RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 NSD2O96028 1365 aa16.37■□□□□ 0.21
CASC4-202ENST00000345795 KIF1BO60333 1816 aa16.36■□□□□ 0.21
CASC4-202ENST00000345795 PRAMEF22A3QJZ6 481 aa16.36■□□□□ 0.21
CASC4-202ENST00000345795 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
CASC4-202ENST00000345795 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
CASC4-202ENST00000345795 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
CASC4-202ENST00000345795 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
CASC4-202ENST00000345795 HOXC9P31274 260 aa16.35■□□□□ 0.21
CASC4-202ENST00000345795 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
CASC4-202ENST00000345795 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
CASC4-202ENST00000345795 CDC45O75419 566 aa16.35■□□□□ 0.21
CASC4-202ENST00000345795 ANKRD24Q8TF21 1146 aa16.35■□□□□ 0.21
CASC4-202ENST00000345795 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
CASC4-202ENST00000345795 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
CASC4-202ENST00000345795 PLEKHO1Q53GL0 409 aaPredicted RBP16.34■□□□□ 0.21
CASC4-202ENST00000345795 CHAMP1Q96JM3 812 aa16.34■□□□□ 0.21
CASC4-202ENST00000345795 SRCIN1Q9C0H9 1055 aa16.34■□□□□ 0.21
CASC4-202ENST00000345795 NPHP1O15259 732 aa16.34■□□□□ 0.21
CASC4-202ENST00000345795 CWC27Q6UX04 472 aaKnown RBP16.34■□□□□ 0.21
CASC4-202ENST00000345795 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
CASC4-202ENST00000345795 ABCA9Q8IUA7 1624 aa16.33■□□□□ 0.21
CASC4-202ENST00000345795 MYOM2P54296 1465 aa16.33■□□□□ 0.21
CASC4-202ENST00000345795 GCP02774 474 aa16.33■□□□□ 0.21
CASC4-202ENST00000345795 MCTP1Q6DN14 999 aa16.33■□□□□ 0.21
CASC4-202ENST00000345795 ANP32BQ92688 251 aaKnown RBP16.33■□□□□ 0.2
CASC4-202ENST00000345795 SBNO2Q9Y2G9 1366 aa16.33■□□□□ 0.2
CASC4-202ENST00000345795 IFIT2P09913 472 aaKnown RBP16.33■□□□□ 0.2
CASC4-202ENST00000345795 DDX49Q9Y6V7 483 aaKnown RBP16.33■□□□□ 0.2
CASC4-202ENST00000345795 GCC1Q96CN9 775 aa16.32■□□□□ 0.2
CASC4-202ENST00000345795 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
CASC4-202ENST00000345795 NUCB1Q02818 461 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 TRIM44Q96DX7 344 aaPredicted RBP16.31■□□□□ 0.2
CASC4-202ENST00000345795 ARID3AQ99856 593 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 CT47B1P0C2W7 299 aaPredicted RBP16.31■□□□□ 0.2
CASC4-202ENST00000345795 PIP4K2BP78356 416 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
CASC4-202ENST00000345795 LRRCC1Q9C099 1032 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 TAF7LQ5H9L4 462 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 STK11IPQ8N1F8 1099 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 NFATC2IPQ8NCF5 419 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 IL17REQ8NFR9 667 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
CASC4-202ENST00000345795 TULP4Q9NRJ4 1543 aa16.3■□□□□ 0.2
CASC4-202ENST00000345795 PNMA6EA0A0J9YXQ4 647 aa16.3■□□□□ 0.2
CASC4-202ENST00000345795 INTS3Q68E01 1043 aaKnown RBP16.3■□□□□ 0.2
CASC4-202ENST00000345795 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
CASC4-202ENST00000345795 NDUFB9Q9Y6M9 179 aa16.3■□□□□ 0.2
CASC4-202ENST00000345795 ADAMTS2O95450 1211 aa16.3■□□□□ 0.2
CASC4-202ENST00000345795 MSH6P52701 1360 aa16.3■□□□□ 0.2
CASC4-202ENST00000345795 MCCP23508 829 aa16.3■□□□□ 0.2
CASC4-202ENST00000345795 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
CASC4-202ENST00000345795 SDSP20132 328 aa16.29■□□□□ 0.2
CASC4-202ENST00000345795 NEXNQ0ZGT2 675 aa16.29■□□□□ 0.2
CASC4-202ENST00000345795 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
CASC4-202ENST00000345795 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
CASC4-202ENST00000345795 SIRT2Q8IXJ6 389 aa16.29■□□□□ 0.2
CASC4-202ENST00000345795 CHMP4CQ96CF2 233 aa16.29■□□□□ 0.2
CASC4-202ENST00000345795 CHMP5Q9NZZ3 219 aa16.29■□□□□ 0.2
CASC4-202ENST00000345795 GLI2P10070 1586 aa16.28■□□□□ 0.2
CASC4-202ENST00000345795 ST18O60284 1047 aa16.28■□□□□ 0.2
CASC4-202ENST00000345795 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
CASC4-202ENST00000345795 MAP3K2Q9Y2U5 619 aa16.28■□□□□ 0.2
CASC4-202ENST00000345795 A2ML1A8K2U0 1454 aa16.28■□□□□ 0.2
CASC4-202ENST00000345795 GNAI3P08754 354 aa16.28■□□□□ 0.2
CASC4-202ENST00000345795 INO80Q9ULG1 1556 aaPredicted RBP16.28■□□□□ 0.2
CASC4-202ENST00000345795 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
CASC4-202ENST00000345795 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.2
CASC4-202ENST00000345795 NBPF7P0C2Y1 421 aaPredicted RBP16.27■□□□□ 0.2
CASC4-202ENST00000345795 TATP17735 454 aaPredicted RBP16.27■□□□□ 0.2
CASC4-202ENST00000345795 CABP4P57796 275 aa16.27■□□□□ 0.2
CASC4-202ENST00000345795 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
CASC4-202ENST00000345795 CEP85Q6P2H3 762 aa16.27■□□□□ 0.2
CASC4-202ENST00000345795 TBX22Q9Y458 520 aa16.27■□□□□ 0.2
CASC4-202ENST00000345795 GDPD2Q9HCC8 539 aa16.27■□□□□ 0.2
CASC4-202ENST00000345795 NINLQ9Y2I6 1382 aa16.27■□□□□ 0.19
CASC4-202ENST00000345795 GBP4Q96PP9 640 aa16.27■□□□□ 0.19
CASC4-202ENST00000345795 MYD88Q99836 296 aa16.27■□□□□ 0.19
CASC4-202ENST00000345795 BOLA2Q9H3K6 86 aa16.27■□□□□ 0.19
CASC4-202ENST00000345795 EDC4Q6P2E9 1401 aaKnown RBP16.26■□□□□ 0.19
CASC4-202ENST00000345795 TRAK2O60296 914 aa16.26■□□□□ 0.19
CASC4-202ENST00000345795 CCT4P50991 539 aaKnown RBP16.26■□□□□ 0.19
CASC4-202ENST00000345795 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
CASC4-202ENST00000345795 STK3Q13188 491 aa16.26■□□□□ 0.19
CASC4-202ENST00000345795 AACSQ86V21 672 aa16.26■□□□□ 0.19
CASC4-202ENST00000345795 SMC5Q8IY18 1101 aa16.26■□□□□ 0.19
CASC4-202ENST00000345795 SSFA2P28290 1259 aa16.26■□□□□ 0.19
CASC4-202ENST00000345795 CHL1O00533 1208 aa16.25■□□□□ 0.19
CASC4-202ENST00000345795 CPA1P15085 419 aa16.25■□□□□ 0.19
CASC4-202ENST00000345795 MROH2AA6NES4 1674 aa16.25■□□□□ 0.19
CASC4-202ENST00000345795 USP19O94966 1318 aa16.25■□□□□ 0.19
CASC4-202ENST00000345795 ADGRB3O60242 1522 aa16.25■□□□□ 0.19
CASC4-202ENST00000345795 IL16Q14005 1332 aa16.25■□□□□ 0.19
CASC4-202ENST00000345795 REC8O95072 547 aa16.25■□□□□ 0.19
CASC4-202ENST00000345795 FLT4P35916 1363 aa16.24■□□□□ 0.19
CASC4-202ENST00000345795 HSP90B1P14625 803 aaKnown RBP16.24■□□□□ 0.19
CASC4-202ENST00000345795 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
CASC4-202ENST00000345795 FRMPD1Q5SYB0 1578 aa16.24■□□□□ 0.19
CASC4-202ENST00000345795 MX1P20591 662 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms