RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 USHBP1Q8N6Y0 703 aa25.9■■□□□ 1.74
CBWD3-201ENST00000360171 THUMPD2Q9BTF0 503 aaKnown RBP25.9■■□□□ 1.74
CBWD3-201ENST00000360171 MYH16Q9H6N6 1097 aa25.9■■□□□ 1.74
CBWD3-201ENST00000360171 NBPF6Q5VWK0 638 aa25.89■■□□□ 1.74
CBWD3-201ENST00000360171 TSR2Q969E8 191 aaKnown RBP25.89■■□□□ 1.74
CBWD3-201ENST00000360171 NBPF4Q96M43 638 aa25.89■■□□□ 1.74
CBWD3-201ENST00000360171 RGS3P49796 1198 aa25.89■■□□□ 1.73
CBWD3-201ENST00000360171 CLUAP1Q96AJ1 413 aa25.89■■□□□ 1.73
CBWD3-201ENST00000360171 FAM83GA6ND36 823 aa25.88■■□□□ 1.73
CBWD3-201ENST00000360171 NFKBIBQ15653 356 aa25.88■■□□□ 1.73
CBWD3-201ENST00000360171 LRRC59Q96AG4 307 aaKnown RBP25.88■■□□□ 1.73
CBWD3-201ENST00000360171 ANKRD24Q8TF21 1146 aa25.86■■□□□ 1.73
CBWD3-201ENST00000360171 LMO7Q8WWI1 1683 aa25.86■■□□□ 1.73
CBWD3-201ENST00000360171 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
CBWD3-201ENST00000360171 MTHFSDQ2M296 383 aaKnown RBP25.86■■□□□ 1.73
CBWD3-201ENST00000360171 ABCC6O95255 1503 aa25.85■■□□□ 1.73
CBWD3-201ENST00000360171 IGHDP01880 384 aa25.85■■□□□ 1.73
CBWD3-201ENST00000360171 LMOD3Q0VAK6 560 aa25.85■■□□□ 1.73
CBWD3-201ENST00000360171 DCTN1Q14203 1278 aa25.85■■□□□ 1.73
CBWD3-201ENST00000360171 AHDC1Q5TGY3 1603 aaPredicted RBP25.84■■□□□ 1.73
CBWD3-201ENST00000360171 KIAA0232Q92628 1395 aa25.84■■□□□ 1.73
CBWD3-201ENST00000360171 CPDO75976 1380 aa25.84■■□□□ 1.73
CBWD3-201ENST00000360171 ERBB3P21860 1342 aa25.82■■□□□ 1.72
CBWD3-201ENST00000360171 CHRNA2Q15822 529 aa25.82■■□□□ 1.72
CBWD3-201ENST00000360171 FAM208AQ9UK61 1670 aaKnown RBP25.81■■□□□ 1.72
CBWD3-201ENST00000360171 CANXP27824 592 aaKnown RBP25.8■■□□□ 1.72
CBWD3-201ENST00000360171 RARSP54136 660 aaKnown RBP25.8■■□□□ 1.72
CBWD3-201ENST00000360171 GSE1Q14687 1217 aa25.8■■□□□ 1.72
CBWD3-201ENST00000360171 EXOSC9Q06265 439 aaKnown RBP25.8■■□□□ 1.72
CBWD3-201ENST00000360171 SLC4A3P48751 1232 aa25.79■■□□□ 1.72
CBWD3-201ENST00000360171 CALD1Q05682 793 aaKnown RBP25.79■■□□□ 1.72
CBWD3-201ENST00000360171 LRRC37A3O60309 1634 aa25.79■■□□□ 1.72
CBWD3-201ENST00000360171 ZNF853P0CG23 659 aa25.79■■□□□ 1.72
CBWD3-201ENST00000360171 MCM10Q7L590 875 aa25.79■■□□□ 1.72
CBWD3-201ENST00000360171 GAS2L2Q8NHY3 880 aa25.79■■□□□ 1.72
CBWD3-201ENST00000360171 IFT57Q9NWB7 429 aa25.78■■□□□ 1.72
CBWD3-201ENST00000360171 COG6Q9Y2V7 657 aa25.78■■□□□ 1.72
CBWD3-201ENST00000360171 PANK1Q8TE04 598 aa25.78■■□□□ 1.72
CBWD3-201ENST00000360171 GNAI1P63096 354 aa25.75■■□□□ 1.71
CBWD3-201ENST00000360171 CRB1P82279 1406 aa25.75■■□□□ 1.71
CBWD3-201ENST00000360171 CFAP44Q96MT7 982 aa25.75■■□□□ 1.71
CBWD3-201ENST00000360171 MBIPQ9NS73 344 aa25.75■■□□□ 1.71
CBWD3-201ENST00000360171 PHLPP1O60346 1717 aa25.75■■□□□ 1.71
CBWD3-201ENST00000360171 COL22A1Q8NFW1 1626 aaPredicted RBP25.73■■□□□ 1.71
CBWD3-201ENST00000360171 MAP3K5Q99683 1374 aa25.72■■□□□ 1.71
CBWD3-201ENST00000360171 COL16A1Q07092 1604 aaPredicted RBP25.72■■□□□ 1.71
CBWD3-201ENST00000360171 CT47B1P0C2W7 299 aaPredicted RBP25.72■■□□□ 1.71
CBWD3-201ENST00000360171 PRDM11Q9NQV5 511 aa25.72■■□□□ 1.71
CBWD3-201ENST00000360171 HAP1P54257 671 aaPredicted RBP25.71■■□□□ 1.71
CBWD3-201ENST00000360171 BCL2L13Q9BXK5 485 aa25.71■■□□□ 1.71
CBWD3-201ENST00000360171 GNAT3A8MTJ3 354 aa25.7■■□□□ 1.7
CBWD3-201ENST00000360171 RTF1Q92541 710 aaKnown RBP25.7■■□□□ 1.7
CBWD3-201ENST00000360171 FRAT1Q92837 279 aaPredicted RBP25.69■■□□□ 1.7
CBWD3-201ENST00000360171 NLRP2Q9NX02 1062 aa25.69■■□□□ 1.7
CBWD3-201ENST00000360171 HTATSF1O43719 755 aaKnown RBP25.68■■□□□ 1.7
CBWD3-201ENST00000360171 AEBP2Q6ZN18 517 aaPredicted RBP25.68■■□□□ 1.7
CBWD3-201ENST00000360171 COL5A2P05997 1499 aaPredicted RBP25.68■■□□□ 1.7
CBWD3-201ENST00000360171 CSB-PGBD3P0DP91 1061 aa25.67■■□□□ 1.7
CBWD3-201ENST00000360171 BECN1Q14457 450 aa25.67■■□□□ 1.7
CBWD3-201ENST00000360171 CHL1O00533 1208 aa25.66■■□□□ 1.7
CBWD3-201ENST00000360171 TSPYL6Q8N831 410 aa25.66■■□□□ 1.7
CBWD3-201ENST00000360171 RLBP1P12271 317 aa25.65■■□□□ 1.7
CBWD3-201ENST00000360171 IL27Q8NEV9 243 aa25.65■■□□□ 1.7
CBWD3-201ENST00000360171 IL17REQ8NFR9 667 aa25.65■■□□□ 1.7
CBWD3-201ENST00000360171 PCDHB15Q9Y5E8 787 aa25.65■■□□□ 1.7
CBWD3-201ENST00000360171 MEGF6O75095 1541 aa25.65■■□□□ 1.7
CBWD3-201ENST00000360171 RWDD1Q9H446 243 aaPredicted RBP25.65■■□□□ 1.7
CBWD3-201ENST00000360171 TOM1O60784 492 aa25.64■■□□□ 1.7
CBWD3-201ENST00000360171 PLEKHO1Q53GL0 409 aaPredicted RBP25.64■■□□□ 1.7
CBWD3-201ENST00000360171 PIP4K2BP78356 416 aa25.63■■□□□ 1.69
CBWD3-201ENST00000360171 SSH1Q8WYL5 1049 aa25.63■■□□□ 1.69
CBWD3-201ENST00000360171 ZNF530Q6P9A1 599 aaPredicted RBP25.63■■□□□ 1.69
CBWD3-201ENST00000360171 C8orf58Q8NAV2 365 aa25.63■■□□□ 1.69
CBWD3-201ENST00000360171 PKD1L3Q7Z443 1732 aa25.62■■□□□ 1.69
CBWD3-201ENST00000360171 AMOTQ4VCS5 1084 aa25.62■■□□□ 1.69
CBWD3-201ENST00000360171 VAMP4O75379 141 aa25.62■■□□□ 1.69
CBWD3-201ENST00000360171 MIS18AQ9NYP9 233 aa25.62■■□□□ 1.69
CBWD3-201ENST00000360171 WDR17Q8IZU2 1322 aa25.62■■□□□ 1.69
CBWD3-201ENST00000360171 FRAT2O75474 233 aaPredicted RBP25.61■■□□□ 1.69
CBWD3-201ENST00000360171 SEC24BO95487 1268 aa25.61■■□□□ 1.69
CBWD3-201ENST00000360171 SMC4Q9NTJ3 1288 aa25.61■■□□□ 1.69
CBWD3-201ENST00000360171 CEMIPQ8WUJ3 1361 aa25.61■■□□□ 1.69
CBWD3-201ENST00000360171 COL14A1Q05707 1796 aaKnown RBP25.61■■□□□ 1.69
CBWD3-201ENST00000360171 MVPQ14764 893 aaKnown RBP25.61■■□□□ 1.69
CBWD3-201ENST00000360171 ELL2O00472 640 aaPredicted RBP25.6■■□□□ 1.69
CBWD3-201ENST00000360171 AKAP4Q5JQC9 854 aa25.6■■□□□ 1.69
CBWD3-201ENST00000360171 UPF2Q9HAU5 1272 aaKnown RBP25.6■■□□□ 1.69
CBWD3-201ENST00000360171 ADAMTS7Q9UKP4 1686 aa25.6■■□□□ 1.69
CBWD3-201ENST00000360171 KRT24Q2M2I5 525 aa25.59■■□□□ 1.69
CBWD3-201ENST00000360171 PDZRN3Q9UPQ7 1066 aa25.59■■□□□ 1.69
CBWD3-201ENST00000360171 TNNQ9UQP3 1299 aa25.59■■□□□ 1.69
CBWD3-201ENST00000360171 PARP4Q9UKK3 1724 aaKnown RBP25.59■■□□□ 1.69
CBWD3-201ENST00000360171 TWISTNBQ3B726 338 aaPredicted RBP25.59■■□□□ 1.69
CBWD3-201ENST00000360171 ZKSCAN2Q63HK3 967 aa25.59■■□□□ 1.69
CBWD3-201ENST00000360171 RAPGEF4Q8WZA2 1011 aa25.59■■□□□ 1.69
CBWD3-201ENST00000360171 LGR6Q9HBX8 967 aa25.58■■□□□ 1.69
CBWD3-201ENST00000360171 UBAP1LF5GYI3 381 aa25.58■■□□□ 1.68
CBWD3-201ENST00000360171 TBC1D32Q96NH3 1257 aa25.58■■□□□ 1.68
CBWD3-201ENST00000360171 TSPYL4Q9UJ04 414 aa25.58■■□□□ 1.68
CBWD3-201ENST00000360171 KDM3BQ7LBC6 1761 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms