RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 C11orf95C9JLR9 678 aaPredicted RBP13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 STAMBPO95630 424 aa13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 LUZP1Q86V48 1076 aa13.45□□□□□ -0.26
SPTBN1-202ENST00000356805 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.45□□□□□ -0.269e-9■□□□□ 10.6
SPTBN1-202ENST00000356805 POTEJP0CG39 1038 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 PDZRN3Q9UPQ7 1066 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 DHX29Q7Z478 1369 aaKnown RBP13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 NLRP6P59044 892 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 HS1BP3Q53T59 392 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 TDO2P48775 406 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 PAXBP1Q9Y5B6 917 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 GNAI2P04899 355 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 EIF5P55010 431 aaKnown RBP13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 WDR70Q9NW82 654 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 ESCO1Q5FWF5 840 aa13.44□□□□□ -0.26
SPTBN1-202ENST00000356805 IVLP07476 585 aa13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 GOLGA6L9A6NEM1 432 aa13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 NUP62CLQ9H1M0 184 aa13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 TUBB4AP04350 444 aa13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 TAF4BQ92750 862 aa13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 PUS7Q96PZ0 661 aaKnown RBP13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 SFPQP23246 707 aaKnown RBP eCLIP13.43□□□□□ -0.263e-7■■□□□ 12.2
SPTBN1-202ENST00000356805 CABP4P57796 275 aa13.43□□□□□ -0.26
SPTBN1-202ENST00000356805 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 BMS1Q14692 1282 aaKnown RBP13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 EPB41L2O43491 1005 aaKnown RBP13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 MAP3K11Q16584 847 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 BCCIPQ9P287 314 aaKnown RBP eCLIP13.42□□□□□ -0.266e-7■□□□□ 9.3
SPTBN1-202ENST00000356805 GRIPAP1Q4V328 841 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 TICAM2Q86XR7 235 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 CCDC148Q8NFR7 591 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 DNAI2Q9GZS0 605 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 COMMD10Q9Y6G5 202 aa13.42□□□□□ -0.26
SPTBN1-202ENST00000356805 PDS5BQ9NTI5 1447 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 GSDMDP57764 484 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 GPRASP1Q5JY77 1395 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 AKNAQ7Z591 1439 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 UVSSAQ2YD98 709 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 CTNNBL1Q8WYA6 563 aaPredicted RBP13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 UBAC1Q9BSL1 405 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 TUBB4BP68371 445 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 LARP1BQ659C4 914 aaKnown RBP13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 TTC16Q8NEE8 873 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 KRT222Q8N1A0 295 aa13.41□□□□□ -0.26
SPTBN1-202ENST00000356805 PLEKHO1Q53GL0 409 aaPredicted RBP13.4□□□□□ -0.26
SPTBN1-202ENST00000356805 CCDC178Q5BJE1 867 aa13.4□□□□□ -0.26
SPTBN1-202ENST00000356805 CCDC83Q8IWF9 413 aa13.4□□□□□ -0.26
SPTBN1-202ENST00000356805 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
SPTBN1-202ENST00000356805 CBX1P83916 185 aa13.4□□□□□ -0.26
SPTBN1-202ENST00000356805 CECR2Q9BXF3 1484 aa13.4□□□□□ -0.26
SPTBN1-202ENST00000356805 SPATA32Q96LK8 384 aa13.4□□□□□ -0.26
SPTBN1-202ENST00000356805 IMMTQ16891 758 aaKnown RBP13.4□□□□□ -0.27
SPTBN1-202ENST00000356805 CDKL5O76039 1030 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 PPP1R12BO60237 982 aaPredicted RBP13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 CTAGE5O15320 804 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 PPP4R3AQ6IN85 833 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 GSTTP1A0A1W2PQM5 241 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 CETN2P41208 172 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 PPM1EQ8WY54 764 aa13.39□□□□□ -0.27
SPTBN1-202ENST00000356805 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 DDX23Q9BUQ8 820 aaKnown RBP13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 DNA2P51530 1060 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 TNIP1Q15025 636 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 WDR63Q8IWG1 891 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 SEC63Q9UGP8 760 aaKnown RBP13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 SCAND2PQ9GZW5 306 aaPredicted RBP13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 RAI14Q9P0K7 980 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 MACROD2A1Z1Q3 448 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 TNNT1P13805 278 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 CCDC150Q8NCX0 1101 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 TOM1L2Q6ZVM7 507 aa13.38□□□□□ -0.27
SPTBN1-202ENST00000356805 CASQ1P31415 396 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 CWC27Q6UX04 472 aaKnown RBP13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 AACSQ86V21 672 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 KIF20AO95235 890 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 TATP17735 454 aaPredicted RBP13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 IRX3P78415 501 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms