RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 CRB1P82279 1406 aa19.22■□□□□ 0.67
NEK2-201ENST00000366998 GNAT3A8MTJ3 354 aa19.22■□□□□ 0.67
NEK2-201ENST00000366998 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
NEK2-201ENST00000366998 TSPYL6Q8N831 410 aa19.22■□□□□ 0.67
NEK2-201ENST00000366998 AXIN2Q9Y2T1 843 aa19.22■□□□□ 0.67
NEK2-201ENST00000366998 MAP3K5Q99683 1374 aa19.21■□□□□ 0.67
NEK2-201ENST00000366998 TWISTNBQ3B726 338 aaPredicted RBP19.21■□□□□ 0.67
NEK2-201ENST00000366998 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
NEK2-201ENST00000366998 KIF16BQ96L93 1317 aa19.2■□□□□ 0.66
NEK2-201ENST00000366998 CAMTA1Q9Y6Y1 1673 aa19.2■□□□□ 0.66
NEK2-201ENST00000366998 HTATSF1O43719 755 aaKnown RBP19.2■□□□□ 0.66
NEK2-201ENST00000366998 VAMP4O75379 141 aa19.2■□□□□ 0.66
NEK2-201ENST00000366998 RLBP1P12271 317 aa19.2■□□□□ 0.66
NEK2-201ENST00000366998 LRRC37A3O60309 1634 aa19.2■□□□□ 0.66
NEK2-201ENST00000366998 CHL1O00533 1208 aa19.2■□□□□ 0.66
NEK2-201ENST00000366998 MS4A1P11836 297 aa19.2■□□□□ 0.66
NEK2-201ENST00000366998 C8orf58Q8NAV2 365 aa19.2■□□□□ 0.66
NEK2-201ENST00000366998 NOB1Q9ULX3 412 aaKnown RBP19.2■□□□□ 0.66
NEK2-201ENST00000366998 DZIP1LQ8IYY4 767 aaKnown RBP19.19■□□□□ 0.66
NEK2-201ENST00000366998 COL18A1P39060 1754 aa19.19■□□□□ 0.66
NEK2-201ENST00000366998 SOS2Q07890 1332 aaPredicted RBP19.18■□□□□ 0.66
NEK2-201ENST00000366998 IPO8O15397 1037 aaKnown RBP19.18■□□□□ 0.66
NEK2-201ENST00000366998 NHSL1Q5SYE7 1610 aa19.18■□□□□ 0.66
NEK2-201ENST00000366998 ERBB3P21860 1342 aa19.17■□□□□ 0.66
NEK2-201ENST00000366998 NCAPD2Q15021 1401 aa19.17■□□□□ 0.66
NEK2-201ENST00000366998 TRIM27P14373 513 aa19.17■□□□□ 0.66
NEK2-201ENST00000366998 ATF7IPQ6VMQ6 1270 aa19.17■□□□□ 0.66
NEK2-201ENST00000366998 TSPYL4Q9UJ04 414 aa19.17■□□□□ 0.66
NEK2-201ENST00000366998 MIS18AQ9NYP9 233 aa19.16■□□□□ 0.66
NEK2-201ENST00000366998 CHRNA2Q15822 529 aa19.16■□□□□ 0.66
NEK2-201ENST00000366998 KIAA0232Q92628 1395 aa19.15■□□□□ 0.66
NEK2-201ENST00000366998 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
NEK2-201ENST00000366998 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
NEK2-201ENST00000366998 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
NEK2-201ENST00000366998 MRPL50Q8N5N7 158 aaKnown RBP19.15■□□□□ 0.66
NEK2-201ENST00000366998 ABCC6O95255 1503 aa19.15■□□□□ 0.66
NEK2-201ENST00000366998 LMO7Q8WWI1 1683 aa19.15■□□□□ 0.66
NEK2-201ENST00000366998 KRT24Q2M2I5 525 aa19.14■□□□□ 0.65
NEK2-201ENST00000366998 FAM208AQ9UK61 1670 aaKnown RBP19.14■□□□□ 0.65
NEK2-201ENST00000366998 CSB-PGBD3P0DP91 1061 aa19.14■□□□□ 0.65
NEK2-201ENST00000366998 HAP1P54257 671 aaPredicted RBP19.14■□□□□ 0.65
NEK2-201ENST00000366998 BRPF1P55201 1214 aaPredicted RBP19.14■□□□□ 0.65
NEK2-201ENST00000366998 ZNF530Q6P9A1 599 aaPredicted RBP19.14■□□□□ 0.65
NEK2-201ENST00000366998 CENPQQ7L2Z9 268 aaPredicted RBP19.14■□□□□ 0.65
NEK2-201ENST00000366998 IL17REQ8NFR9 667 aa19.14■□□□□ 0.65
NEK2-201ENST00000366998 NLRP2Q9NX02 1062 aa19.14■□□□□ 0.65
NEK2-201ENST00000366998 VIRMAQ69YN4 1812 aaKnown RBP19.13■□□□□ 0.65
NEK2-201ENST00000366998 CPDO75976 1380 aa19.13■□□□□ 0.65
NEK2-201ENST00000366998 ABCA3Q99758 1704 aa19.13■□□□□ 0.65
NEK2-201ENST00000366998 KDM2BQ8NHM5 1336 aa19.13■□□□□ 0.65
NEK2-201ENST00000366998 AAMPQ13685 434 aa19.12■□□□□ 0.65
NEK2-201ENST00000366998 AMOTQ4VCS5 1084 aa19.12■□□□□ 0.65
NEK2-201ENST00000366998 ITPRIPQ8IWB1 547 aa19.11■□□□□ 0.65
NEK2-201ENST00000366998 AKAP4Q5JQC9 854 aa19.1■□□□□ 0.65
NEK2-201ENST00000366998 C1orf141Q5JVX7 400 aa19.1■□□□□ 0.65
NEK2-201ENST00000366998 TAF7Q15545 349 aaPredicted RBP19.09■□□□□ 0.65
NEK2-201ENST00000366998 TMEM57Q8N5G2 664 aa19.09■□□□□ 0.65
NEK2-201ENST00000366998 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
NEK2-201ENST00000366998 RAPGEF4Q8WZA2 1011 aa19.09■□□□□ 0.65
NEK2-201ENST00000366998 DDX19BQ9UMR2 479 aa19.09■□□□□ 0.65
NEK2-201ENST00000366998 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
NEK2-201ENST00000366998 ARHGAP45Q92619 1136 aa19.08■□□□□ 0.65
NEK2-201ENST00000366998 LTBP4Q8N2S1 1624 aa19.07■□□□□ 0.64
NEK2-201ENST00000366998 CEMIPQ8WUJ3 1361 aa19.07■□□□□ 0.64
NEK2-201ENST00000366998 LGR6Q9HBX8 967 aa19.07■□□□□ 0.64
NEK2-201ENST00000366998 BABAM1Q9NWV8 329 aa19.07■□□□□ 0.64
NEK2-201ENST00000366998 TATP17735 454 aaPredicted RBP19.06■□□□□ 0.64
NEK2-201ENST00000366998 MPRIPQ6WCQ1 1025 aa19.06■□□□□ 0.64
NEK2-201ENST00000366998 TEFQ10587 303 aa19.05■□□□□ 0.64
NEK2-201ENST00000366998 IGHDP01880 384 aa19.05■□□□□ 0.64
NEK2-201ENST00000366998 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
NEK2-201ENST00000366998 PCDHB15Q9Y5E8 787 aa19.04■□□□□ 0.64
NEK2-201ENST00000366998 KDM3BQ7LBC6 1761 aa19.04■□□□□ 0.64
NEK2-201ENST00000366998 MEGF6O75095 1541 aa19.03■□□□□ 0.64
NEK2-201ENST00000366998 RNMTO43148 476 aaKnown RBP19.03■□□□□ 0.64
NEK2-201ENST00000366998 SKAP1Q86WV1 359 aa19.03■□□□□ 0.64
NEK2-201ENST00000366998 ABCC4O15439 1325 aa19.02■□□□□ 0.64
NEK2-201ENST00000366998 RBM19Q9Y4C8 960 aaKnown RBP19.02■□□□□ 0.64
NEK2-201ENST00000366998 OVOS2A0A0G2JMS6 1433 aa19.02■□□□□ 0.64
NEK2-201ENST00000366998 SPG7Q9UQ90 795 aa19.01■□□□□ 0.63
NEK2-201ENST00000366998 SLC4A2P04920 1241 aa19.01■□□□□ 0.63
NEK2-201ENST00000366998 AHDC1Q5TGY3 1603 aaPredicted RBP19■□□□□ 0.63
NEK2-201ENST00000366998 COL5A2P05997 1499 aaPredicted RBP19■□□□□ 0.63
NEK2-201ENST00000366998 WDR17Q8IZU2 1322 aa19■□□□□ 0.63
NEK2-201ENST00000366998 STK31Q9BXU1 1019 aa19■□□□□ 0.63
NEK2-201ENST00000366998 PKD1L3Q7Z443 1732 aa19■□□□□ 0.63
NEK2-201ENST00000366998 SCN11AQ9UI33 1791 aa19■□□□□ 0.63
NEK2-201ENST00000366998 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
NEK2-201ENST00000366998 TOM1L2Q6ZVM7 507 aa18.99■□□□□ 0.63
NEK2-201ENST00000366998 RWDD1Q9H446 243 aaPredicted RBP18.99■□□□□ 0.63
NEK2-201ENST00000366998 ADAMTS7Q9UKP4 1686 aa18.99■□□□□ 0.63
NEK2-201ENST00000366998 SIPA1L3O60292 1781 aaPredicted RBP18.99■□□□□ 0.63
NEK2-201ENST00000366998 CACNA1FO60840 1977 aa18.99■□□□□ 0.63
NEK2-201ENST00000366998 SOS1Q07889 1333 aaPredicted RBP18.99■□□□□ 0.63
NEK2-201ENST00000366998 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
NEK2-201ENST00000366998 CHMP4BQ9H444 224 aaKnown RBP18.99■□□□□ 0.63
NEK2-201ENST00000366998 ZBTB40Q9NUA8 1239 aa18.99■□□□□ 0.63
NEK2-201ENST00000366998 PARP4Q9UKK3 1724 aaKnown RBP18.98■□□□□ 0.63
NEK2-201ENST00000366998 PTPRCP08575 1304 aa18.98■□□□□ 0.63
NEK2-201ENST00000366998 NECTIN2Q92692 538 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms