RNA–Protein interactions for RNA: ENST00000349299.7

H2AFV-203, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-203ENST00000349299 ERBB3P21860 1342 aa13.14□□□□□ -0.31
H2AFV-203ENST00000349299 WDR17Q8IZU2 1322 aa13.14□□□□□ -0.31
H2AFV-203ENST00000349299 PARP4Q9UKK3 1724 aaKnown RBP13.14□□□□□ -0.31
H2AFV-203ENST00000349299 PPM1GO15355 546 aaPredicted RBP13.14□□□□□ -0.31
H2AFV-203ENST00000349299 POTEAQ6S8J7 498 aa13.14□□□□□ -0.31
H2AFV-203ENST00000349299 THSD7AQ9UPZ6 1657 aa13.13□□□□□ -0.31
H2AFV-203ENST00000349299 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
H2AFV-203ENST00000349299 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
H2AFV-203ENST00000349299 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
H2AFV-203ENST00000349299 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
H2AFV-203ENST00000349299 CSB-PGBD3P0DP91 1061 aa13.12□□□□□ -0.31
H2AFV-203ENST00000349299 RALBP1Q15311 655 aa13.12□□□□□ -0.31
H2AFV-203ENST00000349299 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
H2AFV-203ENST00000349299 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
H2AFV-203ENST00000349299 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
H2AFV-203ENST00000349299 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
H2AFV-203ENST00000349299 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
H2AFV-203ENST00000349299 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
H2AFV-203ENST00000349299 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
H2AFV-203ENST00000349299 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
H2AFV-203ENST00000349299 MTHFSP49914 203 aa13.11□□□□□ -0.31
H2AFV-203ENST00000349299 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
H2AFV-203ENST00000349299 TOM1L2Q6ZVM7 507 aa13.11□□□□□ -0.31
H2AFV-203ENST00000349299 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
H2AFV-203ENST00000349299 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
H2AFV-203ENST00000349299 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
H2AFV-203ENST00000349299 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
H2AFV-203ENST00000349299 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
H2AFV-203ENST00000349299 PRKRIP1Q9H875 184 aaPredicted RBP13.1□□□□□ -0.31
H2AFV-203ENST00000349299 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
H2AFV-203ENST00000349299 RXRBP28702 533 aa13.09□□□□□ -0.31
H2AFV-203ENST00000349299 VASPP50552 380 aaPredicted RBP13.09□□□□□ -0.31
H2AFV-203ENST00000349299 NUBP1P53384 320 aa13.09□□□□□ -0.31
H2AFV-203ENST00000349299 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
H2AFV-203ENST00000349299 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
H2AFV-203ENST00000349299 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
H2AFV-203ENST00000349299 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
H2AFV-203ENST00000349299 EIF4A2Q14240 407 aaKnown RBP13.08□□□□□ -0.32
H2AFV-203ENST00000349299 NLRP2Q9NX02 1062 aa13.08□□□□□ -0.32
H2AFV-203ENST00000349299 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
H2AFV-203ENST00000349299 THRAP3Q9Y2W1 955 aaKnown RBP13.08□□□□□ -0.32
H2AFV-203ENST00000349299 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
H2AFV-203ENST00000349299 RGS12O14924 1447 aa13.07□□□□□ -0.32
H2AFV-203ENST00000349299 TCP11L2Q8N4U5 519 aa13.07□□□□□ -0.32
H2AFV-203ENST00000349299 DISP2A7MBM2 1401 aa13.06□□□□□ -0.32
H2AFV-203ENST00000349299 FAM98CQ17RN3 349 aaKnown RBP13.06□□□□□ -0.32
H2AFV-203ENST00000349299 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
H2AFV-203ENST00000349299 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
H2AFV-203ENST00000349299 ANP32CO43423 234 aa13.05□□□□□ -0.32
H2AFV-203ENST00000349299 NBPF6Q5VWK0 638 aa13.05□□□□□ -0.32
H2AFV-203ENST00000349299 NBPF4Q96M43 638 aa13.05□□□□□ -0.32
H2AFV-203ENST00000349299 EYA1Q99502 592 aa13.05□□□□□ -0.32
H2AFV-203ENST00000349299 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
H2AFV-203ENST00000349299 ONECUT3O60422 494 aaPredicted RBP13.04□□□□□ -0.32
H2AFV-203ENST00000349299 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
H2AFV-203ENST00000349299 IL13P35225 146 aa13.04□□□□□ -0.32
H2AFV-203ENST00000349299 USHBP1Q8N6Y0 703 aa13.04□□□□□ -0.32
H2AFV-203ENST00000349299 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
H2AFV-203ENST00000349299 MEGF6O75095 1541 aa13.03□□□□□ -0.32
H2AFV-203ENST00000349299 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
H2AFV-203ENST00000349299 A0A0G2JS52 829 aa13.02□□□□□ -0.33
H2AFV-203ENST00000349299 MYT1Q01538 1121 aa13.02□□□□□ -0.33
H2AFV-203ENST00000349299 SEPT12Q8IYM1 358 aa13.02□□□□□ -0.33
H2AFV-203ENST00000349299 CDCA7Q9BWT1 371 aaPredicted RBP13.02□□□□□ -0.33
H2AFV-203ENST00000349299 DLG5Q8TDM6 1919 aa13.01□□□□□ -0.33
H2AFV-203ENST00000349299 IL2RBP14784 551 aa13.01□□□□□ -0.33
H2AFV-203ENST00000349299 KDRP35968 1356 aa13.01□□□□□ -0.33
H2AFV-203ENST00000349299 OVOS2A0A0G2JMS6 1433 aa13.01□□□□□ -0.33
H2AFV-203ENST00000349299 TNS2Q63HR2 1409 aa13.01□□□□□ -0.33
H2AFV-203ENST00000349299 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
H2AFV-203ENST00000349299 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
H2AFV-203ENST00000349299 NUDCQ9Y266 331 aa13□□□□□ -0.33
H2AFV-203ENST00000349299 DOT1LQ8TEK3 1739 aa12.99□□□□□ -0.33
H2AFV-203ENST00000349299 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
H2AFV-203ENST00000349299 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
H2AFV-203ENST00000349299 RAPGEF4Q8WZA2 1011 aa12.99□□□□□ -0.33
H2AFV-203ENST00000349299 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
H2AFV-203ENST00000349299 DCBLD2Q96PD2 775 aa12.99□□□□□ -0.33
H2AFV-203ENST00000349299 ITGB4P16144 1822 aa12.99□□□□□ -0.33
H2AFV-203ENST00000349299 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
H2AFV-203ENST00000349299 DDB1Q16531 1140 aa12.98□□□□□ -0.33
H2AFV-203ENST00000349299 SULT6B1Q6IMI4 303 aa12.98□□□□□ -0.33
H2AFV-203ENST00000349299 AEBP1Q8IUX7 1158 aa12.98□□□□□ -0.33
H2AFV-203ENST00000349299 SCN11AQ9UI33 1791 aa12.98□□□□□ -0.33
H2AFV-203ENST00000349299 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
H2AFV-203ENST00000349299 EXOC5O00471 708 aa12.97□□□□□ -0.33
H2AFV-203ENST00000349299 HMOX1P09601 288 aa12.97□□□□□ -0.33
H2AFV-203ENST00000349299 ILDR2Q71H61 639 aa12.97□□□□□ -0.33
H2AFV-203ENST00000349299 PDE3BQ13370 1112 aa12.96□□□□□ -0.33
H2AFV-203ENST00000349299 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
H2AFV-203ENST00000349299 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.34
H2AFV-203ENST00000349299 NHSQ6T4R5 1651 aa12.96□□□□□ -0.34
H2AFV-203ENST00000349299 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
H2AFV-203ENST00000349299 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.348e-7■□□□□ 8.6
H2AFV-203ENST00000349299 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
H2AFV-203ENST00000349299 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
H2AFV-203ENST00000349299 ADAMTS7Q9UKP4 1686 aa12.93□□□□□ -0.34
H2AFV-203ENST00000349299 BTAF1O14981 1849 aa12.93□□□□□ -0.34
H2AFV-203ENST00000349299 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
H2AFV-203ENST00000349299 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms