RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 PIK3R4Q99570 1358 aa13.24□□□□□ -0.29
SMC3-201ENST00000361804 XIRP1Q702N8 1843 aaKnown RBP13.24□□□□□ -0.29
SMC3-201ENST00000361804 SOX12O15370 315 aa13.24□□□□□ -0.29
SMC3-201ENST00000361804 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
SMC3-201ENST00000361804 AEBP1Q8IUX7 1158 aa13.24□□□□□ -0.29
SMC3-201ENST00000361804 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
SMC3-201ENST00000361804 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
SMC3-201ENST00000361804 CHAMP1Q96JM3 812 aa13.23□□□□□ -0.29
SMC3-201ENST00000361804 SSFA2P28290 1259 aa13.23□□□□□ -0.29
SMC3-201ENST00000361804 GAS2L2Q8NHY3 880 aa13.23□□□□□ -0.29
SMC3-201ENST00000361804 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
SMC3-201ENST00000361804 SIPA1L3O60292 1781 aaPredicted RBP13.23□□□□□ -0.29
SMC3-201ENST00000361804 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
SMC3-201ENST00000361804 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
SMC3-201ENST00000361804 AK9Q5TCS8 1911 aa13.22□□□□□ -0.29
SMC3-201ENST00000361804 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
SMC3-201ENST00000361804 ACEP12821 1306 aa13.22□□□□□ -0.29
SMC3-201ENST00000361804 DDIT3P35638 169 aa13.22□□□□□ -0.29
SMC3-201ENST00000361804 CRB1P82279 1406 aa13.22□□□□□ -0.29
SMC3-201ENST00000361804 MED1Q15648 1581 aaPredicted RBP13.21□□□□□ -0.29
SMC3-201ENST00000361804 SMARCA5O60264 1052 aaPredicted RBP13.21□□□□□ -0.29
SMC3-201ENST00000361804 FCHSD2O94868 740 aa13.21□□□□□ -0.29
SMC3-201ENST00000361804 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
SMC3-201ENST00000361804 NFE2L2Q16236 605 aa13.21□□□□□ -0.29
SMC3-201ENST00000361804 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
SMC3-201ENST00000361804 IL16Q14005 1332 aa13.21□□□□□ -0.29
SMC3-201ENST00000361804 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.3
SMC3-201ENST00000361804 GRPEL1Q9HAV7 217 aa13.21□□□□□ -0.3
SMC3-201ENST00000361804 NAP1L5Q96NT1 182 aaPredicted RBP13.2□□□□□ -0.3
SMC3-201ENST00000361804 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
SMC3-201ENST00000361804 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
SMC3-201ENST00000361804 BMP2KLQ5H9B9 411 aa13.2□□□□□ -0.3
SMC3-201ENST00000361804 PKP1Q13835 747 aa13.2□□□□□ -0.3
SMC3-201ENST00000361804 ALDH1L2Q3SY69 923 aa13.2□□□□□ -0.3
SMC3-201ENST00000361804 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
SMC3-201ENST00000361804 EIF4A2Q14240 407 aaKnown RBP13.19□□□□□ -0.3
SMC3-201ENST00000361804 LMO7Q8WWI1 1683 aa13.19□□□□□ -0.3
SMC3-201ENST00000361804 KDRP35968 1356 aa13.18□□□□□ -0.3
SMC3-201ENST00000361804 ADAMTS7Q9UKP4 1686 aa13.18□□□□□ -0.3
SMC3-201ENST00000361804 BRPF1P55201 1214 aaPredicted RBP13.18□□□□□ -0.3
SMC3-201ENST00000361804 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMC3-201ENST00000361804 MCM10Q7L590 875 aa13.17□□□□□ -0.3
SMC3-201ENST00000361804 ALS2Q96Q42 1657 aa13.17□□□□□ -0.3
SMC3-201ENST00000361804 NCOA3Q9Y6Q9 1424 aa13.17□□□□□ -0.3
SMC3-201ENST00000361804 HSP90AB2PQ58FF8 381 aa13.17□□□□□ -0.3
SMC3-201ENST00000361804 FOXD4L5Q5VV16 416 aaPredicted RBP13.17□□□□□ -0.3
SMC3-201ENST00000361804 TSHZ3Q63HK5 1081 aa13.17□□□□□ -0.3
SMC3-201ENST00000361804 FOXD4L4Q8WXT5 416 aaPredicted RBP13.17□□□□□ -0.3
SMC3-201ENST00000361804 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
SMC3-201ENST00000361804 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
SMC3-201ENST00000361804 K7ELQ4 463 aaPredicted RBP13.16□□□□□ -0.3
SMC3-201ENST00000361804 SNX21Q969T3 373 aa13.16□□□□□ -0.3
SMC3-201ENST00000361804 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
SMC3-201ENST00000361804 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
SMC3-201ENST00000361804 MRE11P49959 708 aa13.15□□□□□ -0.3
SMC3-201ENST00000361804 ABCC4O15439 1325 aa13.15□□□□□ -0.3
SMC3-201ENST00000361804 COL18A1P39060 1754 aa13.15□□□□□ -0.3
SMC3-201ENST00000361804 SETD1BQ9UPS6 1966 aaKnown RBP13.15□□□□□ -0.31
SMC3-201ENST00000361804 GNAI1P63096 354 aa13.15□□□□□ -0.31
SMC3-201ENST00000361804 PNNQ9H307 717 aaKnown RBP13.15□□□□□ -0.31
SMC3-201ENST00000361804 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
SMC3-201ENST00000361804 KCNA6P17658 529 aa13.14□□□□□ -0.31
SMC3-201ENST00000361804 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
SMC3-201ENST00000361804 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
SMC3-201ENST00000361804 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
SMC3-201ENST00000361804 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
SMC3-201ENST00000361804 GLI3P10071 1580 aa13.13□□□□□ -0.31
SMC3-201ENST00000361804 FOXO3O43524 673 aa13.13□□□□□ -0.31
SMC3-201ENST00000361804 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
SMC3-201ENST00000361804 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
SMC3-201ENST00000361804 MEIS3Q99687 375 aa13.13□□□□□ -0.31
SMC3-201ENST00000361804 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
SMC3-201ENST00000361804 F6X3S4 739 aa13.12□□□□□ -0.31
SMC3-201ENST00000361804 CDC45O75419 566 aa13.12□□□□□ -0.31
SMC3-201ENST00000361804 MCTP1Q6DN14 999 aa13.12□□□□□ -0.31
SMC3-201ENST00000361804 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
SMC3-201ENST00000361804 MSH6P52701 1360 aa13.12□□□□□ -0.31
SMC3-201ENST00000361804 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
SMC3-201ENST00000361804 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
SMC3-201ENST00000361804 GBP4Q96PP9 640 aa13.11□□□□□ -0.31
SMC3-201ENST00000361804 NCAPD2Q15021 1401 aa13.11□□□□□ -0.31
SMC3-201ENST00000361804 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
SMC3-201ENST00000361804 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
SMC3-201ENST00000361804 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
SMC3-201ENST00000361804 ANKARQ7Z5J8 1434 aa13.1□□□□□ -0.31
SMC3-201ENST00000361804 ESPNB1AK53 854 aa13.1□□□□□ -0.31
SMC3-201ENST00000361804 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
SMC3-201ENST00000361804 COG3Q96JB2 828 aa13.1□□□□□ -0.31
SMC3-201ENST00000361804 SLIT3O75094 1523 aa13.1□□□□□ -0.31
SMC3-201ENST00000361804 SDSP20132 328 aa13.1□□□□□ -0.31
SMC3-201ENST00000361804 CLCN1P35523 988 aa13.1□□□□□ -0.31
SMC3-201ENST00000361804 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
SMC3-201ENST00000361804 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
SMC3-201ENST00000361804 TTC22Q5TAA0 569 aa13.1□□□□□ -0.31
SMC3-201ENST00000361804 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
SMC3-201ENST00000361804 G2E3Q7L622 706 aa13.1□□□□□ -0.31
SMC3-201ENST00000361804 CACNA1FO60840 1977 aa13.09□□□□□ -0.31
SMC3-201ENST00000361804 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
SMC3-201ENST00000361804 ARHGAP45Q92619 1136 aa13.09□□□□□ -0.31
SMC3-201ENST00000361804 DTNBO60941 627 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms