RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NSD2O96028 1365 aa22.08■■□□□ 1.12
RAB5C-201ENST00000346213 BCL11BQ9C0K0 894 aaPredicted RBP22.07■■□□□ 1.12
RAB5C-201ENST00000346213 EIF4A2Q14240 407 aaKnown RBP22.07■■□□□ 1.12
RAB5C-201ENST00000346213 DDX54Q8TDD1 881 aaKnown RBP22.06■■□□□ 1.12
RAB5C-201ENST00000346213 EYA1Q99502 592 aa22.06■■□□□ 1.12
RAB5C-201ENST00000346213 RGPD3A6NKT7 1758 aaPredicted RBP22.05■■□□□ 1.12
RAB5C-201ENST00000346213 RGPD4Q7Z3J3 1758 aa22.05■■□□□ 1.12
RAB5C-201ENST00000346213 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
RAB5C-201ENST00000346213 DOT1LQ8TEK3 1739 aa22.04■■□□□ 1.12
RAB5C-201ENST00000346213 R3HDM1Q15032 1099 aaKnown RBP22.04■■□□□ 1.12
RAB5C-201ENST00000346213 KNSTRNQ9Y448 316 aa22.04■■□□□ 1.12
RAB5C-201ENST00000346213 PARD3Q8TEW0 1356 aa22.03■■□□□ 1.12
RAB5C-201ENST00000346213 MORC1Q86VD1 984 aa22.03■■□□□ 1.12
RAB5C-201ENST00000346213 BTAF1O14981 1849 aa22.02■■□□□ 1.12
RAB5C-201ENST00000346213 ZCRB1Q8TBF4 217 aaKnown RBP22.02■■□□□ 1.12
RAB5C-201ENST00000346213 PKD1L3Q7Z443 1732 aa22.02■■□□□ 1.12
RAB5C-201ENST00000346213 TOGARAM1Q9Y4F4 1720 aa22.02■■□□□ 1.11
RAB5C-201ENST00000346213 PLSCR1O15162 318 aa22.01■■□□□ 1.11
RAB5C-201ENST00000346213 DIEXFQ68CQ4 756 aaKnown RBP22.01■■□□□ 1.11
RAB5C-201ENST00000346213 CYP27B1O15528 508 aa22■■□□□ 1.11
RAB5C-201ENST00000346213 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
RAB5C-201ENST00000346213 IGSF1Q8N6C5 1336 aa21.98■■□□□ 1.11
RAB5C-201ENST00000346213 CNGB1Q14028 1251 aaPredicted RBP21.98■■□□□ 1.11
RAB5C-201ENST00000346213 PAPPAQ13219 1627 aa21.97■■□□□ 1.11
RAB5C-201ENST00000346213 AEBP1Q8IUX7 1158 aa21.97■■□□□ 1.11
RAB5C-201ENST00000346213 RAPGEF4Q8WZA2 1011 aa21.97■■□□□ 1.11
RAB5C-201ENST00000346213 TATP17735 454 aaPredicted RBP21.96■■□□□ 1.11
RAB5C-201ENST00000346213 PDGFDQ9GZP0 370 aaPredicted RBP21.96■■□□□ 1.11
RAB5C-201ENST00000346213 PRIM1P49642 420 aaKnown RBP21.95■■□□□ 1.1
RAB5C-201ENST00000346213 TXNRD1Q16881 649 aa21.95■■□□□ 1.1
RAB5C-201ENST00000346213 LRRC4BQ9NT99 713 aa21.95■■□□□ 1.1
RAB5C-201ENST00000346213 COL3A1P02461 1466 aaPredicted RBP21.94■■□□□ 1.1
RAB5C-201ENST00000346213 IL13P35225 146 aa21.93■■□□□ 1.1
RAB5C-201ENST00000346213 KCNQ4P56696 695 aa21.93■■□□□ 1.1
RAB5C-201ENST00000346213 NPC1L1Q9UHC9 1359 aa21.92■■□□□ 1.1
RAB5C-201ENST00000346213 MTHFSP49914 203 aa21.91■■□□□ 1.1
RAB5C-201ENST00000346213 LRP5O75197 1615 aa21.91■■□□□ 1.1
RAB5C-201ENST00000346213 PCDH11XQ9BZA7 1347 aa21.91■■□□□ 1.1
RAB5C-201ENST00000346213 PCDH11YQ9BZA8 1340 aa21.91■■□□□ 1.1
RAB5C-201ENST00000346213 CASZ1Q86V15 1759 aa21.9■■□□□ 1.1
RAB5C-201ENST00000346213 SYTL4Q96C24 671 aaPredicted RBP21.89■■□□□ 1.1
RAB5C-201ENST00000346213 ZNF827Q17R98 1081 aa21.88■■□□□ 1.09
RAB5C-201ENST00000346213 LY75O60449 1722 aa21.87■■□□□ 1.09
RAB5C-201ENST00000346213 KDRP35968 1356 aa21.87■■□□□ 1.09
RAB5C-201ENST00000346213 PHKG2P15735 406 aa21.85■■□□□ 1.09
RAB5C-201ENST00000346213 NKX1-1Q15270 411 aaPredicted RBP21.85■■□□□ 1.09
RAB5C-201ENST00000346213 KDM6AO15550 1401 aaPredicted RBP21.84■■□□□ 1.09
RAB5C-201ENST00000346213 ITGB4P16144 1822 aa21.84■■□□□ 1.09
RAB5C-201ENST00000346213 SULT6B1Q6IMI4 303 aa21.84■■□□□ 1.09
RAB5C-201ENST00000346213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.82■■□□□ 1.08
RAB5C-201ENST00000346213 SLC15A2Q16348 729 aa21.81■■□□□ 1.08
RAB5C-201ENST00000346213 NBPF14Q5TI25 921 aa21.81■■□□□ 1.08
RAB5C-201ENST00000346213 PIGBQ92521 554 aa21.81■■□□□ 1.08
RAB5C-201ENST00000346213 SPG7Q9UQ90 795 aa21.81■■□□□ 1.08
RAB5C-201ENST00000346213 TUBGCP6Q96RT7 1819 aa21.8■■□□□ 1.08
RAB5C-201ENST00000346213 HMOX1P09601 288 aa21.8■■□□□ 1.08
RAB5C-201ENST00000346213 MPRIPQ6WCQ1 1025 aa21.8■■□□□ 1.08
RAB5C-201ENST00000346213 AKT1S1Q96B36 256 aa21.8■■□□□ 1.08
RAB5C-201ENST00000346213 KAT6BQ8WYB5 2073 aa21.8■■□□□ 1.08
RAB5C-201ENST00000346213 PLEKHG2Q9H7P9 1386 aa21.78■■□□□ 1.08
RAB5C-201ENST00000346213 IFNL2Q8IZJ0 200 aa21.77■■□□□ 1.08
RAB5C-201ENST00000346213 PALLDQ8WX93 1383 aa21.77■■□□□ 1.08
RAB5C-201ENST00000346213 PPP2R1AP30153 589 aa21.76■■□□□ 1.07
RAB5C-201ENST00000346213 AMIGO3Q86WK7 504 aa21.76■■□□□ 1.07
RAB5C-201ENST00000346213 ZNF530Q6P9A1 599 aaPredicted RBP21.75■■□□□ 1.07
RAB5C-201ENST00000346213 DIAPH1O60610 1272 aaKnown RBP21.75■■□□□ 1.07
RAB5C-201ENST00000346213 ZBTB7AO95365 584 aa21.75■■□□□ 1.07
RAB5C-201ENST00000346213 STK32BQ9NY57 414 aa21.75■■□□□ 1.07
RAB5C-201ENST00000346213 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
RAB5C-201ENST00000346213 SMIM5Q71RC9 77 aa21.74■■□□□ 1.07
RAB5C-201ENST00000346213 PNPLA7Q6ZV29 1317 aa21.73■■□□□ 1.07
RAB5C-201ENST00000346213 SLC27A3Q5K4L6 730 aa21.73■■□□□ 1.07
RAB5C-201ENST00000346213 CCNL1Q9UK58 526 aaPredicted RBP21.73■■□□□ 1.07
RAB5C-201ENST00000346213 PTGER2P43116 358 aa21.72■■□□□ 1.07
RAB5C-201ENST00000346213 PLEKHO1Q53GL0 409 aaPredicted RBP21.72■■□□□ 1.07
RAB5C-201ENST00000346213 SLC4A9Q96Q91 983 aa21.72■■□□□ 1.07
RAB5C-201ENST00000346213 C5P01031 1676 aa21.72■■□□□ 1.07
RAB5C-201ENST00000346213 ATG3Q9NT62 314 aa21.71■■□□□ 1.07
RAB5C-201ENST00000346213 TAF1LQ8IZX4 1826 aa21.71■■□□□ 1.07
RAB5C-201ENST00000346213 MTHFSDQ2M296 383 aaKnown RBP21.7■■□□□ 1.06
RAB5C-201ENST00000346213 SGIP1Q9BQI5 828 aa21.7■■□□□ 1.06
RAB5C-201ENST00000346213 ITPK1Q13572 414 aa21.69■■□□□ 1.06
RAB5C-201ENST00000346213 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
RAB5C-201ENST00000346213 QSER1Q2KHR3 1735 aa21.69■■□□□ 1.06
RAB5C-201ENST00000346213 ADAMTS7Q9UKP4 1686 aa21.69■■□□□ 1.06
RAB5C-201ENST00000346213 LGR6Q9HBX8 967 aa21.69■■□□□ 1.06
RAB5C-201ENST00000346213 TMOD3Q9NYL9 352 aa21.69■■□□□ 1.06
RAB5C-201ENST00000346213 DDX10Q13206 875 aaKnown RBP21.68■■□□□ 1.06
RAB5C-201ENST00000346213 AMOTQ4VCS5 1084 aa21.68■■□□□ 1.06
RAB5C-201ENST00000346213 DCAF5Q96JK2 942 aa21.68■■□□□ 1.06
RAB5C-201ENST00000346213 C4BP0C0L5 1744 aa21.67■■□□□ 1.06
RAB5C-201ENST00000346213 U2SURPO15042 1029 aaKnown RBP21.67■■□□□ 1.06
RAB5C-201ENST00000346213 LINC00116Q8NCU8 138 aa21.67■■□□□ 1.06
RAB5C-201ENST00000346213 MRC1P22897 1456 aa21.66■■□□□ 1.06
RAB5C-201ENST00000346213 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
RAB5C-201ENST00000346213 PHACTR3Q96KR7 559 aa21.66■■□□□ 1.06
RAB5C-201ENST00000346213 SPON1Q9HCB6 807 aa21.66■■□□□ 1.06
RAB5C-201ENST00000346213 LOC102724428A0A0B4J2F2 783 aa21.65■■□□□ 1.06
RAB5C-201ENST00000346213 SIK1P57059 783 aa21.65■■□□□ 1.06
RAB5C-201ENST00000346213 RSPH6AQ9H0K4 717 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms