RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 PPP6R1Q9UPN7 881 aa15.93■□□□□ 0.14
TRIO-202ENST00000344204 DHX16O60231 1041 aaKnown RBP15.93■□□□□ 0.14
TRIO-202ENST00000344204 HIP1O00291 1037 aa15.93■□□□□ 0.14
TRIO-202ENST00000344204 CTAGE5O15320 804 aa15.93■□□□□ 0.14
TRIO-202ENST00000344204 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
TRIO-202ENST00000344204 CEP57Q86XR8 500 aa15.93■□□□□ 0.14
TRIO-202ENST00000344204 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
TRIO-202ENST00000344204 ZSCAN31Q96LW9 406 aaPredicted RBP15.93■□□□□ 0.14
TRIO-202ENST00000344204 PPP2R1AP30153 589 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 UBE2HP62256 183 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 SCAND2PQ9GZW5 306 aaPredicted RBP15.92■□□□□ 0.14
TRIO-202ENST00000344204 TRDNQ13061 729 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 NAA25Q14CX7 972 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 NFXL1Q6ZNB6 911 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 ANO10Q9NW15 660 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 MSL1Q68DK7 614 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 PRIM1P49642 420 aaKnown RBP15.92■□□□□ 0.14
TRIO-202ENST00000344204 MCM6Q14566 821 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 ZNF622Q969S3 477 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRIO-202ENST00000344204 NCOA1Q15788 1441 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 CCDC175P0C221 793 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 C1orf115Q9H7X2 142 aa15.92■□□□□ 0.14
TRIO-202ENST00000344204 MARCH6O60337 910 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 TUBB4AP04350 444 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 GNAI1P63096 354 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 CCDC9Q9Y3X0 531 aaKnown RBP15.91■□□□□ 0.14
TRIO-202ENST00000344204 RAB3GAP1Q15042 981 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 U2AF2P26368 475 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■■□ 22
TRIO-202ENST00000344204 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
TRIO-202ENST00000344204 STK26Q9P289 416 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 TMX1Q9H3N1 280 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 C8orf34Q49A92 452 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 CCDC83Q8IWF9 413 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 WDR66Q8TBY9 1149 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 TTC12Q9H892 705 aaPredicted RBP15.91■□□□□ 0.14
TRIO-202ENST00000344204 RAI14Q9P0K7 980 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 MRVI1Q9Y6F6 885 aa15.91■□□□□ 0.14
TRIO-202ENST00000344204 TOP1P11387 765 aaKnown RBP15.9■□□□□ 0.14
TRIO-202ENST00000344204 C9orf78Q9NZ63 289 aaPredicted RBP15.9■□□□□ 0.14
TRIO-202ENST00000344204 CEP112Q8N8E3 955 aa15.9■□□□□ 0.14
TRIO-202ENST00000344204 SEPT7Q16181 437 aaKnown RBP15.9■□□□□ 0.14
TRIO-202ENST00000344204 KIF4BQ2VIQ3 1234 aa15.9■□□□□ 0.14
TRIO-202ENST00000344204 HFM1A2PYH4 1435 aa15.89■□□□□ 0.13
TRIO-202ENST00000344204 CLNS1AP54105 237 aaKnown RBP15.89■□□□□ 0.13
TRIO-202ENST00000344204 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
TRIO-202ENST00000344204 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRIO-202ENST00000344204 SCLT1Q96NL6 688 aa15.89■□□□□ 0.13
TRIO-202ENST00000344204 MAP2K1Q02750 393 aaPredicted RBP15.89■□□□□ 0.13
TRIO-202ENST00000344204 WDR63Q8IWG1 891 aa15.89■□□□□ 0.13
TRIO-202ENST00000344204 STIM1Q13586 685 aa15.89■□□□□ 0.13
TRIO-202ENST00000344204 IMMTQ16891 758 aaKnown RBP15.89■□□□□ 0.13
TRIO-202ENST00000344204 GOLGA1Q92805 767 aa15.89■□□□□ 0.13
TRIO-202ENST00000344204 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.89■□□□□ 0.131e-8■□□□□ 11
TRIO-202ENST00000344204 SPATA24Q86W54 205 aa15.89■□□□□ 0.13
TRIO-202ENST00000344204 VPS18Q9P253 973 aa15.89■□□□□ 0.13
TRIO-202ENST00000344204 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
TRIO-202ENST00000344204 G3BP1Q13283 466 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRIO-202ENST00000344204 ERC1Q8IUD2 1116 aa15.88■□□□□ 0.13
TRIO-202ENST00000344204 OTUD6BQ8N6M0 293 aa15.88■□□□□ 0.13
TRIO-202ENST00000344204 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
TRIO-202ENST00000344204 SETD1BQ9UPS6 1966 aaKnown RBP15.88■□□□□ 0.13
TRIO-202ENST00000344204 ATF7IPQ6VMQ6 1270 aa15.88■□□□□ 0.13
TRIO-202ENST00000344204 CCDC121Q6ZUS5 278 aa15.88■□□□□ 0.13
TRIO-202ENST00000344204 RALYLQ86SE5 291 aaKnown RBP15.88■□□□□ 0.13
TRIO-202ENST00000344204 PTPN23Q9H3S7 1636 aa15.88■□□□□ 0.13
TRIO-202ENST00000344204 SKILP12757 684 aa15.88■□□□□ 0.13
TRIO-202ENST00000344204 SNX21Q969T3 373 aa15.87■□□□□ 0.13
TRIO-202ENST00000344204 SPECC1LQ69YQ0 1117 aa15.87■□□□□ 0.13
TRIO-202ENST00000344204 TMC6Q7Z403 805 aa15.87■□□□□ 0.13
TRIO-202ENST00000344204 DDX19AQ9NUU7 478 aaKnown RBP15.87■□□□□ 0.13
TRIO-202ENST00000344204 SRCIN1Q9C0H9 1055 aa15.87■□□□□ 0.13
TRIO-202ENST00000344204 FMNL3Q8IVF7 1028 aa15.87■□□□□ 0.13
TRIO-202ENST00000344204 SH2B1Q9NRF2 756 aaPredicted RBP15.87■□□□□ 0.13
TRIO-202ENST00000344204 TUBB4BP68371 445 aa15.87■□□□□ 0.13
TRIO-202ENST00000344204 CKAP2LQ8IYA6 745 aa15.87■□□□□ 0.13
TRIO-202ENST00000344204 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
TRIO-202ENST00000344204 SLFN5Q08AF3 891 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 EVC2Q86UK5 1308 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 POTEDQ86YR6 584 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 BRMS1Q9HCU9 246 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 MKRN1Q9UHC7 482 aaKnown RBP15.86■□□□□ 0.13
TRIO-202ENST00000344204 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 ANKS4BQ8N8V4 417 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 ERO1AQ96HE7 468 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 B4GALNT4Q76KP1 1039 aa15.86■□□□□ 0.13
TRIO-202ENST00000344204 RIOK3O14730 519 aaKnown RBP15.85■□□□□ 0.13
TRIO-202ENST00000344204 TXLNAP40222 546 aa15.85■□□□□ 0.13
TRIO-202ENST00000344204 PLPPR3Q6T4P5 718 aa15.85■□□□□ 0.13
TRIO-202ENST00000344204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.138e-7■■■□□ 16
TRIO-202ENST00000344204 SWAP70Q9UH65 585 aa15.85■□□□□ 0.13
TRIO-202ENST00000344204 GOLGA4Q13439 2230 aaKnown RBP15.85■□□□□ 0.13
TRIO-202ENST00000344204 EHBP1L1Q8N3D4 1523 aa15.85■□□□□ 0.13
TRIO-202ENST00000344204 ZNF165P49910 485 aa15.85■□□□□ 0.13
TRIO-202ENST00000344204 NBPF8Q3BBV2 869 aa15.85■□□□□ 0.13
TRIO-202ENST00000344204 HDXQ7Z353 690 aa15.85■□□□□ 0.13
TRIO-202ENST00000344204 CASTP20810 708 aaKnown RBP15.85■□□□□ 0.13
TRIO-202ENST00000344204 PIBF1Q8WXW3 757 aa15.85■□□□□ 0.13
TRIO-202ENST00000344204 NEBLO76041 1014 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms