RNA–Protein interactions for RNA: ENST00000360115.8

MACF1-202, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-202ENST00000360115 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
MACF1-202ENST00000360115 PKP1Q13835 747 aa16.43■□□□□ 0.22
MACF1-202ENST00000360115 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
MACF1-202ENST00000360115 GPT2Q8TD30 523 aa16.42■□□□□ 0.22
MACF1-202ENST00000360115 RGS12O14924 1447 aa16.42■□□□□ 0.22
MACF1-202ENST00000360115 SDSP20132 328 aa16.41■□□□□ 0.22
MACF1-202ENST00000360115 MCM5P33992 734 aa16.41■□□□□ 0.22
MACF1-202ENST00000360115 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
MACF1-202ENST00000360115 AATKQ6ZMQ8 1374 aa16.41■□□□□ 0.22
MACF1-202ENST00000360115 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
MACF1-202ENST00000360115 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
MACF1-202ENST00000360115 REC8O95072 547 aa16.41■□□□□ 0.22
MACF1-202ENST00000360115 C16orf71Q8IYS4 520 aaPredicted RBP16.41■□□□□ 0.22
MACF1-202ENST00000360115 LRSAM1Q6UWE0 723 aa16.4■□□□□ 0.22
MACF1-202ENST00000360115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.4■□□□□ 0.22
MACF1-202ENST00000360115 EDC4Q6P2E9 1401 aaKnown RBP16.4■□□□□ 0.22
MACF1-202ENST00000360115 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
MACF1-202ENST00000360115 CEP85Q6P2H3 762 aa16.4■□□□□ 0.22
MACF1-202ENST00000360115 ZGPATQ8N5A5 531 aaKnown RBP16.4■□□□□ 0.22
MACF1-202ENST00000360115 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
MACF1-202ENST00000360115 ZKSCAN5Q9Y2L8 839 aa16.4■□□□□ 0.22
MACF1-202ENST00000360115 NEO1Q92859 1461 aa16.39■□□□□ 0.21
MACF1-202ENST00000360115 FBLN1P23142 703 aa16.39■□□□□ 0.21
MACF1-202ENST00000360115 HAP1P54257 671 aaPredicted RBP16.39■□□□□ 0.21
MACF1-202ENST00000360115 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.21
MACF1-202ENST00000360115 EMILIN1Q9Y6C2 1016 aa16.39■□□□□ 0.21
MACF1-202ENST00000360115 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
MACF1-202ENST00000360115 CSPP1Q1MSJ5 1256 aa16.38■□□□□ 0.21
MACF1-202ENST00000360115 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
MACF1-202ENST00000360115 ERC2O15083 957 aa16.37■□□□□ 0.21
MACF1-202ENST00000360115 MBD3O95983 291 aa16.37■□□□□ 0.21
MACF1-202ENST00000360115 TMEM63CQ9P1W3 806 aa16.37■□□□□ 0.21
MACF1-202ENST00000360115 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
MACF1-202ENST00000360115 MSH6P52701 1360 aa16.36■□□□□ 0.21
MACF1-202ENST00000360115 CCDC39Q9UFE4 941 aa16.36■□□□□ 0.21
MACF1-202ENST00000360115 PTPRCP08575 1304 aa16.36■□□□□ 0.21
MACF1-202ENST00000360115 NRKQ7Z2Y5 1582 aa16.35■□□□□ 0.21
MACF1-202ENST00000360115 OSBPL3Q9H4L5 887 aa16.35■□□□□ 0.21
MACF1-202ENST00000360115 MCM2P49736 904 aa16.35■□□□□ 0.21
MACF1-202ENST00000360115 KIAA0232Q92628 1395 aa16.35■□□□□ 0.21
MACF1-202ENST00000360115 FAM83GA6ND36 823 aa16.34■□□□□ 0.21
MACF1-202ENST00000360115 XPCQ01831 940 aaPredicted RBP16.34■□□□□ 0.21
MACF1-202ENST00000360115 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
MACF1-202ENST00000360115 SYCE3A1L190 88 aa16.33■□□□□ 0.21
MACF1-202ENST00000360115 SMARCA5O60264 1052 aaPredicted RBP16.33■□□□□ 0.21
MACF1-202ENST00000360115 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.2
MACF1-202ENST00000360115 RICTORQ6R327 1708 aa16.33■□□□□ 0.2
MACF1-202ENST00000360115 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.2
MACF1-202ENST00000360115 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
MACF1-202ENST00000360115 BRD1O95696 1058 aa16.32■□□□□ 0.2
MACF1-202ENST00000360115 UQCRHLA0A096LP55 91 aa16.32■□□□□ 0.2
MACF1-202ENST00000360115 UQCRHP07919 91 aa16.32■□□□□ 0.2
MACF1-202ENST00000360115 CUL4AQ13619 759 aa16.32■□□□□ 0.2
MACF1-202ENST00000360115 HMMRO75330 724 aa16.32■□□□□ 0.2
MACF1-202ENST00000360115 NME9Q86XW9 330 aa16.32■□□□□ 0.2
MACF1-202ENST00000360115 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
MACF1-202ENST00000360115 NSFL1CQ9UNZ2 370 aaKnown RBP16.32■□□□□ 0.2
MACF1-202ENST00000360115 TUBGCP6Q96RT7 1819 aa16.31■□□□□ 0.2
MACF1-202ENST00000360115 DYNC1I1O14576 645 aa16.31■□□□□ 0.2
MACF1-202ENST00000360115 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
MACF1-202ENST00000360115 MTERF4Q7Z6M4 381 aaKnown RBP16.31■□□□□ 0.2
MACF1-202ENST00000360115 MEIS3Q99687 375 aa16.31■□□□□ 0.2
MACF1-202ENST00000360115 CHL1O00533 1208 aa16.31■□□□□ 0.2
MACF1-202ENST00000360115 RAPGEF3O95398 923 aa16.31■□□□□ 0.2
MACF1-202ENST00000360115 RBM10P98175 930 aaKnown RBP16.31■□□□□ 0.2
MACF1-202ENST00000360115 PDE1AP54750 535 aa16.3■□□□□ 0.2
MACF1-202ENST00000360115 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
MACF1-202ENST00000360115 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
MACF1-202ENST00000360115 C3P01024 1663 aa16.29■□□□□ 0.2
MACF1-202ENST00000360115 PODXL2Q9NZ53 605 aa16.29■□□□□ 0.2
MACF1-202ENST00000360115 CPS1P31327 1500 aa16.29■□□□□ 0.2
MACF1-202ENST00000360115 NEK4P51957 841 aa16.29■□□□□ 0.2
MACF1-202ENST00000360115 SYAP1Q96A49 352 aaPredicted RBP16.29■□□□□ 0.2
MACF1-202ENST00000360115 IL17RAQ96F46 866 aa16.29■□□□□ 0.2
MACF1-202ENST00000360115 COG3Q96JB2 828 aa16.29■□□□□ 0.2
MACF1-202ENST00000360115 ANAPC15P60006 121 aa16.28■□□□□ 0.2
MACF1-202ENST00000360115 TSPY26PQ9H489 355 aa16.28■□□□□ 0.2
MACF1-202ENST00000360115 FAM13BQ9NYF5 915 aa16.28■□□□□ 0.2
MACF1-202ENST00000360115 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
MACF1-202ENST00000360115 APBB1O00213 710 aa16.28■□□□□ 0.2
MACF1-202ENST00000360115 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
MACF1-202ENST00000360115 CHAMP1Q96JM3 812 aa16.28■□□□□ 0.2
MACF1-202ENST00000360115 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
MACF1-202ENST00000360115 ZRANB1Q9UGI0 708 aa16.27■□□□□ 0.2
MACF1-202ENST00000360115 SALL3Q9BXA9 1300 aa16.27■□□□□ 0.2
MACF1-202ENST00000360115 MCCP23508 829 aa16.27■□□□□ 0.2
MACF1-202ENST00000360115 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
MACF1-202ENST00000360115 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
MACF1-202ENST00000360115 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
MACF1-202ENST00000360115 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
MACF1-202ENST00000360115 PHF14O94880 888 aa16.26■□□□□ 0.19
MACF1-202ENST00000360115 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
MACF1-202ENST00000360115 RNF214Q8ND24 703 aa16.25■□□□□ 0.19
MACF1-202ENST00000360115 CCT4P50991 539 aaKnown RBP16.24■□□□□ 0.19
MACF1-202ENST00000360115 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
MACF1-202ENST00000360115 FOXD4L5Q5VV16 416 aaPredicted RBP16.24■□□□□ 0.19
MACF1-202ENST00000360115 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
MACF1-202ENST00000360115 FOXD4L4Q8WXT5 416 aaPredicted RBP16.24■□□□□ 0.19
MACF1-202ENST00000360115 CRB1P82279 1406 aa16.24■□□□□ 0.19
MACF1-202ENST00000360115 UVSSAQ2YD98 709 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms