RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 DNAI2Q9GZS0 605 aa11.78□□□□□ -0.52
RNF41-201ENST00000345093 PIK3C2GO75747 1445 aa11.78□□□□□ -0.52
RNF41-201ENST00000345093 PTPRKQ15262 1439 aa11.78□□□□□ -0.52
RNF41-201ENST00000345093 SPTY2D1Q68D10 685 aaPredicted RBP11.78□□□□□ -0.52
RNF41-201ENST00000345093 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
RNF41-201ENST00000345093 ADGRF5Q8IZF2 1346 aa11.78□□□□□ -0.52
RNF41-201ENST00000345093 PCDH11XQ9BZA7 1347 aa11.78□□□□□ -0.52
RNF41-201ENST00000345093 PCDH11YQ9BZA8 1340 aa11.78□□□□□ -0.52
RNF41-201ENST00000345093 NKTRP30414 1462 aaKnown RBP11.78□□□□□ -0.52
RNF41-201ENST00000345093 IFT57Q9NWB7 429 aa11.77□□□□□ -0.52
RNF41-201ENST00000345093 CHMP5Q9NZZ3 219 aa11.77□□□□□ -0.52
RNF41-201ENST00000345093 SENP3-EIF4A1A0A087X0R7 540 aa11.77□□□□□ -0.53
RNF41-201ENST00000345093 TRPC5Q9UL62 973 aaPredicted RBP11.77□□□□□ -0.53
RNF41-201ENST00000345093 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.53
RNF41-201ENST00000345093 MAGI3Q5TCQ9 1506 aa11.77□□□□□ -0.53
RNF41-201ENST00000345093 ANKRD20A12PQ8NF67 263 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 BICDL1Q6ZP65 573 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 TMEM2Q9UHN6 1383 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 MAST1Q9Y2H9 1570 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 SLC5A1P13866 664 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 RRS1Q15050 365 aaKnown RBP11.76□□□□□ -0.53
RNF41-201ENST00000345093 PAXIP1Q6ZW49 1069 aaPredicted RBP11.76□□□□□ -0.53
RNF41-201ENST00000345093 ANO2Q9NQ90 1003 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 CTNNA3Q9UI47 895 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 EYA3Q99504 573 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 BACH2Q9BYV9 841 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
RNF41-201ENST00000345093 SNRPA1P09661 255 aaKnown RBP11.76□□□□□ -0.53
RNF41-201ENST00000345093 LMOD1P29536 600 aaPredicted RBP11.76□□□□□ -0.53
RNF41-201ENST00000345093 TRAF1Q13077 416 aa11.76□□□□□ -0.53
RNF41-201ENST00000345093 PIK3R4Q99570 1358 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 ABCA8O94911 1581 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 GSTO1P78417 241 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 TTLL12Q14166 644 aaPredicted RBP11.75□□□□□ -0.53
RNF41-201ENST00000345093 ZGPATQ8N5A5 531 aaKnown RBP11.75□□□□□ -0.53
RNF41-201ENST00000345093 FSD1Q9BTV5 496 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 SLAIN2Q9P270 581 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
RNF41-201ENST00000345093 GCC1Q96CN9 775 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 MYO5CQ9NQX4 1742 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
RNF41-201ENST00000345093 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
RNF41-201ENST00000345093 USP21Q9UK80 565 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 KDM5DQ9BY66 1539 aa11.75□□□□□ -0.53
RNF41-201ENST00000345093 CHD1O14646 1710 aa11.74□□□□□ -0.53
RNF41-201ENST00000345093 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
RNF41-201ENST00000345093 EHMT1Q9H9B1 1298 aa11.74□□□□□ -0.53
RNF41-201ENST00000345093 MYL6BP14649 208 aa11.74□□□□□ -0.53
RNF41-201ENST00000345093 IL27Q8NEV9 243 aa11.74□□□□□ -0.53
RNF41-201ENST00000345093 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
RNF41-201ENST00000345093 MLH3Q9UHC1 1453 aa11.74□□□□□ -0.53
RNF41-201ENST00000345093 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
RNF41-201ENST00000345093 TPD52L1Q16890 204 aaPredicted RBP11.74□□□□□ -0.53
RNF41-201ENST00000345093 HOOK2Q96ED9 719 aa11.74□□□□□ -0.53
RNF41-201ENST00000345093 TPM1P09493 284 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 ARHGEF5Q12774 1597 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 FYB1O15117 783 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 SUPT20HQ8NEM7 779 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
RNF41-201ENST00000345093 TRIM21P19474 475 aaKnown RBP11.73□□□□□ -0.53
RNF41-201ENST00000345093 CCDC152Q4G0S7 254 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 DNAJC2Q99543 621 aaKnown RBP11.73□□□□□ -0.53
RNF41-201ENST00000345093 JDP2Q8WYK2 163 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 FLT4P35916 1363 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 ZFYVE9O95405 1425 aa11.73□□□□□ -0.53
RNF41-201ENST00000345093 IFIT5Q13325 482 aaKnown RBP11.72□□□□□ -0.53
RNF41-201ENST00000345093 NBPF6Q5VWK0 638 aa11.72□□□□□ -0.53
RNF41-201ENST00000345093 NBPF5PQ86XG9 351 aaPredicted RBP11.72□□□□□ -0.53
RNF41-201ENST00000345093 NME9Q86XW9 330 aa11.72□□□□□ -0.53
RNF41-201ENST00000345093 NBPF4Q96M43 638 aa11.72□□□□□ -0.53
RNF41-201ENST00000345093 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
RNF41-201ENST00000345093 MPHOSPH10O00566 681 aaKnown RBP11.72□□□□□ -0.53
RNF41-201ENST00000345093 PDE6BP35913 854 aa11.72□□□□□ -0.53
RNF41-201ENST00000345093 AKAP4Q5JQC9 854 aa11.72□□□□□ -0.53
RNF41-201ENST00000345093 ADAMTS8Q9UP79 889 aa11.72□□□□□ -0.53
RNF41-201ENST00000345093 RXRBP28702 533 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 TNIP1Q15025 636 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 DRC7Q8IY82 874 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.53
RNF41-201ENST00000345093 PLEKHG1Q9ULL1 1385 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 ABCC1P33527 1531 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 RAB11FIP3O75154 756 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 SOGA3Q5TF21 947 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 CRACR2BQ8N4Y2 399 aaPredicted RBP11.71□□□□□ -0.53
RNF41-201ENST00000345093 CCDC87Q9NVE4 849 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 RAI14Q9P0K7 980 aa11.71□□□□□ -0.53
RNF41-201ENST00000345093 ARAP3Q8WWN8 1544 aa11.71□□□□□ -0.54
RNF41-201ENST00000345093 PTCD1O75127 700 aaKnown RBP11.71□□□□□ -0.54
RNF41-201ENST00000345093 METTL24Q5JXM2 366 aa11.71□□□□□ -0.54
RNF41-201ENST00000345093 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
RNF41-201ENST00000345093 YTHDC2Q9H6S0 1430 aaKnown RBP11.7□□□□□ -0.54
RNF41-201ENST00000345093 NUCB2P80303 420 aa11.7□□□□□ -0.54
RNF41-201ENST00000345093 DNTTIP2Q5QJE6 756 aaKnown RBP11.7□□□□□ -0.54
RNF41-201ENST00000345093 TPTE2Q6XPS3 522 aa11.7□□□□□ -0.54
RNF41-201ENST00000345093 DCAF5Q96JK2 942 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms