RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 SEC24BO95487 1268 aa12.76□□□□□ -0.37
TPM3-209ENST00000368527 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
TPM3-209ENST00000368527 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
TPM3-209ENST00000368527 ZNF142P52746 1687 aaPredicted RBP12.76□□□□□ -0.37
TPM3-209ENST00000368527 PIK3C2AO00443 1686 aa12.75□□□□□ -0.37
TPM3-209ENST00000368527 CEBPAP49715 358 aaPredicted RBP12.75□□□□□ -0.37
TPM3-209ENST00000368527 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
TPM3-209ENST00000368527 ANKRD45Q5TZF3 282 aa12.75□□□□□ -0.37
TPM3-209ENST00000368527 ANKLE2Q86XL3 938 aa12.75□□□□□ -0.37
TPM3-209ENST00000368527 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
TPM3-209ENST00000368527 SNX21Q969T3 373 aa12.75□□□□□ -0.37
TPM3-209ENST00000368527 ADGRL3Q9HAR2 1447 aa12.74□□□□□ -0.37
TPM3-209ENST00000368527 GSE1Q14687 1217 aa12.74□□□□□ -0.37
TPM3-209ENST00000368527 AEBP1Q8IUX7 1158 aa12.74□□□□□ -0.37
TPM3-209ENST00000368527 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
TPM3-209ENST00000368527 IL27Q8NEV9 243 aa12.74□□□□□ -0.37
TPM3-209ENST00000368527 DCTPP1Q9H773 170 aa12.74□□□□□ -0.37
TPM3-209ENST00000368527 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
TPM3-209ENST00000368527 PTMSP20962 102 aa12.73□□□□□ -0.37
TPM3-209ENST00000368527 NLRP6P59044 892 aa12.73□□□□□ -0.37
TPM3-209ENST00000368527 STK31Q9BXU1 1019 aa12.73□□□□□ -0.37
TPM3-209ENST00000368527 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
TPM3-209ENST00000368527 TSPYL4Q9UJ04 414 aa12.73□□□□□ -0.37
TPM3-209ENST00000368527 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
TPM3-209ENST00000368527 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
TPM3-209ENST00000368527 CDC45O75419 566 aa12.72□□□□□ -0.37
TPM3-209ENST00000368527 SLC4A3P48751 1232 aa12.72□□□□□ -0.37
TPM3-209ENST00000368527 MFAP1P55081 439 aaKnown RBP12.72□□□□□ -0.37
TPM3-209ENST00000368527 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
TPM3-209ENST00000368527 KCNH5Q8NCM2 988 aa12.72□□□□□ -0.37
TPM3-209ENST00000368527 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
TPM3-209ENST00000368527 CHMP5Q9NZZ3 219 aa12.72□□□□□ -0.37
TPM3-209ENST00000368527 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
TPM3-209ENST00000368527 ELL2O00472 640 aaPredicted RBP12.71□□□□□ -0.37
TPM3-209ENST00000368527 CCDC30Q5VVM6 783 aa12.71□□□□□ -0.37
TPM3-209ENST00000368527 EYA1Q99502 592 aa12.71□□□□□ -0.37
TPM3-209ENST00000368527 PXDNLA1KZ92 1463 aa12.71□□□□□ -0.38
TPM3-209ENST00000368527 RGS12O14924 1447 aa12.71□□□□□ -0.38
TPM3-209ENST00000368527 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 CHD2O14647 1828 aaKnown RBP12.7□□□□□ -0.38
TPM3-209ENST00000368527 GNAI3P08754 354 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 HOXB7P09629 217 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 KCNA6P17658 529 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 HOXC9P31274 260 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 DCTN1Q14203 1278 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
TPM3-209ENST00000368527 MCM10Q7L590 875 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 ANTXR1Q9H6X2 564 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
TPM3-209ENST00000368527 PHRF1Q9P1Y6 1649 aaKnown RBP12.7□□□□□ -0.38
TPM3-209ENST00000368527 SIRT2Q8IXJ6 389 aa12.69□□□□□ -0.38
TPM3-209ENST00000368527 ATP10DQ9P241 1426 aa12.69□□□□□ -0.38
TPM3-209ENST00000368527 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
TPM3-209ENST00000368527 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
TPM3-209ENST00000368527 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
TPM3-209ENST00000368527 TAF7Q15545 349 aaPredicted RBP12.68□□□□□ -0.38
TPM3-209ENST00000368527 ABTB2Q8N961 1025 aa12.68□□□□□ -0.38
TPM3-209ENST00000368527 IP6K1Q92551 441 aa12.68□□□□□ -0.38
TPM3-209ENST00000368527 BCL11AQ9H165 835 aa12.68□□□□□ -0.38
TPM3-209ENST00000368527 OVOS2A0A0G2JMS6 1433 aa12.68□□□□□ -0.38
TPM3-209ENST00000368527 MSH6P52701 1360 aa12.68□□□□□ -0.38
TPM3-209ENST00000368527 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
TPM3-209ENST00000368527 CEP85Q6P2H3 762 aa12.67□□□□□ -0.38
TPM3-209ENST00000368527 NCAPD2Q15021 1401 aa12.67□□□□□ -0.38
TPM3-209ENST00000368527 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
TPM3-209ENST00000368527 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
TPM3-209ENST00000368527 CACNA1FO60840 1977 aa12.67□□□□□ -0.38
TPM3-209ENST00000368527 NWD1Q149M9 1564 aa12.66□□□□□ -0.38
TPM3-209ENST00000368527 GNAI2P04899 355 aa12.66□□□□□ -0.38
TPM3-209ENST00000368527 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
TPM3-209ENST00000368527 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
TPM3-209ENST00000368527 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.38
TPM3-209ENST00000368527 FRAT2O75474 233 aaPredicted RBP12.65□□□□□ -0.38
TPM3-209ENST00000368527 AMOTQ4VCS5 1084 aa12.65□□□□□ -0.38
TPM3-209ENST00000368527 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
TPM3-209ENST00000368527 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
TPM3-209ENST00000368527 PLEKHM2Q8IWE5 1019 aa12.65□□□□□ -0.38
TPM3-209ENST00000368527 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
TPM3-209ENST00000368527 RGPD8O14715 1765 aaPredicted RBP12.65□□□□□ -0.38
TPM3-209ENST00000368527 SETD1BQ9UPS6 1966 aaKnown RBP12.65□□□□□ -0.38
TPM3-209ENST00000368527 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
TPM3-209ENST00000368527 NFAT5O94916 1531 aa12.64□□□□□ -0.39
TPM3-209ENST00000368527 EPB41L2O43491 1005 aaKnown RBP12.64□□□□□ -0.39
TPM3-209ENST00000368527 REC8O95072 547 aa12.64□□□□□ -0.39
TPM3-209ENST00000368527 L1TD1Q5T7N2 865 aaKnown RBP12.64□□□□□ -0.39
TPM3-209ENST00000368527 SRCIN1Q9C0H9 1055 aa12.64□□□□□ -0.39
TPM3-209ENST00000368527 ISY1Q9ULR0 285 aaKnown RBP12.64□□□□□ -0.39
TPM3-209ENST00000368527 ADAMTSL3P82987 1691 aa12.64□□□□□ -0.39
TPM3-209ENST00000368527 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
TPM3-209ENST00000368527 NPHP4O75161 1426 aaPredicted RBP12.63□□□□□ -0.39
TPM3-209ENST00000368527 MST1RQ04912 1400 aa12.63□□□□□ -0.39
TPM3-209ENST00000368527 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
TPM3-209ENST00000368527 RABEP1Q15276 862 aa12.63□□□□□ -0.39
TPM3-209ENST00000368527 SLKQ9H2G2 1235 aaPredicted RBP12.63□□□□□ -0.39
TPM3-209ENST00000368527 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
TPM3-209ENST00000368527 AOX1Q06278 1338 aa12.62□□□□□ -0.39
TPM3-209ENST00000368527 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
TPM3-209ENST00000368527 MED1Q15648 1581 aaPredicted RBP12.62□□□□□ -0.39
TPM3-209ENST00000368527 SOX12O15370 315 aa12.62□□□□□ -0.39
TPM3-209ENST00000368527 PSME1Q06323 249 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms