RNA–Protein interactions for RNA: ENST00000348161.8

TOM1L1-201, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-201ENST00000348161 KDRP35968 1356 aa20.47■□□□□ 0.87
TOM1L1-201ENST00000348161 OVOS2A0A0G2JMS6 1433 aa20.46■□□□□ 0.87
TOM1L1-201ENST00000348161 MEGF6O75095 1541 aa20.46■□□□□ 0.87
TOM1L1-201ENST00000348161 FAM196AQ6ZSG2 479 aa20.46■□□□□ 0.87
TOM1L1-201ENST00000348161 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
TOM1L1-201ENST00000348161 FAM182BQ5T319 152 aa20.45■□□□□ 0.86
TOM1L1-201ENST00000348161 TNS2Q63HR2 1409 aa20.45■□□□□ 0.86
TOM1L1-201ENST00000348161 FCHSD2O94868 740 aa20.45■□□□□ 0.86
TOM1L1-201ENST00000348161 NEFMP07197 916 aa20.45■□□□□ 0.86
TOM1L1-201ENST00000348161 MARCH10Q8NA82 808 aaPredicted RBP20.45■□□□□ 0.86
TOM1L1-201ENST00000348161 PNNQ9H307 717 aaKnown RBP20.45■□□□□ 0.86
TOM1L1-201ENST00000348161 RGPD2P0DJD1 1756 aa20.45■□□□□ 0.86
TOM1L1-201ENST00000348161 PCDH11XQ9BZA7 1347 aa20.44■□□□□ 0.86
TOM1L1-201ENST00000348161 PCDH11YQ9BZA8 1340 aa20.44■□□□□ 0.86
TOM1L1-201ENST00000348161 PLEKHG2Q9H7P9 1386 aa20.44■□□□□ 0.86
TOM1L1-201ENST00000348161 MRS2Q9HD23 443 aa20.43■□□□□ 0.86
TOM1L1-201ENST00000348161 PARP4Q9UKK3 1724 aaKnown RBP20.43■□□□□ 0.86
TOM1L1-201ENST00000348161 PRKAR2BP31323 418 aa20.41■□□□□ 0.86
TOM1L1-201ENST00000348161 IFNL2Q8IZJ0 200 aa20.41■□□□□ 0.86
TOM1L1-201ENST00000348161 RSPH6AQ9H0K4 717 aa20.4■□□□□ 0.86
TOM1L1-201ENST00000348161 LRRC37A3O60309 1634 aa20.4■□□□□ 0.86
TOM1L1-201ENST00000348161 C1orf141Q5JVX7 400 aa20.39■□□□□ 0.86
TOM1L1-201ENST00000348161 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.85
TOM1L1-201ENST00000348161 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
TOM1L1-201ENST00000348161 CYP27B1O15528 508 aa20.38■□□□□ 0.85
TOM1L1-201ENST00000348161 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
TOM1L1-201ENST00000348161 SF3B2Q13435 895 aaKnown RBP20.37■□□□□ 0.85
TOM1L1-201ENST00000348161 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
TOM1L1-201ENST00000348161 PHKG2P15735 406 aa20.37■□□□□ 0.85
TOM1L1-201ENST00000348161 CCDC184Q52MB2 194 aa20.37■□□□□ 0.85
TOM1L1-201ENST00000348161 CCDC125Q86Z20 511 aa20.37■□□□□ 0.85
TOM1L1-201ENST00000348161 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
TOM1L1-201ENST00000348161 BRWD3Q6RI45 1802 aa20.36■□□□□ 0.85
TOM1L1-201ENST00000348161 ADAMTS8Q9UP79 889 aa20.36■□□□□ 0.85
TOM1L1-201ENST00000348161 MAPK8IP3Q9UPT6 1336 aa20.36■□□□□ 0.85
TOM1L1-201ENST00000348161 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
TOM1L1-201ENST00000348161 TRIM37O94972 964 aa20.35■□□□□ 0.85
TOM1L1-201ENST00000348161 PHACTR3Q96KR7 559 aa20.35■□□□□ 0.85
TOM1L1-201ENST00000348161 BCL9O00512 1426 aa20.34■□□□□ 0.85
TOM1L1-201ENST00000348161 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
TOM1L1-201ENST00000348161 SYTL4Q96C24 671 aaPredicted RBP20.34■□□□□ 0.85
TOM1L1-201ENST00000348161 ACSBG1Q96GR2 724 aa20.34■□□□□ 0.85
TOM1L1-201ENST00000348161 NKX1-1Q15270 411 aaPredicted RBP20.33■□□□□ 0.85
TOM1L1-201ENST00000348161 UPF1Q92900 1129 aaKnown RBP eCLIP20.33■□□□□ 0.85
TOM1L1-201ENST00000348161 SOCS7O14512 581 aa20.33■□□□□ 0.84
TOM1L1-201ENST00000348161 DCAF5Q96JK2 942 aa20.33■□□□□ 0.84
TOM1L1-201ENST00000348161 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
TOM1L1-201ENST00000348161 PLEKHF1Q96S99 279 aa20.32■□□□□ 0.84
TOM1L1-201ENST00000348161 BCL11BQ9C0K0 894 aaPredicted RBP20.32■□□□□ 0.84
TOM1L1-201ENST00000348161 CCER2I3L3R5 266 aa20.31■□□□□ 0.84
TOM1L1-201ENST00000348161 EP400Q96L91 3159 aa20.31■□□□□ 0.84
TOM1L1-201ENST00000348161 PRIM1P49642 420 aaKnown RBP20.3■□□□□ 0.84
TOM1L1-201ENST00000348161 RUNDC1Q96C34 613 aa20.3■□□□□ 0.84
TOM1L1-201ENST00000348161 GNAT3A8MTJ3 354 aa20.29■□□□□ 0.84
TOM1L1-201ENST00000348161 KCNQ2O43526 872 aa20.29■□□□□ 0.84
TOM1L1-201ENST00000348161 MPRIPQ6WCQ1 1025 aa20.29■□□□□ 0.84
TOM1L1-201ENST00000348161 MIER1Q8N108 512 aa20.29■□□□□ 0.84
TOM1L1-201ENST00000348161 RTF1Q92541 710 aaKnown RBP20.29■□□□□ 0.84
TOM1L1-201ENST00000348161 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
TOM1L1-201ENST00000348161 PKD1L3Q7Z443 1732 aa20.28■□□□□ 0.84
TOM1L1-201ENST00000348161 APBA3O96018 575 aa20.28■□□□□ 0.84
TOM1L1-201ENST00000348161 FAM9BQ8IZU0 186 aa20.28■□□□□ 0.84
TOM1L1-201ENST00000348161 ERVV-2B6SEH9 535 aa20.26■□□□□ 0.83
TOM1L1-201ENST00000348161 BAG6P46379 1132 aa20.26■□□□□ 0.83
TOM1L1-201ENST00000348161 CABP4P57796 275 aa20.26■□□□□ 0.83
TOM1L1-201ENST00000348161 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
TOM1L1-201ENST00000348161 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
TOM1L1-201ENST00000348161 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
TOM1L1-201ENST00000348161 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
TOM1L1-201ENST00000348161 RNMTO43148 476 aaKnown RBP20.23■□□□□ 0.83
TOM1L1-201ENST00000348161 RIPK4P57078 832 aa20.23■□□□□ 0.83
TOM1L1-201ENST00000348161 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
TOM1L1-201ENST00000348161 SHANK3Q9BYB0 1731 aa20.23■□□□□ 0.83
TOM1L1-201ENST00000348161 LGR6Q9HBX8 967 aa20.23■□□□□ 0.83
TOM1L1-201ENST00000348161 NEUROD2Q15784 382 aa20.22■□□□□ 0.83
TOM1L1-201ENST00000348161 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
TOM1L1-201ENST00000348161 TEFQ10587 303 aa20.22■□□□□ 0.83
TOM1L1-201ENST00000348161 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
TOM1L1-201ENST00000348161 PLSCR1O15162 318 aa20.21■□□□□ 0.83
TOM1L1-201ENST00000348161 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
TOM1L1-201ENST00000348161 PIGBQ92521 554 aa20.21■□□□□ 0.83
TOM1L1-201ENST00000348161 IL17REQ8NFR9 667 aa20.2■□□□□ 0.82
TOM1L1-201ENST00000348161 KDM6AO15550 1401 aaPredicted RBP20.2■□□□□ 0.82
TOM1L1-201ENST00000348161 APAF1O14727 1248 aa20.2■□□□□ 0.82
TOM1L1-201ENST00000348161 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
TOM1L1-201ENST00000348161 DEFB132Q7Z7B7 95 aa20.2■□□□□ 0.82
TOM1L1-201ENST00000348161 SLC52A2Q9HAB3 445 aa20.2■□□□□ 0.82
TOM1L1-201ENST00000348161 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
TOM1L1-201ENST00000348161 MCM10Q7L590 875 aa20.19■□□□□ 0.82
TOM1L1-201ENST00000348161 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
TOM1L1-201ENST00000348161 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
TOM1L1-201ENST00000348161 DCTN1Q14203 1278 aa20.17■□□□□ 0.82
TOM1L1-201ENST00000348161 NHSQ6T4R5 1651 aa20.15■□□□□ 0.82
TOM1L1-201ENST00000348161 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
TOM1L1-201ENST00000348161 CAMKK2Q96RR4 588 aa20.15■□□□□ 0.82
TOM1L1-201ENST00000348161 CEMIPQ8WUJ3 1361 aa20.15■□□□□ 0.82
TOM1L1-201ENST00000348161 DOT1LQ8TEK3 1739 aa20.14■□□□□ 0.82
TOM1L1-201ENST00000348161 ASAP1Q9ULH1 1129 aa20.14■□□□□ 0.81
TOM1L1-201ENST00000348161 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
TOM1L1-201ENST00000348161 HMGB2P26583 209 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms