RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 ESCO1Q5FWF5 840 aa25.65■■□□□ 1.7
BRD4-202ENST00000360016 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
BRD4-202ENST00000360016 CRB1P82279 1406 aa25.63■■□□□ 1.69
BRD4-202ENST00000360016 FOXO3O43524 673 aa25.63■■□□□ 1.69
BRD4-202ENST00000360016 PSME1Q06323 249 aa25.63■■□□□ 1.69
BRD4-202ENST00000360016 GAS2L2Q8NHY3 880 aa25.61■■□□□ 1.69
BRD4-202ENST00000360016 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
BRD4-202ENST00000360016 KIAA0232Q92628 1395 aa25.61■■□□□ 1.69
BRD4-202ENST00000360016 VIRMAQ69YN4 1812 aaKnown RBP25.6■■□□□ 1.69
BRD4-202ENST00000360016 NWD1Q149M9 1564 aa25.6■■□□□ 1.69
BRD4-202ENST00000360016 HAP1P54257 671 aaPredicted RBP25.6■■□□□ 1.69
BRD4-202ENST00000360016 ABCC4O15439 1325 aa25.6■■□□□ 1.69
BRD4-202ENST00000360016 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
BRD4-202ENST00000360016 CHMP4BQ9H444 224 aaKnown RBP25.59■■□□□ 1.69
BRD4-202ENST00000360016 ZBTB7BO15156 539 aaPredicted RBP25.59■■□□□ 1.69
BRD4-202ENST00000360016 KRT24Q2M2I5 525 aa25.58■■□□□ 1.69
BRD4-202ENST00000360016 API5Q9BZZ5 524 aaKnown RBP25.58■■□□□ 1.69
BRD4-202ENST00000360016 LTN1O94822 1766 aa25.57■■□□□ 1.68
BRD4-202ENST00000360016 LTV1Q96GA3 475 aaPredicted RBP25.57■■□□□ 1.68
BRD4-202ENST00000360016 DDRGK1Q96HY6 314 aa25.57■■□□□ 1.68
BRD4-202ENST00000360016 SMC5Q8IY18 1101 aa25.56■■□□□ 1.68
BRD4-202ENST00000360016 NFAT5O94916 1531 aa25.56■■□□□ 1.68
BRD4-202ENST00000360016 ORAI2Q96SN7 254 aa25.55■■□□□ 1.68
BRD4-202ENST00000360016 HTATSF1O43719 755 aaKnown RBP25.55■■□□□ 1.68
BRD4-202ENST00000360016 IP6K1Q92551 441 aa25.54■■□□□ 1.68
BRD4-202ENST00000360016 PROSER2Q86WR7 435 aaPredicted RBP25.54■■□□□ 1.68
BRD4-202ENST00000360016 MIS18AQ9NYP9 233 aa25.54■■□□□ 1.68
BRD4-202ENST00000360016 KCNH5Q8NCM2 988 aa25.53■■□□□ 1.68
BRD4-202ENST00000360016 TSPYL4Q9UJ04 414 aa25.52■■□□□ 1.68
BRD4-202ENST00000360016 SPRYD3Q8NCJ5 442 aa25.52■■□□□ 1.68
BRD4-202ENST00000360016 GNAT3A8MTJ3 354 aa25.51■■□□□ 1.67
BRD4-202ENST00000360016 LRRC37A3O60309 1634 aa25.49■■□□□ 1.67
BRD4-202ENST00000360016 XPCQ01831 940 aaPredicted RBP25.48■■□□□ 1.67
BRD4-202ENST00000360016 USHBP1Q8N6Y0 703 aa25.48■■□□□ 1.67
BRD4-202ENST00000360016 C1orf115Q9H7X2 142 aa25.47■■□□□ 1.67
BRD4-202ENST00000360016 SEC24BO95487 1268 aa25.47■■□□□ 1.67
BRD4-202ENST00000360016 MAP3K5Q99683 1374 aa25.47■■□□□ 1.67
BRD4-202ENST00000360016 PHRF1Q9P1Y6 1649 aaKnown RBP25.46■■□□□ 1.67
BRD4-202ENST00000360016 INTS3Q68E01 1043 aaKnown RBP25.46■■□□□ 1.67
BRD4-202ENST00000360016 C19orf44Q9H6X5 657 aa25.46■■□□□ 1.67
BRD4-202ENST00000360016 RGS12O14924 1447 aa25.46■■□□□ 1.67
BRD4-202ENST00000360016 NUCB1Q02818 461 aa25.46■■□□□ 1.67
BRD4-202ENST00000360016 PTPRCP08575 1304 aa25.45■■□□□ 1.67
BRD4-202ENST00000360016 MSH6P52701 1360 aa25.45■■□□□ 1.67
BRD4-202ENST00000360016 ZBTB7CA1YPR0 619 aa25.45■■□□□ 1.66
BRD4-202ENST00000360016 USP19O94966 1318 aa25.45■■□□□ 1.66
BRD4-202ENST00000360016 NBPF6Q5VWK0 638 aa25.44■■□□□ 1.66
BRD4-202ENST00000360016 NBPF4Q96M43 638 aa25.44■■□□□ 1.66
BRD4-202ENST00000360016 C1orf167Q5SNV9 1468 aa25.44■■□□□ 1.66
BRD4-202ENST00000360016 GCP02774 474 aa25.44■■□□□ 1.66
BRD4-202ENST00000360016 IL17REQ8NFR9 667 aa25.44■■□□□ 1.66
BRD4-202ENST00000360016 SLC4A2P04920 1241 aa25.43■■□□□ 1.66
BRD4-202ENST00000360016 SLIT3O75094 1523 aa25.43■■□□□ 1.66
BRD4-202ENST00000360016 GCC1Q96CN9 775 aa25.42■■□□□ 1.66
BRD4-202ENST00000360016 KRT28Q7Z3Y7 464 aa25.42■■□□□ 1.66
BRD4-202ENST00000360016 TRPM3Q9HCF6 1732 aaPredicted RBP25.42■■□□□ 1.66
BRD4-202ENST00000360016 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
BRD4-202ENST00000360016 SIRT2Q8IXJ6 389 aa25.42■■□□□ 1.66
BRD4-202ENST00000360016 LMOD2Q6P5Q4 547 aa25.41■■□□□ 1.66
BRD4-202ENST00000360016 ARHGEF25Q86VW2 580 aa25.41■■□□□ 1.66
BRD4-202ENST00000360016 SLKQ9H2G2 1235 aaPredicted RBP25.41■■□□□ 1.66
BRD4-202ENST00000360016 CHD1LQ86WJ1 897 aa25.41■■□□□ 1.66
BRD4-202ENST00000360016 BABAM1Q9NWV8 329 aa25.39■■□□□ 1.66
BRD4-202ENST00000360016 TAF7Q15545 349 aaPredicted RBP25.39■■□□□ 1.65
BRD4-202ENST00000360016 LNPKQ9C0E8 428 aa25.39■■□□□ 1.65
BRD4-202ENST00000360016 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
BRD4-202ENST00000360016 PLEKHG5O94827 1062 aa25.37■■□□□ 1.65
BRD4-202ENST00000360016 FRAT2O75474 233 aaPredicted RBP25.37■■□□□ 1.65
BRD4-202ENST00000360016 NFKBIBQ15653 356 aa25.37■■□□□ 1.65
BRD4-202ENST00000360016 LRRC59Q96AG4 307 aaKnown RBP25.37■■□□□ 1.65
BRD4-202ENST00000360016 ANKRD45Q5TZF3 282 aa25.36■■□□□ 1.65
BRD4-202ENST00000360016 G2E3Q7L622 706 aa25.36■■□□□ 1.65
BRD4-202ENST00000360016 TMEM94Q12767 1356 aa25.35■■□□□ 1.65
BRD4-202ENST00000360016 ATF3P18847 181 aa25.35■■□□□ 1.65
BRD4-202ENST00000360016 UPF2Q9HAU5 1272 aaKnown RBP25.35■■□□□ 1.65
BRD4-202ENST00000360016 STK31Q9BXU1 1019 aa25.35■■□□□ 1.65
BRD4-202ENST00000360016 SOS1Q07889 1333 aaPredicted RBP25.34■■□□□ 1.65
BRD4-202ENST00000360016 STRCP1A6NGW2 1772 aa25.34■■□□□ 1.65
BRD4-202ENST00000360016 CEMIPQ8WUJ3 1361 aa25.34■■□□□ 1.65
BRD4-202ENST00000360016 MST1RQ04912 1400 aa25.33■■□□□ 1.65
BRD4-202ENST00000360016 CCDC30Q5VVM6 783 aa25.33■■□□□ 1.65
BRD4-202ENST00000360016 ANKRD24Q8TF21 1146 aa25.31■■□□□ 1.64
BRD4-202ENST00000360016 NCOA3Q9Y6Q9 1424 aa25.31■■□□□ 1.64
BRD4-202ENST00000360016 ANKRD44Q8N8A2 993 aa25.31■■□□□ 1.64
BRD4-202ENST00000360016 DCCP43146 1447 aa25.31■■□□□ 1.64
BRD4-202ENST00000360016 NCAPD2Q15021 1401 aa25.31■■□□□ 1.64
BRD4-202ENST00000360016 FAM208AQ9UK61 1670 aaKnown RBP25.3■■□□□ 1.64
BRD4-202ENST00000360016 ALS2Q96Q42 1657 aa25.3■■□□□ 1.64
BRD4-202ENST00000360016 ATP10DQ9P241 1426 aa25.3■■□□□ 1.64
BRD4-202ENST00000360016 PLEKHO1Q53GL0 409 aaPredicted RBP25.3■■□□□ 1.64
BRD4-202ENST00000360016 TBC1D32Q96NH3 1257 aa25.3■■□□□ 1.64
BRD4-202ENST00000360016 RPAP2Q8IXW5 612 aaPredicted RBP25.29■■□□□ 1.64
BRD4-202ENST00000360016 LGR6Q9HBX8 967 aa25.29■■□□□ 1.64
BRD4-202ENST00000360016 MEIS3Q99687 375 aa25.29■■□□□ 1.64
BRD4-202ENST00000360016 MED1Q15648 1581 aaPredicted RBP25.29■■□□□ 1.64
BRD4-202ENST00000360016 F6X3S4 739 aa25.29■■□□□ 1.64
BRD4-202ENST00000360016 CCT4P50991 539 aaKnown RBP25.29■■□□□ 1.64
BRD4-202ENST00000360016 DCTPP1Q9H773 170 aa25.29■■□□□ 1.64
BRD4-202ENST00000360016 AXIN2Q9Y2T1 843 aa25.29■■□□□ 1.64
BRD4-202ENST00000360016 AKAP4Q5JQC9 854 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms