Q9P2K8 1649 aaKnown RBP14.02□□□□□ -0.17
DEPDC1-201ENST00000370966 STARD3NLO95772 234 aa14.02□□□□□ -0.17
DEPDC1-201ENST00000370966 PDILTQ8N807 584 aa14.02□□□□□ -0.17
DEPDC1-201ENST00000370966 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
DEPDC1-201ENST00000370966 NUP62CLQ9H1M0 184 aa14.01□□□□□ -0.17
DEPDC1-201ENST00000370966 ZNF518AQ6AHZ1 1483 aa14.01□□□□□ -0.17
DEPDC1-201ENST00000370966 PER1O15534 1290 aaPredicted RBP14.01□□□□□ -0.17
DEPDC1-201ENST00000370966 AKAP2Q9Y2D5 859 aa14.01□□□□□ -0.17
DEPDC1-201ENST00000370966 U3KPZ7 1027 aaPredicted RBP14.01□□□□□ -0.17
DEPDC1-201ENST00000370966 ACEP12821 1306 aa14.01□□□□□ -0.17
DEPDC1-201ENST00000370966 ACBD3Q9H3P7 528 aa14.01□□□□□ -0.17
DEPDC1-201ENST00000370966 TBC1D9Q6ZT07 1266 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms