RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
TRAF3-201ENST00000347662 PLB1Q6P1J6 1458 aa13.9□□□□□ -0.18
TRAF3-201ENST00000347662 INTS3Q68E01 1043 aaKnown RBP13.9□□□□□ -0.19
TRAF3-201ENST00000347662 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.19
TRAF3-201ENST00000347662 SURF6O75683 361 aaKnown RBP13.89□□□□□ -0.19
TRAF3-201ENST00000347662 NUDT16Q96DE0 195 aaKnown RBP13.89□□□□□ -0.19
TRAF3-201ENST00000347662 CCDC39Q9UFE4 941 aa13.89□□□□□ -0.19
TRAF3-201ENST00000347662 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-201ENST00000347662 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
TRAF3-201ENST00000347662 CFAP57Q96MR6 1250 aa13.89□□□□□ -0.19
TRAF3-201ENST00000347662 PSMA5P28066 241 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
TRAF3-201ENST00000347662 NINLQ9Y2I6 1382 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 TTC39AQ5SRH9 613 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 SIL1Q9H173 461 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 GOPCQ9HD26 462 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 TXLNBQ8N3L3 684 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 TSR2Q969E8 191 aaKnown RBP13.88□□□□□ -0.19
TRAF3-201ENST00000347662 ZBED9Q6R2W3 1325 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 PIP4K2AP48426 406 aaPredicted RBP13.88□□□□□ -0.19
TRAF3-201ENST00000347662 CNTLNQ9NXG0 1405 aa13.88□□□□□ -0.19
TRAF3-201ENST00000347662 FEZ1Q99689 392 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
TRAF3-201ENST00000347662 SSX2IPQ9Y2D8 614 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 EHBP1L1Q8N3D4 1523 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 C1orf115Q9H7X2 142 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 IQGAP2Q13576 1575 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 TTLL12Q14166 644 aaPredicted RBP13.87□□□□□ -0.19
TRAF3-201ENST00000347662 TMCO5BA8MYB1 307 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 USP5P45974 858 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 CTNNBL1Q8WYA6 563 aaPredicted RBP13.87□□□□□ -0.19
TRAF3-201ENST00000347662 BMS1Q14692 1282 aaKnown RBP13.87□□□□□ -0.19
TRAF3-201ENST00000347662 KIAA0586Q9BVV6 1533 aa13.87□□□□□ -0.19
TRAF3-201ENST00000347662 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
TRAF3-201ENST00000347662 PPP2R1AP30153 589 aa13.86□□□□□ -0.19
TRAF3-201ENST00000347662 CCDC175P0C221 793 aa13.86□□□□□ -0.19
TRAF3-201ENST00000347662 NUP133Q8WUM0 1156 aa13.86□□□□□ -0.19
TRAF3-201ENST00000347662 TWISTNBQ3B726 338 aaPredicted RBP13.86□□□□□ -0.19
TRAF3-201ENST00000347662 AMOTL2Q9Y2J4 779 aa13.86□□□□□ -0.19
TRAF3-201ENST00000347662 EFCAB5A4FU69 1503 aa13.86□□□□□ -0.19
TRAF3-201ENST00000347662 KIAA1328Q86T90 577 aa13.86□□□□□ -0.19
TRAF3-201ENST00000347662 WDHD1O75717 1129 aaPredicted RBP13.86□□□□□ -0.19
TRAF3-201ENST00000347662 EXOSC9Q06265 439 aaKnown RBP13.86□□□□□ -0.19
TRAF3-201ENST00000347662 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
TRAF3-201ENST00000347662 NUCB2P80303 420 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 CNTROBQ8N137 903 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 USHBP1Q8N6Y0 703 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 ARL1P40616 181 aaPredicted RBP13.85□□□□□ -0.19
TRAF3-201ENST00000347662 CETN2P41208 172 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 MPHOSPH8Q99549 860 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 ADGRL1O94910 1474 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 ANKRD18BA2A2Z9 1011 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 CCDC69A6NI79 296 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 BTBD11A6QL63 1104 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 GNL3LQ9NVN8 582 aaKnown RBP13.85□□□□□ -0.19
TRAF3-201ENST00000347662 HFM1A2PYH4 1435 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 KIAA1107Q9UPP5 1409 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 STK38Q15208 465 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
TRAF3-201ENST00000347662 FERP16591 822 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 NASPP49321 788 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-201ENST00000347662 PPP4R3AQ6IN85 833 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 CCDC102AQ96A19 550 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 GSTTP1A0A1W2PQM5 241 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 RBM25P49756 843 aaKnown RBP13.84□□□□□ -0.19
TRAF3-201ENST00000347662 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 MPRIPQ6WCQ1 1025 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 TIGD1Q96MW7 591 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 EPRSP07814 1512 aaKnown RBP13.84□□□□□ -0.19
TRAF3-201ENST00000347662 RBM10P98175 930 aaKnown RBP13.84□□□□□ -0.19
TRAF3-201ENST00000347662 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 BMP2KQ9NSY1 1161 aaPredicted RBP13.84□□□□□ -0.19
TRAF3-201ENST00000347662 TAF4BQ92750 862 aa13.84□□□□□ -0.19
TRAF3-201ENST00000347662 ZNF396Q96N95 335 aaPredicted RBP13.83□□□□□ -0.19
TRAF3-201ENST00000347662 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.19
TRAF3-201ENST00000347662 MACROD2A1Z1Q3 448 aa13.83□□□□□ -0.2
TRAF3-201ENST00000347662 IQCEQ6IPM2 695 aa13.83□□□□□ -0.2
TRAF3-201ENST00000347662 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.2
TRAF3-201ENST00000347662 ZNF608Q9ULD9 1512 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-201ENST00000347662 ERICH4A6NGS2 130 aa13.83□□□□□ -0.2
TRAF3-201ENST00000347662 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
TRAF3-201ENST00000347662 STK3Q13188 491 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 IDI1Q13907 227 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 FERMT2Q96AC1 680 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 ZNF354CQ86Y25 554 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
TRAF3-201ENST00000347662 HOOK3Q86VS8 718 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 UBAP1LF5GYI3 381 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 USP8P40818 1118 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 DAPK1P53355 1430 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 ERLIN1O75477 346 aa13.82□□□□□ -0.2
TRAF3-201ENST00000347662 DACH1Q9UI36 760 aa13.81□□□□□ -0.2
TRAF3-201ENST00000347662 LIG1P18858 919 aa13.81□□□□□ -0.2
TRAF3-201ENST00000347662 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms