RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 MAATS1Q7Z4T9 603 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 FGFR1OPO95684 399 aaKnown RBP9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 FKBP15Q5T1M5 1219 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 TDO2P48775 406 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 LARP1Q6PKG0 1096 aaKnown RBP9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 CCDC150Q8NCX0 1101 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 PAIP2Q9BPZ3 127 aaKnown RBP9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 SERPINA10Q9UK55 444 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 MAP3K11Q16584 847 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.79□□□□□ -0.845e-8■■□□□ 14.2
NCKAP1-202ENST00000361354 IQCGQ9H095 443 aaKnown RBP9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 RAI14Q9P0K7 980 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 RAB3GAP2Q9H2M9 1393 aa9.79□□□□□ -0.84
NCKAP1-202ENST00000361354 A0A1W2PRG0 241 aa9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 STMN4Q9H169 189 aaPredicted RBP9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 TPD52P55327 224 aaPredicted RBP9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 HLTFQ14527 1009 aaKnown RBP eCLIP9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 CYP46A1Q9Y6A2 500 aa9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 KIF4BQ2VIQ3 1234 aa9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 WASF1Q92558 559 aa9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 CCDC69A6NI79 296 aa9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 TACC1O75410 805 aa9.78□□□□□ -0.84
NCKAP1-202ENST00000361354 CTNNA2P26232 953 aa9.77□□□□□ -0.84
NCKAP1-202ENST00000361354 EHBP1Q8NDI1 1231 aa9.77□□□□□ -0.84
NCKAP1-202ENST00000361354 TRERF1Q96PN7 1200 aa9.77□□□□□ -0.84
NCKAP1-202ENST00000361354 CCDC144AA2RUR9 1427 aa9.77□□□□□ -0.84
NCKAP1-202ENST00000361354 HSF2BPO75031 334 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 CCDC174Q6PII3 467 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 MAP7D1Q3KQU3 841 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 CEP120Q8N960 986 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 NBPF1Q3BBV0 1214 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 DNAJC21Q5F1R6 531 aaKnown RBP9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 NEMFO60524 1076 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 KIF5BP33176 963 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 GNL3LQ9NVN8 582 aaKnown RBP9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 CWC25Q9NXE8 425 aaPredicted RBP9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 EVC2Q86UK5 1308 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 STIM2Q9P246 746 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 PPP4R3BQ5MIZ7 849 aa9.77□□□□□ -0.85
NCKAP1-202ENST00000361354 SARNPP82979 210 aaKnown RBP9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 CKAP4Q07065 602 aaKnown RBP9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 APBB1IPQ7Z5R6 666 aaPredicted RBP9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 GGT6Q6P531 493 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 TSG101Q99816 390 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 RNF168Q8IYW5 571 aaPredicted RBP9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 K7ELQ4 463 aaPredicted RBP9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 TTC14Q96N46 770 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 NACAP1Q9BZK3 213 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 ERCC6Q03468 1493 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 DYNC1I1O14576 645 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 CIZ1Q9ULV3 898 aaPredicted RBP9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 VPS8Q8N3P4 1428 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 MIA2Q96PC5 1412 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 GSDMDP57764 484 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 GNAI1P63096 354 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 MAP4K4O95819 1239 aaPredicted RBP9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 EVA1CP58658 441 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 KIF4AO95239 1232 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 CEP135Q66GS9 1140 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 ACTN2P35609 894 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 TTC31Q49AM3 519 aaPredicted RBP9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 CACNA2D4Q7Z3S7 1137 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 KRT222Q8N1A0 295 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 LRRC45Q96CN5 670 aa9.76□□□□□ -0.85
NCKAP1-202ENST00000361354 TOP1P11387 765 aaKnown RBP9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 TCHPQ9BT92 498 aa9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 PPP4R3AQ6IN85 833 aa9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 GBP6Q6ZN66 633 aa9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 KDM4AO75164 1064 aa9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 STMN1P16949 149 aa9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 PSMC4P43686 418 aa9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 ZFP91Q96JP5 570 aaPredicted RBP9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 MPHOSPH10O00566 681 aaKnown RBP9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 NUP88Q99567 741 aaPredicted RBP9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 A0A1B0GUA9 196 aa9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 HMGB1P09429 215 aaKnown RBP9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 CCDC155Q8N6L0 562 aa9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 GBP7Q8N8V2 638 aaPredicted RBP9.75□□□□□ -0.85
NCKAP1-202ENST00000361354 TTC36A6NLP5 189 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 CCDC110Q8TBZ0 833 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 FOXD1Q16676 465 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 SLU7O95391 586 aaKnown RBP9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 CCDC121Q6ZUS5 278 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 RIC3Q7Z5B4 369 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 USP47Q96K76 1375 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 UBE2Q2Q8WVN8 375 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 PLVAPQ9BX97 442 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 SSBP05455 408 aaKnown RBP eCLIP9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 CCDC18Q5T9S5 1454 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 VCX3BQ9H321 246 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 MRPS9P82933 396 aaKnown RBP9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 SYTL4Q96C24 671 aaPredicted RBP9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 KIF5AQ12840 1032 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
NCKAP1-202ENST00000361354 MPHOSPH9Q99550 1183 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms