RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CSB-PGBD3P0DP91 1061 aa17.92■□□□□ 0.46
CSNK1E-201ENST00000359867 STRN4Q9NRL3 753 aa17.91■□□□□ 0.46
CSNK1E-201ENST00000359867 BTG4Q9NY30 223 aa17.91■□□□□ 0.46
CSNK1E-201ENST00000359867 ABCC6O95255 1503 aa17.91■□□□□ 0.46
CSNK1E-201ENST00000359867 COL5A2P05997 1499 aaPredicted RBP17.91■□□□□ 0.46
CSNK1E-201ENST00000359867 PLIN1O60240 522 aa17.9■□□□□ 0.46
CSNK1E-201ENST00000359867 PHACTR3Q96KR7 559 aa17.9■□□□□ 0.46
CSNK1E-201ENST00000359867 TMPOP42166 694 aaKnown RBP17.9■□□□□ 0.46
CSNK1E-201ENST00000359867 NLRP2Q9NX02 1062 aa17.9■□□□□ 0.46
CSNK1E-201ENST00000359867 LRP6O75581 1613 aa17.9■□□□□ 0.46
CSNK1E-201ENST00000359867 COL14A1Q05707 1796 aaKnown RBP17.89■□□□□ 0.45
CSNK1E-201ENST00000359867 MYH16Q9H6N6 1097 aa17.89■□□□□ 0.45
CSNK1E-201ENST00000359867 KDRP35968 1356 aa17.88■□□□□ 0.45
CSNK1E-201ENST00000359867 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
CSNK1E-201ENST00000359867 EVA1CP58658 441 aa17.87■□□□□ 0.45
CSNK1E-201ENST00000359867 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
CSNK1E-201ENST00000359867 C8orf37Q96NL8 207 aa17.87■□□□□ 0.45
CSNK1E-201ENST00000359867 PLCH1Q4KWH8 1693 aa17.87■□□□□ 0.45
CSNK1E-201ENST00000359867 SPATA31A6Q5VVP1 1343 aa17.87■□□□□ 0.45
CSNK1E-201ENST00000359867 NEFMP07197 916 aa17.86■□□□□ 0.45
CSNK1E-201ENST00000359867 IL16Q14005 1332 aa17.86■□□□□ 0.45
CSNK1E-201ENST00000359867 WDR17Q8IZU2 1322 aa17.86■□□□□ 0.45
CSNK1E-201ENST00000359867 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
CSNK1E-201ENST00000359867 CRBNQ96SW2 442 aa17.86■□□□□ 0.45
CSNK1E-201ENST00000359867 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
CSNK1E-201ENST00000359867 USP35Q9P2H5 1018 aa17.85■□□□□ 0.45
CSNK1E-201ENST00000359867 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
CSNK1E-201ENST00000359867 CT47B1P0C2W7 299 aaPredicted RBP17.84■□□□□ 0.45
CSNK1E-201ENST00000359867 FAM208AQ9UK61 1670 aaKnown RBP17.84■□□□□ 0.45
CSNK1E-201ENST00000359867 RIPK4P57078 832 aa17.83■□□□□ 0.44
CSNK1E-201ENST00000359867 NGLY1Q96IV0 654 aa17.83■□□□□ 0.44
CSNK1E-201ENST00000359867 IPO9Q96P70 1041 aaKnown RBP17.83■□□□□ 0.44
CSNK1E-201ENST00000359867 NCAPD2Q15021 1401 aa17.83■□□□□ 0.44
CSNK1E-201ENST00000359867 EIF5BO60841 1220 aaKnown RBP17.82■□□□□ 0.44
CSNK1E-201ENST00000359867 C20orf194Q5TEA3 1177 aa17.82■□□□□ 0.44
CSNK1E-201ENST00000359867 FBXO41Q8TF61 875 aa17.82■□□□□ 0.44
CSNK1E-201ENST00000359867 BCAR3O75815 825 aa17.81■□□□□ 0.44
CSNK1E-201ENST00000359867 MEX3CQ5U5Q3 659 aaKnown RBP17.81■□□□□ 0.44
CSNK1E-201ENST00000359867 SLIT2O94813 1529 aa17.81■□□□□ 0.44
CSNK1E-201ENST00000359867 NRAPQ86VF7 1730 aa17.81■□□□□ 0.44
CSNK1E-201ENST00000359867 PDE3AQ14432 1141 aa17.8■□□□□ 0.44
CSNK1E-201ENST00000359867 MTHFSDQ2M296 383 aaKnown RBP17.8■□□□□ 0.44
CSNK1E-201ENST00000359867 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
CSNK1E-201ENST00000359867 MEGF6O75095 1541 aa17.8■□□□□ 0.44
CSNK1E-201ENST00000359867 RARSP54136 660 aaKnown RBP17.8■□□□□ 0.44
CSNK1E-201ENST00000359867 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
CSNK1E-201ENST00000359867 CRB1P82279 1406 aa17.8■□□□□ 0.44
CSNK1E-201ENST00000359867 DLG5Q8TDM6 1919 aa17.79■□□□□ 0.44
CSNK1E-201ENST00000359867 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
CSNK1E-201ENST00000359867 CARD10Q9BWT7 1032 aa17.78■□□□□ 0.44
CSNK1E-201ENST00000359867 PKNOX2Q96KN3 472 aa17.78■□□□□ 0.44
CSNK1E-201ENST00000359867 NWD2Q9ULI1 1742 aa17.77■□□□□ 0.44
CSNK1E-201ENST00000359867 BCL9LQ86UU0 1499 aa17.77■□□□□ 0.43
CSNK1E-201ENST00000359867 CALD1Q05682 793 aaKnown RBP17.77■□□□□ 0.43
CSNK1E-201ENST00000359867 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
CSNK1E-201ENST00000359867 CCDC9Q9Y3X0 531 aaKnown RBP17.76■□□□□ 0.43
CSNK1E-201ENST00000359867 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
CSNK1E-201ENST00000359867 SKAP1Q86WV1 359 aa17.75■□□□□ 0.43
CSNK1E-201ENST00000359867 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
CSNK1E-201ENST00000359867 LMOD3Q0VAK6 560 aa17.75■□□□□ 0.43
CSNK1E-201ENST00000359867 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
CSNK1E-201ENST00000359867 FNBP4Q8N3X1 1017 aaPredicted RBP17.75■□□□□ 0.43
CSNK1E-201ENST00000359867 USP21Q9UK80 565 aa17.75■□□□□ 0.43
CSNK1E-201ENST00000359867 GAS2L2Q8NHY3 880 aa17.74■□□□□ 0.43
CSNK1E-201ENST00000359867 AFF2P51816 1311 aa17.74■□□□□ 0.43
CSNK1E-201ENST00000359867 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
CSNK1E-201ENST00000359867 ZNF530Q6P9A1 599 aaPredicted RBP17.73■□□□□ 0.43
CSNK1E-201ENST00000359867 MCM10Q7L590 875 aa17.73■□□□□ 0.43
CSNK1E-201ENST00000359867 IL2RBP14784 551 aa17.72■□□□□ 0.43
CSNK1E-201ENST00000359867 PLEKHO1Q53GL0 409 aaPredicted RBP17.72■□□□□ 0.43
CSNK1E-201ENST00000359867 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
CSNK1E-201ENST00000359867 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
CSNK1E-201ENST00000359867 AAMPQ13685 434 aa17.72■□□□□ 0.43
CSNK1E-201ENST00000359867 SPATA31A1Q5TZJ5 1347 aa17.72■□□□□ 0.43
CSNK1E-201ENST00000359867 RTL5Q5HYW3 569 aaPredicted RBP17.71■□□□□ 0.43
CSNK1E-201ENST00000359867 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
CSNK1E-201ENST00000359867 SPATA31A5Q5VU36 1347 aa17.71■□□□□ 0.43
CSNK1E-201ENST00000359867 SPATA31A7Q8IWB4 1347 aa17.71■□□□□ 0.43
CSNK1E-201ENST00000359867 PARP4Q9UKK3 1724 aaKnown RBP17.71■□□□□ 0.43
CSNK1E-201ENST00000359867 AMOTQ4VCS5 1084 aa17.7■□□□□ 0.42
CSNK1E-201ENST00000359867 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
CSNK1E-201ENST00000359867 MAP3K5Q99683 1374 aa17.7■□□□□ 0.42
CSNK1E-201ENST00000359867 CENPQQ7L2Z9 268 aaPredicted RBP17.69■□□□□ 0.42
CSNK1E-201ENST00000359867 KDM2BQ8NHM5 1336 aa17.69■□□□□ 0.42
CSNK1E-201ENST00000359867 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
CSNK1E-201ENST00000359867 PDE4AP27815 886 aa17.69■□□□□ 0.42
CSNK1E-201ENST00000359867 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
CSNK1E-201ENST00000359867 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
CSNK1E-201ENST00000359867 MS4A1P11836 297 aa17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 GNAI1P63096 354 aa17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 FRAT1Q92837 279 aaPredicted RBP17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 SPG7Q9UQ90 795 aa17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 PKD1L3Q7Z443 1732 aa17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 VPS72Q15906 364 aa17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 CYP27B1O15528 508 aa17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 C1orf141Q5JVX7 400 aa17.68■□□□□ 0.42
CSNK1E-201ENST00000359867 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms