RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 SUFUQ9UMX1 484 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 SYT10Q6XYQ8 523 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 SFPQP23246 707 aaKnown RBP eCLIP8.16□□□□□ -1.1
NF1-202ENST00000358273 SART3Q15020 963 aaKnown RBP8.16□□□□□ -1.1
NF1-202ENST00000358273 RABEP2Q9H5N1 569 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 MYO6Q9UM54 1294 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 GOLGA6L7A0A1B0GV03 622 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 CEP112Q8N8E3 955 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 LUZP1Q86V48 1076 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 JAKMIP3Q5VZ66 844 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 CCDC73Q6ZRK6 1079 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 PTGS1P23219 599 aa8.16□□□□□ -1.1
NF1-202ENST00000358273 JARID2Q92833 1246 aaPredicted RBP8.16□□□□□ -1.1
NF1-202ENST00000358273 SATB1Q01826 763 aa8.15□□□□□ -1.1
NF1-202ENST00000358273 UVSSAQ2YD98 709 aa8.15□□□□□ -1.1
NF1-202ENST00000358273 ERC1Q8IUD2 1116 aa8.15□□□□□ -1.1
NF1-202ENST00000358273 ANTXR1Q9H6X2 564 aa8.15□□□□□ -1.1
NF1-202ENST00000358273 ANO2Q9NQ90 1003 aa8.15□□□□□ -1.1
NF1-202ENST00000358273 NEMFO60524 1076 aa8.15□□□□□ -1.1
NF1-202ENST00000358273 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
NF1-202ENST00000358273 NUP62CLQ9H1M0 184 aa8.15□□□□□ -1.1
NF1-202ENST00000358273 KINO60870 393 aaKnown RBP8.15□□□□□ -1.1
NF1-202ENST00000358273 POLA1P09884 1462 aaPredicted RBP8.15□□□□□ -1.1
NF1-202ENST00000358273 OAS2P29728 719 aaKnown RBP8.15□□□□□ -1.1
NF1-202ENST00000358273 RBM33Q96EV2 1170 aaKnown RBP8.15□□□□□ -1.1
NF1-202ENST00000358273 ZNF445P59923 1031 aa8.15□□□□□ -1.11
NF1-202ENST00000358273 NCBP1Q09161 790 aaKnown RBP8.15□□□□□ -1.11
NF1-202ENST00000358273 GCKP35557 465 aa8.15□□□□□ -1.11
NF1-202ENST00000358273 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.11
NF1-202ENST00000358273 RSRC1Q96IZ7 334 aaKnown RBP8.15□□□□□ -1.11
NF1-202ENST00000358273 MMS22LQ6ZRQ5 1243 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 IGHDP01880 384 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 SF3A1Q15459 793 aaKnown RBP8.14□□□□□ -1.11
NF1-202ENST00000358273 FMNL3Q8IVF7 1028 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 PCMTD1Q96MG8 357 aaPredicted RBP8.14□□□□□ -1.11
NF1-202ENST00000358273 MRFAP1Q9Y605 127 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 MYO1CO00159 1063 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 MCTP2Q6DN12 878 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 ISM2Q6H9L7 571 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 U2AF1L5P0DN76 240 aaPredicted RBP8.14□□□□□ -1.11
NF1-202ENST00000358273 U2AF1Q01081 240 aaKnown RBP eCLIP8.14□□□□□ -1.112e-6■□□□□ 9.2
NF1-202ENST00000358273 RNF216Q9NWF9 866 aaPredicted RBP8.14□□□□□ -1.11
NF1-202ENST00000358273 ATP2B1P20020 1258 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 CEBPZQ03701 1054 aaKnown RBP8.14□□□□□ -1.11
NF1-202ENST00000358273 TMED8Q6PL24 325 aaPredicted RBP8.14□□□□□ -1.11
NF1-202ENST00000358273 A0A1B0GUA9 196 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 ERLIN2O94905 339 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 GOLGA5Q8TBA6 731 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 RILPL2Q969X0 211 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 ANKRD36BQ8N2N9 1353 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 BLMP54132 1417 aaPredicted RBP8.14□□□□□ -1.11
NF1-202ENST00000358273 CEP57L1Q8IYX8 460 aa8.14□□□□□ -1.11
NF1-202ENST00000358273 BIN2Q9UBW5 565 aaPredicted RBP8.14□□□□□ -1.11
NF1-202ENST00000358273 FAM160A1Q05DH4 1040 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 POTEB2H3BUK9 544 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 NBPF8Q3BBV2 869 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 NINQ8N4C6 2090 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 CASTP20810 708 aaKnown RBP8.13□□□□□ -1.11
NF1-202ENST00000358273 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
NF1-202ENST00000358273 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 NBPF6Q5VWK0 638 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 NBPF5PQ86XG9 351 aaPredicted RBP8.13□□□□□ -1.11
NF1-202ENST00000358273 NBPF4Q96M43 638 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 RAI14Q9P0K7 980 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 ODF2Q5BJF6 829 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 CEP120Q8N960 986 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 IRAK4Q9NWZ3 460 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 SKILP12757 684 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 CKAP2LQ8IYA6 745 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 SPATS2LQ9NUQ6 558 aaKnown RBP8.13□□□□□ -1.11
NF1-202ENST00000358273 GOLGA6L10A6NI86 522 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 SNX21Q969T3 373 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 SLC20A2Q08357 652 aa8.13□□□□□ -1.11
NF1-202ENST00000358273 ROCK1Q13464 1354 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 ERO1AQ96HE7 468 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 CCDC144AA2RUR9 1427 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 TAX1BP1Q86VP1 789 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 CCDC97Q96F63 343 aaPredicted RBP8.12□□□□□ -1.11
NF1-202ENST00000358273 ZSWIM4Q9H7M6 989 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 THOC2Q8NI27 1593 aaKnown RBP8.12□□□□□ -1.11
NF1-202ENST00000358273 NBPF11Q86T75 865 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 TERF2IPQ9NYB0 399 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
NF1-202ENST00000358273 MSL1Q68DK7 614 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 FAM135AQ9P2D6 1515 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 MAP9Q49MG5 647 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 RASSF8Q8NHQ8 419 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 SLC24A3Q9HC58 644 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 PHACTR2O75167 634 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 MICALCLQ6ZW33 695 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 MRFAP1L1Q96HT8 127 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 CCDC196A0A1B0GTZ2 297 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 PEX19P40855 299 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 CHD1LQ86WJ1 897 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 NUP133Q8WUM0 1156 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 GOLGA6L10A0A0M3HER8 536 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 TMCO4Q5TGY1 634 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 TBC1D9Q6ZT07 1266 aa8.12□□□□□ -1.11
NF1-202ENST00000358273 MCM6Q14566 821 aa8.11□□□□□ -1.11
NF1-202ENST00000358273 TMX4Q9H1E5 349 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms