RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 NLRP1Q9C000 1473 aa5.31□□□□□ -1.56
CNGA1-201ENST00000358519 TNRQ92752 1358 aa5.31□□□□□ -1.56
CNGA1-201ENST00000358519 PHF14O94880 888 aa5.31□□□□□ -1.56
CNGA1-201ENST00000358519 GGT6Q6P531 493 aa5.31□□□□□ -1.56
CNGA1-201ENST00000358519 HIRIP3Q9BW71 556 aaPredicted RBP5.31□□□□□ -1.56
CNGA1-201ENST00000358519 TMEM131LA2VDJ0 1609 aa5.31□□□□□ -1.56
CNGA1-201ENST00000358519 NINLQ9Y2I6 1382 aa5.31□□□□□ -1.56
CNGA1-201ENST00000358519 RXRBP28702 533 aa5.3□□□□□ -1.56
CNGA1-201ENST00000358519 MED14O60244 1454 aa5.3□□□□□ -1.56
CNGA1-201ENST00000358519 SPRYD7Q5W111 196 aa5.3□□□□□ -1.56
CNGA1-201ENST00000358519 SLC52A1Q9NWF4 448 aa5.3□□□□□ -1.56
CNGA1-201ENST00000358519 PPM1GO15355 546 aaPredicted RBP5.29□□□□□ -1.56
CNGA1-201ENST00000358519 CDCA8Q53HL2 280 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 FAM43AQ8N2R8 423 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 NKX2-3Q8TAU0 364 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 CRISPLD2Q9H0B8 497 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 JCADQ9P266 1359 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 ST8SIA5O15466 376 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 HNRNPMP52272 730 aaKnown RBP eCLIP5.29□□□□□ -1.56
CNGA1-201ENST00000358519 MAP3K9P80192 1104 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 PACS2Q86VP3 889 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 NPC1L1Q9UHC9 1359 aa5.29□□□□□ -1.56
CNGA1-201ENST00000358519 C6orf132Q5T0Z8 1188 aa5.28□□□□□ -1.56
CNGA1-201ENST00000358519 CRIPAKQ8N1N5 446 aa5.28□□□□□ -1.56
CNGA1-201ENST00000358519 NEXMIFQ5QGS0 1516 aa5.28□□□□□ -1.56
CNGA1-201ENST00000358519 ERVK-7P63135 1459 aa5.28□□□□□ -1.56
CNGA1-201ENST00000358519 SCAF11Q99590 1463 aaKnown RBP5.28□□□□□ -1.56
CNGA1-201ENST00000358519 CDK12Q9NYV4 1490 aaPredicted RBP5.28□□□□□ -1.56
CNGA1-201ENST00000358519 ZNF644Q9H582 1327 aaPredicted RBP5.28□□□□□ -1.56
CNGA1-201ENST00000358519 NPM2Q86SE8 214 aaKnown RBP5.28□□□□□ -1.56
CNGA1-201ENST00000358519 SIN3AQ96ST3 1273 aa5.28□□□□□ -1.56
CNGA1-201ENST00000358519 SPATA31A6Q5VVP1 1343 aa5.28□□□□□ -1.56
CNGA1-201ENST00000358519 EIF4G2P78344 907 aaKnown RBP eCLIP5.27□□□□□ -1.57
CNGA1-201ENST00000358519 FRAT1Q92837 279 aaPredicted RBP5.27□□□□□ -1.57
CNGA1-201ENST00000358519 SIRT1Q96EB6 747 aa5.27□□□□□ -1.57
CNGA1-201ENST00000358519 EPAS1Q99814 870 aa5.27□□□□□ -1.57
CNGA1-201ENST00000358519 RRP7BPQ9NSQ0 103 aa5.27□□□□□ -1.57
CNGA1-201ENST00000358519 ADGRB2O60241 1585 aa5.27□□□□□ -1.57
CNGA1-201ENST00000358519 ANKRD26Q9UPS8 1709 aa5.27□□□□□ -1.57
CNGA1-201ENST00000358519 GDF9O60383 454 aa5.27□□□□□ -1.57
CNGA1-201ENST00000358519 HDGFP51858 240 aaKnown RBP5.27□□□□□ -1.57
CNGA1-201ENST00000358519 UBR1Q8IWV7 1749 aa5.26□□□□□ -1.57
CNGA1-201ENST00000358519 SLIT1O75093 1534 aa5.26□□□□□ -1.57
CNGA1-201ENST00000358519 HSP90AA2PQ14568 343 aaPredicted RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 RBM33Q96EV2 1170 aaKnown RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 ZNF777Q9ULD5 760 aaPredicted RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 PIK3C2GO75747 1445 aa5.26□□□□□ -1.57
CNGA1-201ENST00000358519 USP54Q70EL1 1684 aa5.26□□□□□ -1.57
CNGA1-201ENST00000358519 ARHGEF28Q8N1W1 1705 aaKnown RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 NUTM2BA6NNL0 878 aaPredicted RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 NUTM2EB1AL46 878 aaPredicted RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 NUTM2DQ5VT03 806 aaPredicted RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 SAMD7Q7Z3H4 446 aa5.26□□□□□ -1.57
CNGA1-201ENST00000358519 NUTM2AQ8IVF1 878 aaPredicted RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 EMID1Q96A84 441 aaPredicted RBP5.26□□□□□ -1.57
CNGA1-201ENST00000358519 DCAF11Q8TEB1 546 aa5.25□□□□□ -1.57
CNGA1-201ENST00000358519 NECTIN2Q92692 538 aa5.25□□□□□ -1.57
CNGA1-201ENST00000358519 QRICH2Q9H0J4 1663 aa5.25□□□□□ -1.57
CNGA1-201ENST00000358519 TERTO14746 1132 aaKnown RBP5.25□□□□□ -1.57
CNGA1-201ENST00000358519 PDE4AP27815 886 aa5.25□□□□□ -1.57
CNGA1-201ENST00000358519 NFKBIBQ15653 356 aa5.25□□□□□ -1.57
CNGA1-201ENST00000358519 ZNF697Q5TEC3 545 aa5.25□□□□□ -1.57
CNGA1-201ENST00000358519 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.25□□□□□ -1.57
CNGA1-201ENST00000358519 EID1Q9Y6B2 187 aa5.25□□□□□ -1.57
CNGA1-201ENST00000358519 ITSN1Q15811 1721 aa5.25□□□□□ -1.57
CNGA1-201ENST00000358519 ROBO1Q9Y6N7 1651 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 ATAD2Q6PL18 1390 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 PIK3R4Q99570 1358 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 A0A0U1RQG5 324 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-201ENST00000358519 RRP9O43818 475 aaKnown RBP5.24□□□□□ -1.57
CNGA1-201ENST00000358519 FBXO31Q5XUX0 539 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-201ENST00000358519 GMPR2Q9P2T1 348 aaKnown RBP5.24□□□□□ -1.57
CNGA1-201ENST00000358519 BRD4O60885 1362 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-201ENST00000358519 NSD2O96028 1365 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 ADGRB1O14514 1584 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 STRCP1A6NGW2 1772 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 TECPR2O15040 1411 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 LMOD2Q6P5Q4 547 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 PROSER2Q86WR7 435 aaPredicted RBP5.24□□□□□ -1.57
CNGA1-201ENST00000358519 ARHGAP23Q9P227 1491 aa5.24□□□□□ -1.57
CNGA1-201ENST00000358519 PHLPP1O60346 1717 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 MSH6P52701 1360 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 RNF223E7ERA6 249 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 RBM10P98175 930 aaKnown RBP5.23□□□□□ -1.57
CNGA1-201ENST00000358519 CCDC125Q86Z20 511 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 NGEFQ8N5V2 710 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 NGLY1Q96IV0 654 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 MYOM1P52179 1685 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 AVPP01185 164 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 APLP1P51693 650 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 RBM6P78332 1123 aaKnown RBP5.23□□□□□ -1.57
CNGA1-201ENST00000358519 ANKLE1Q8NAG6 615 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 SLAIN2Q9P270 581 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 CHIC2Q9UKJ5 165 aa5.23□□□□□ -1.57
CNGA1-201ENST00000358519 TMEM94Q12767 1356 aa5.22□□□□□ -1.57
CNGA1-201ENST00000358519 CCDC7Q96M83 1385 aa5.22□□□□□ -1.57
CNGA1-201ENST00000358519 RRAGDQ9NQL2 400 aaPredicted RBP5.22□□□□□ -1.57
CNGA1-201ENST00000358519 ZBED9Q6R2W3 1325 aa5.22□□□□□ -1.57
CNGA1-201ENST00000358519 USP47Q96K76 1375 aa5.22□□□□□ -1.57
CNGA1-201ENST00000358519 TNFRSF10AO00220 468 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms