RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TEFQ10587 303 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 TCEAL9Q9UHQ7 104 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 CACNA1FO60840 1977 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 IGF1RP08069 1367 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 ODF2Q5BJF6 829 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 NAP1L1P55209 391 aaKnown RBP7.68□□□□□ -1.18
VPS13B-202ENST00000357162 GIGYF2Q6Y7W6 1299 aaKnown RBP7.68□□□□□ -1.18
VPS13B-202ENST00000357162 FANCD2Q9BXW9 1451 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 SPATA32Q96LK8 384 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 KNTC1P50748 2209 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 GCOM1H8Y6P7 765 aaPredicted RBP7.68□□□□□ -1.18
VPS13B-202ENST00000357162 MYZAPP0CAP1 466 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 SLC4A10Q6U841 1118 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 FMNL2Q96PY5 1086 aa7.68□□□□□ -1.18
VPS13B-202ENST00000357162 NACAP1Q9BZK3 213 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 ARFGAP3Q9NP61 516 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 GNL3LQ9NVN8 582 aaKnown RBP7.67□□□□□ -1.18
VPS13B-202ENST00000357162 CKAP4Q07065 602 aaKnown RBP7.67□□□□□ -1.18
VPS13B-202ENST00000357162 TTC5Q8N0Z6 440 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 ARHGAP45Q92619 1136 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 PPFIA3O75145 1194 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 CROCCP2Q86T23 111 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 PTPRGP23470 1445 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 NOL7Q9UMY1 257 aaKnown RBP7.67□□□□□ -1.18
VPS13B-202ENST00000357162 SPAG1Q07617 926 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 ZSCAN25Q6NSZ9 544 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 INTS4Q96HW7 963 aaKnown RBP7.67□□□□□ -1.18
VPS13B-202ENST00000357162 APBB1O00213 710 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 TTC14Q96N46 770 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 SERPINC1P01008 464 aa7.67□□□□□ -1.18
VPS13B-202ENST00000357162 FKBP5Q13451 457 aaPredicted RBP7.67□□□□□ -1.18
VPS13B-202ENST00000357162 BMP2KQ9NSY1 1161 aaPredicted RBP7.67□□□□□ -1.18
VPS13B-202ENST00000357162 SNAPC4Q5SXM2 1469 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 SOS1Q07889 1333 aaPredicted RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 DNAJC21Q5F1R6 531 aaKnown RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 CHD1LQ86WJ1 897 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 IQCDQ96DY2 449 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 DNAI2Q9GZS0 605 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 MKRN1Q9UHC7 482 aaKnown RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 SYNJ2O15056 1496 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 RAD50Q92878 1312 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 ME1P48163 572 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 PLVAPQ9BX97 442 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 ARAP1Q96P48 1450 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 CCDC175P0C221 793 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 FAM200AQ8TCP9 573 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 RBM33Q96EV2 1170 aaKnown RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 PCMTD1Q96MG8 357 aaPredicted RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 ADAMTS8Q9UP79 889 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 PTPN23Q9H3S7 1636 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 TROQ12816 1431 aaPredicted RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 CLUL1Q15846 466 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 PRPF40AO75400 957 aaKnown RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 CEP128Q6ZU80 1094 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 POTEDQ86YR6 584 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 CCAR1Q8IX12 1150 aaKnown RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 RNF214Q8ND24 703 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 CTAGE1Q96RT6 745 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 CCDC181Q5TID7 509 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 SLC52A1Q9NWF4 448 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 ELP1O95163 1332 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 IFI16Q16666 785 aaKnown RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 LARP1BQ659C4 914 aaKnown RBP7.66□□□□□ -1.18
VPS13B-202ENST00000357162 B4GALNT4Q76KP1 1039 aa7.66□□□□□ -1.18
VPS13B-202ENST00000357162 ERBINQ96RT1 1412 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 CFTRP13569 1480 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 HDAC1Q13547 482 aaPredicted RBP7.65□□□□□ -1.18
VPS13B-202ENST00000357162 NFXL1Q6ZNB6 911 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 TACO1Q9BSH4 297 aaKnown RBP7.65□□□□□ -1.18
VPS13B-202ENST00000357162 PIP4K2BP78356 416 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 SPA17Q15506 151 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 TCP11L2Q8N4U5 519 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 SWAP70Q9UH65 585 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 APC2O95996 2303 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 USO1O60763 962 aaKnown RBP7.65□□□□□ -1.18
VPS13B-202ENST00000357162 PPP2R1AP30153 589 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 SPATS2Q86XZ4 545 aaKnown RBP7.65□□□□□ -1.18
VPS13B-202ENST00000357162 ZSCAN16Q9H4T2 348 aaPredicted RBP7.65□□□□□ -1.18
VPS13B-202ENST00000357162 ZNF318Q5VUA4 2279 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 PRPHP41219 470 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 SF3B2Q13435 895 aaKnown RBP7.65□□□□□ -1.18
VPS13B-202ENST00000357162 NSRP1Q9H0G5 558 aaKnown RBP7.65□□□□□ -1.18
VPS13B-202ENST00000357162 PDZRN3Q9UPQ7 1066 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 NPC1L1Q9UHC9 1359 aa7.65□□□□□ -1.18
VPS13B-202ENST00000357162 NUMA1Q14980 2115 aa7.65□□□□□ -1.19
VPS13B-202ENST00000357162 FIBPO43427 364 aa7.65□□□□□ -1.19
VPS13B-202ENST00000357162 FAM114A1Q8IWE2 563 aa7.65□□□□□ -1.19
VPS13B-202ENST00000357162 PUS7Q96PZ0 661 aaKnown RBP7.65□□□□□ -1.19
VPS13B-202ENST00000357162 OGFRQ9NZT2 677 aa7.65□□□□□ -1.19
VPS13B-202ENST00000357162 NUTM1Q86Y26 1132 aa7.65□□□□□ -1.19
VPS13B-202ENST00000357162 FAM135AQ9P2D6 1515 aa7.65□□□□□ -1.19
VPS13B-202ENST00000357162 SPAG17Q6Q759 2223 aa7.65□□□□□ -1.19
VPS13B-202ENST00000357162 HNRNPMP52272 730 aaKnown RBP eCLIP7.65□□□□□ -1.193e-7■■■■■ 30.8
VPS13B-202ENST00000357162 A0A1B0GUA9 196 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 CCDC172P0C7W6 258 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 SYNJ1O43426 1573 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 OPA1O60313 960 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 ZKSCAN5Q9Y2L8 839 aa7.64□□□□□ -1.19
VPS13B-202ENST00000357162 GLRX3O76003 335 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms