RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 PNPLA6Q8IY17 1366 aa9.35□□□□□ -0.91
CD46-204ENST00000357714 FAM83GA6ND36 823 aa9.35□□□□□ -0.91
CD46-204ENST00000357714 LMOD3Q0VAK6 560 aa9.35□□□□□ -0.91
CD46-204ENST00000357714 CFAP65Q6ZU64 1925 aaKnown RBP9.35□□□□□ -0.91
CD46-204ENST00000357714 DCTN1Q14203 1278 aa9.35□□□□□ -0.91
CD46-204ENST00000357714 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
CD46-204ENST00000357714 MROH1Q8NDA8 1641 aa9.35□□□□□ -0.91
CD46-204ENST00000357714 PPRC1Q5VV67 1664 aaKnown RBP9.35□□□□□ -0.91
CD46-204ENST00000357714 IFT172Q9UG01 1749 aa9.35□□□□□ -0.91
CD46-204ENST00000357714 INO80Q9ULG1 1556 aaPredicted RBP9.35□□□□□ -0.91
CD46-204ENST00000357714 CEP85Q6P2H3 762 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 CDK19Q9BWU1 502 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 GDPD2Q9HCC8 539 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 FAM135BQ49AJ0 1406 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 PHF14O94880 888 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 ZNF853P0CG23 659 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 MCCP23508 829 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 SMAP1Q8IYB5 467 aaPredicted RBP9.34□□□□□ -0.91
CD46-204ENST00000357714 ZNF830Q96NB3 372 aaPredicted RBP9.34□□□□□ -0.91
CD46-204ENST00000357714 GLI2P10070 1586 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 ABCA9Q8IUA7 1624 aa9.34□□□□□ -0.91
CD46-204ENST00000357714 LRRC7Q96NW7 1537 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 MCM2P49736 904 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 FGD1P98174 961 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
CD46-204ENST00000357714 HMMRO75330 724 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 BRD1O95696 1058 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 ZFYVE9O95405 1425 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 REREQ9P2R6 1566 aa9.33□□□□□ -0.92
CD46-204ENST00000357714 TSC1Q92574 1164 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 MEIS3Q99687 375 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 USP25Q9UHP3 1055 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 KRT24Q2M2I5 525 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 CCDC94Q9BW85 323 aaPredicted RBP9.32□□□□□ -0.92
CD46-204ENST00000357714 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
CD46-204ENST00000357714 HMGN5P82970 282 aaKnown RBP9.32□□□□□ -0.92
CD46-204ENST00000357714 IDI1Q13907 227 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 TSHZ3Q63HK5 1081 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 SLC4A10Q6U841 1118 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 MYRIPQ8NFW9 859 aa9.32□□□□□ -0.92
CD46-204ENST00000357714 JARID2Q92833 1246 aaPredicted RBP9.32□□□□□ -0.92
CD46-204ENST00000357714 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
CD46-204ENST00000357714 UPF3BQ9BZI7 483 aaKnown RBP9.31□□□□□ -0.92
CD46-204ENST00000357714 RIMBP3CA6NJZ7 1639 aa9.31□□□□□ -0.92
CD46-204ENST00000357714 RIMBP3BA6NNM3 1639 aa9.31□□□□□ -0.92
CD46-204ENST00000357714 RIMBP3Q9UFD9 1639 aa9.31□□□□□ -0.92
CD46-204ENST00000357714 LMTK2Q8IWU2 1503 aa9.31□□□□□ -0.92
CD46-204ENST00000357714 KIF24Q5T7B8 1368 aa9.31□□□□□ -0.92
CD46-204ENST00000357714 GADD45BO75293 160 aaPredicted RBP9.31□□□□□ -0.92
CD46-204ENST00000357714 PDE1AP54750 535 aa9.31□□□□□ -0.92
CD46-204ENST00000357714 NOLC1Q14978 699 aaKnown RBP eCLIP9.31□□□□□ -0.922e-8■■■□□ 18.1
CD46-204ENST00000357714 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.31□□□□□ -0.92
CD46-204ENST00000357714 RILPL2Q969X0 211 aa9.31□□□□□ -0.92
CD46-204ENST00000357714 TTC12Q9H892 705 aaPredicted RBP9.31□□□□□ -0.92
CD46-204ENST00000357714 IL13P35225 146 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 FAM184AQ8NB25 1140 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 USP48Q86UV5 1035 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 C17orf53Q8N3J3 647 aaPredicted RBP9.3□□□□□ -0.92
CD46-204ENST00000357714 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 PPLO60437 1756 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 MSH6P52701 1360 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 PIBF1Q8WXW3 757 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 PALD1Q9ULE6 856 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 EXOC6BQ9Y2D4 811 aa9.3□□□□□ -0.92
CD46-204ENST00000357714 RTL1A6NKG5 1358 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 FAM177BA6PVY3 158 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 ADCY5O95622 1261 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 ESYT1Q9BSJ8 1104 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 ATP10DQ9P241 1426 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 WDR33Q9C0J8 1336 aaKnown RBP9.29□□□□□ -0.92
CD46-204ENST00000357714 CD163L1Q9NR16 1453 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 SLC4A2P04920 1241 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 HCLS1P14317 486 aaPredicted RBP9.29□□□□□ -0.92
CD46-204ENST00000357714 CBX1P83916 185 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 CUL4AQ13619 759 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 RRS1Q15050 365 aaKnown RBP9.29□□□□□ -0.92
CD46-204ENST00000357714 INTS4Q96HW7 963 aaKnown RBP9.29□□□□□ -0.92
CD46-204ENST00000357714 KIF3AQ9Y496 699 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 RIMS2Q9UQ26 1411 aa9.29□□□□□ -0.92
CD46-204ENST00000357714 UVSSAQ2YD98 709 aa9.28□□□□□ -0.92
CD46-204ENST00000357714 NME9Q86XW9 330 aa9.28□□□□□ -0.92
CD46-204ENST00000357714 YTHDC2Q9H6S0 1430 aaKnown RBP9.28□□□□□ -0.92
CD46-204ENST00000357714 STAG3Q9UJ98 1225 aa9.28□□□□□ -0.92
CD46-204ENST00000357714 ARHGEF28Q8N1W1 1705 aaKnown RBP9.28□□□□□ -0.92
CD46-204ENST00000357714 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
CD46-204ENST00000357714 CAMSAP1Q5T5Y3 1602 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 F6X3S4 739 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 CCDC183Q5T5S1 534 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 MCM10Q7L590 875 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 PTPRCP08575 1304 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 ANAPC15P60006 121 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 CHAF1AQ13111 956 aaPredicted RBP9.27□□□□□ -0.93
CD46-204ENST00000357714 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 COG3Q96JB2 828 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 OSBPL3Q9H4L5 887 aa9.27□□□□□ -0.93
CD46-204ENST00000357714 MX1P20591 662 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms