RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ZNF526Q8TF50 670 aaPredicted RBP8.58□□□□□ -1.04
RAB5B-201ENST00000360299 IQGAP3Q86VI3 1631 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 NPATQ14207 1427 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 DIP2BQ9P265 1576 aa8.58□□□□□ -1.04
RAB5B-201ENST00000360299 JCADQ9P266 1359 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 ST5P78524 1137 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 PLEKHG1Q9ULL1 1385 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 GNAT3A8MTJ3 354 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 NFE2L2Q16236 605 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 SPRYD3Q8NCJ5 442 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 GCC1Q96CN9 775 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 ATP6V1DQ9Y5K8 247 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
RAB5B-201ENST00000360299 INTS3Q68E01 1043 aaKnown RBP8.57□□□□□ -1.04
RAB5B-201ENST00000360299 AMOTL1Q8IY63 956 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 CCDC85AQ96PX6 553 aaPredicted RBP8.57□□□□□ -1.04
RAB5B-201ENST00000360299 ATF5Q9Y2D1 282 aaPredicted RBP8.57□□□□□ -1.04
RAB5B-201ENST00000360299 TRPM2O94759 1503 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 PRAG1Q86YV5 1406 aa8.57□□□□□ -1.04
RAB5B-201ENST00000360299 YTHDC2Q9H6S0 1430 aaKnown RBP8.57□□□□□ -1.04
RAB5B-201ENST00000360299 CCT4P50991 539 aaKnown RBP8.56□□□□□ -1.04
RAB5B-201ENST00000360299 PANK1Q8TE04 598 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 GLIPR1L2Q4G1C9 344 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 HDGFL1Q5TGJ6 251 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 RIMS1Q86UR5 1692 aaKnown RBP8.56□□□□□ -1.04
RAB5B-201ENST00000360299 ABCC1P33527 1531 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 CCDC27Q2M243 656 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 RNF20Q5VTR2 975 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 CNNM1Q9NRU3 951 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 A2ML1A8K2U0 1454 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 TMPOP42166 694 aaKnown RBP8.56□□□□□ -1.04
RAB5B-201ENST00000360299 SLFN5Q08AF3 891 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 E9PCH4 1651 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 DDX11L8A8MPP1 907 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 PLCB2Q00722 1185 aa8.56□□□□□ -1.04
RAB5B-201ENST00000360299 FYB1O15117 783 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 NBPF5PQ86XG9 351 aaPredicted RBP8.55□□□□□ -1.04
RAB5B-201ENST00000360299 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 MPHOSPH8Q99549 860 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 ARAP3Q8WWN8 1544 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 DNTTIP2Q5QJE6 756 aaKnown RBP8.55□□□□□ -1.04
RAB5B-201ENST00000360299 ATF7IPQ6VMQ6 1270 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 A0A087WZG4 1122 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 GPTP24298 496 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 TPRNQ4KMQ1 711 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 TRAPPC3LQ5T215 181 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 CPLX2Q6PUV4 134 aaKnown RBP8.55□□□□□ -1.04
RAB5B-201ENST00000360299 ANKIB1Q9P2G1 1089 aa8.55□□□□□ -1.04
RAB5B-201ENST00000360299 MIS18AQ9NYP9 233 aa8.54□□□□□ -1.04
RAB5B-201ENST00000360299 EIF2AK4Q9P2K8 1649 aaKnown RBP8.54□□□□□ -1.04
RAB5B-201ENST00000360299 ERVK-7P63135 1459 aa8.54□□□□□ -1.04
RAB5B-201ENST00000360299 WDHD1O75717 1129 aaPredicted RBP8.54□□□□□ -1.04
RAB5B-201ENST00000360299 PRIM1P49642 420 aaKnown RBP8.54□□□□□ -1.04
RAB5B-201ENST00000360299 ERC1Q8IUD2 1116 aa8.54□□□□□ -1.04
RAB5B-201ENST00000360299 SKOR2Q2VWA4 1001 aaPredicted RBP8.54□□□□□ -1.04
RAB5B-201ENST00000360299 CLASRPQ8N2M8 674 aaKnown RBP8.54□□□□□ -1.04
RAB5B-201ENST00000360299 NEUROD6Q96NK8 337 aa8.54□□□□□ -1.04
RAB5B-201ENST00000360299 ANKRD36BQ8N2N9 1353 aa8.54□□□□□ -1.04
RAB5B-201ENST00000360299 C6orf229H3BNL8 230 aa8.54□□□□□ -1.04
RAB5B-201ENST00000360299 HSP90AB2PQ58FF8 381 aa8.54□□□□□ -1.04
RAB5B-201ENST00000360299 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
RAB5B-201ENST00000360299 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
RAB5B-201ENST00000360299 CLSTN1O94985 981 aa8.53□□□□□ -1.04
RAB5B-201ENST00000360299 GNAI2P04899 355 aa8.53□□□□□ -1.04
RAB5B-201ENST00000360299 FMNL2Q96PY5 1086 aa8.53□□□□□ -1.04
RAB5B-201ENST00000360299 SETDB2Q96T68 719 aa8.53□□□□□ -1.04
RAB5B-201ENST00000360299 LNPKQ9C0E8 428 aa8.53□□□□□ -1.04
RAB5B-201ENST00000360299 CDC45O75419 566 aa8.53□□□□□ -1.04
RAB5B-201ENST00000360299 ALDH1L2Q3SY69 923 aa8.53□□□□□ -1.04
RAB5B-201ENST00000360299 MCM10Q7L590 875 aa8.53□□□□□ -1.04
RAB5B-201ENST00000360299 SLC4A2P04920 1241 aa8.52□□□□□ -1.04
RAB5B-201ENST00000360299 MVPQ14764 893 aaKnown RBP8.52□□□□□ -1.04
RAB5B-201ENST00000360299 VPS53Q5VIR6 699 aa8.52□□□□□ -1.04
RAB5B-201ENST00000360299 IFT57Q9NWB7 429 aa8.52□□□□□ -1.04
RAB5B-201ENST00000360299 NOB1Q9ULX3 412 aaKnown RBP8.52□□□□□ -1.04
RAB5B-201ENST00000360299 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
RAB5B-201ENST00000360299 METP08581 1390 aa8.52□□□□□ -1.05
RAB5B-201ENST00000360299 SPATA31A6Q5VVP1 1343 aa8.52□□□□□ -1.05
RAB5B-201ENST00000360299 HIP1O00291 1037 aa8.52□□□□□ -1.05
RAB5B-201ENST00000360299 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
RAB5B-201ENST00000360299 SYNE3Q6ZMZ3 975 aa8.52□□□□□ -1.05
RAB5B-201ENST00000360299 TEX13AQ9BXU3 409 aaPredicted RBP8.52□□□□□ -1.05
RAB5B-201ENST00000360299 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
RAB5B-201ENST00000360299 TRMT112Q9UI30 125 aaKnown RBP8.52□□□□□ -1.05
RAB5B-201ENST00000360299 PCDH11XQ9BZA7 1347 aa8.52□□□□□ -1.05
RAB5B-201ENST00000360299 PCDH11YQ9BZA8 1340 aa8.52□□□□□ -1.05
RAB5B-201ENST00000360299 TPM4P67936 248 aa8.51□□□□□ -1.05
RAB5B-201ENST00000360299 TSR2Q969E8 191 aaKnown RBP8.51□□□□□ -1.05
RAB5B-201ENST00000360299 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
RAB5B-201ENST00000360299 CAMSAP1Q5T5Y3 1602 aa8.51□□□□□ -1.05
RAB5B-201ENST00000360299 ARHGAP27Q6ZUM4 889 aa8.51□□□□□ -1.05
RAB5B-201ENST00000360299 ZSCAN29Q8IWY8 852 aaPredicted RBP8.51□□□□□ -1.05
RAB5B-201ENST00000360299 JDP2Q8WYK2 163 aa8.51□□□□□ -1.05
RAB5B-201ENST00000360299 PRDM15P57071 1507 aaPredicted RBP8.51□□□□□ -1.05
RAB5B-201ENST00000360299 MSNP26038 577 aaKnown RBP8.51□□□□□ -1.05
RAB5B-201ENST00000360299 IGHMBP2P38935 993 aaKnown RBP8.51□□□□□ -1.05
RAB5B-201ENST00000360299 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
RAB5B-201ENST00000360299 RPAP2Q8IXW5 612 aaPredicted RBP8.51□□□□□ -1.05
RAB5B-201ENST00000360299 SRCIN1Q9C0H9 1055 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms