RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.27
CTR9-201ENST00000361367 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.27
CTR9-201ENST00000361367 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 AEBP1Q8IUX7 1158 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 TMEM2Q9UHN6 1383 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 AACSQ86V21 672 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 MBIPQ9NS73 344 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 GCP02774 474 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 ZNF652Q9Y2D9 606 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 TRPM2O94759 1503 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
CTR9-201ENST00000361367 MYD88Q99836 296 aa16.75■□□□□ 0.27
CTR9-201ENST00000361367 EXOC6BQ9Y2D4 811 aa16.75■□□□□ 0.27
CTR9-201ENST00000361367 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
CTR9-201ENST00000361367 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
CTR9-201ENST00000361367 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
CTR9-201ENST00000361367 FLT4P35916 1363 aa16.75■□□□□ 0.27
CTR9-201ENST00000361367 FLIIQ13045 1269 aa16.74■□□□□ 0.27
CTR9-201ENST00000361367 IL16Q14005 1332 aa16.74■□□□□ 0.27
CTR9-201ENST00000361367 C20orf194Q5TEA3 1177 aa16.74■□□□□ 0.27
CTR9-201ENST00000361367 DDX49Q9Y6V7 483 aaKnown RBP16.74■□□□□ 0.27
CTR9-201ENST00000361367 PSMA5P28066 241 aa16.74■□□□□ 0.27
CTR9-201ENST00000361367 TPM4P67936 248 aa16.74■□□□□ 0.27
CTR9-201ENST00000361367 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
CTR9-201ENST00000361367 ZPR1O75312 459 aa16.73■□□□□ 0.27
CTR9-201ENST00000361367 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
CTR9-201ENST00000361367 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.73■□□□□ 0.27
CTR9-201ENST00000361367 CTDP1Q9Y5B0 961 aaPredicted RBP16.73■□□□□ 0.27
CTR9-201ENST00000361367 CFAP74Q9C0B2 1584 aa16.73■□□□□ 0.27
CTR9-201ENST00000361367 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
CTR9-201ENST00000361367 POLR3AO14802 1390 aaPredicted RBP16.73■□□□□ 0.27
CTR9-201ENST00000361367 PHF14O94880 888 aa16.72■□□□□ 0.27
CTR9-201ENST00000361367 LTKP29376 864 aa16.72■□□□□ 0.27
CTR9-201ENST00000361367 MSNP26038 577 aaKnown RBP16.72■□□□□ 0.27
CTR9-201ENST00000361367 LRRC59Q96AG4 307 aaKnown RBP16.72■□□□□ 0.27
CTR9-201ENST00000361367 CHMP5Q9NZZ3 219 aa16.72■□□□□ 0.27
CTR9-201ENST00000361367 TRIM27P14373 513 aa16.72■□□□□ 0.27
CTR9-201ENST00000361367 DEKP35659 375 aaKnown RBP16.72■□□□□ 0.27
CTR9-201ENST00000361367 IGHMBP2P38935 993 aaKnown RBP16.72■□□□□ 0.27
CTR9-201ENST00000361367 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
CTR9-201ENST00000361367 GOLGA6L3A6NEY3 463 aa16.71■□□□□ 0.27
CTR9-201ENST00000361367 ORAI2Q96SN7 254 aa16.71■□□□□ 0.27
CTR9-201ENST00000361367 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
CTR9-201ENST00000361367 PER1O15534 1290 aaPredicted RBP16.71■□□□□ 0.27
CTR9-201ENST00000361367 FKBP4Q02790 459 aaKnown RBP eCLIP16.71■□□□□ 0.27
CTR9-201ENST00000361367 NEK4P51957 841 aa16.7■□□□□ 0.26
CTR9-201ENST00000361367 ZBTB3Q9H5J0 574 aa16.7■□□□□ 0.26
CTR9-201ENST00000361367 TTC37Q6PGP7 1564 aa16.7■□□□□ 0.26
CTR9-201ENST00000361367 SAMD9LQ8IVG5 1584 aa16.7■□□□□ 0.26
CTR9-201ENST00000361367 HSP90AB3PQ58FF7 597 aa16.7■□□□□ 0.26
CTR9-201ENST00000361367 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
CTR9-201ENST00000361367 PTPRCP08575 1304 aa16.7■□□□□ 0.26
CTR9-201ENST00000361367 MAP4K4O95819 1239 aaPredicted RBP16.7■□□□□ 0.26
CTR9-201ENST00000361367 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
CTR9-201ENST00000361367 KIF1BPQ96EK5 621 aa16.69■□□□□ 0.26
CTR9-201ENST00000361367 LMTK3Q96Q04 1460 aa16.69■□□□□ 0.26
CTR9-201ENST00000361367 MLH3Q9UHC1 1453 aa16.69■□□□□ 0.26
CTR9-201ENST00000361367 SART3Q15020 963 aaKnown RBP16.69■□□□□ 0.26
CTR9-201ENST00000361367 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
CTR9-201ENST00000361367 C8orf37Q96NL8 207 aa16.69■□□□□ 0.26
CTR9-201ENST00000361367 A0A087WZG4 1122 aa16.69■□□□□ 0.26
CTR9-201ENST00000361367 TRMT112Q9UI30 125 aaKnown RBP16.69■□□□□ 0.26
CTR9-201ENST00000361367 ZCCHC11Q5TAX3 1644 aaKnown RBP16.68■□□□□ 0.26
CTR9-201ENST00000361367 NUCB2P80303 420 aa16.68■□□□□ 0.26
CTR9-201ENST00000361367 AKAP4Q5JQC9 854 aa16.68■□□□□ 0.26
CTR9-201ENST00000361367 EYA1Q99502 592 aa16.68■□□□□ 0.26
CTR9-201ENST00000361367 METTL24Q5JXM2 366 aa16.68■□□□□ 0.26
CTR9-201ENST00000361367 ANXA1P04083 346 aa16.67■□□□□ 0.26
CTR9-201ENST00000361367 PI4KAP2A4QPH2 592 aa16.67■□□□□ 0.26
CTR9-201ENST00000361367 SAFBQ15424 915 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTR9-201ENST00000361367 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
CTR9-201ENST00000361367 SAMD1Q6SPF0 538 aaPredicted RBP16.67■□□□□ 0.26
CTR9-201ENST00000361367 PI4KAP1Q8N8J0 262 aa16.67■□□□□ 0.26
CTR9-201ENST00000361367 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
CTR9-201ENST00000361367 CREBRFQ8IUR6 639 aa16.67■□□□□ 0.26
CTR9-201ENST00000361367 MAGI2Q86UL8 1455 aa16.67■□□□□ 0.26
CTR9-201ENST00000361367 GPTP24298 496 aa16.67■□□□□ 0.26
CTR9-201ENST00000361367 NUTM1Q86Y26 1132 aa16.67■□□□□ 0.26
CTR9-201ENST00000361367 FOSBP53539 338 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 CHAF1AQ13111 956 aaPredicted RBP16.66■□□□□ 0.26
CTR9-201ENST00000361367 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
CTR9-201ENST00000361367 MTMR7Q9Y216 660 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 HOXC9P31274 260 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 IP6K1Q92551 441 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 MAP3K2Q9Y2U5 619 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 IL2RBP14784 551 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 RABEP1Q15276 862 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 SKOR2Q2VWA4 1001 aaPredicted RBP16.66■□□□□ 0.26
CTR9-201ENST00000361367 ZFYVE9O95405 1425 aa16.66■□□□□ 0.26
CTR9-201ENST00000361367 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
CTR9-201ENST00000361367 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
CTR9-201ENST00000361367 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
CTR9-201ENST00000361367 NACAP1Q9BZK3 213 aa16.65■□□□□ 0.26
CTR9-201ENST00000361367 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
CTR9-201ENST00000361367 IFIT5Q13325 482 aaKnown RBP16.65■□□□□ 0.26
CTR9-201ENST00000361367 DDB1Q16531 1140 aa16.65■□□□□ 0.26
CTR9-201ENST00000361367 RAB11FIP3O75154 756 aa16.65■□□□□ 0.26
CTR9-201ENST00000361367 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
CTR9-201ENST00000361367 RTN4Q9NQC3 1192 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms