RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 KIF20BQ96Q89 1820 aa12.24□□□□□ -0.45
UBE2D3-203ENST00000343106 MSH6P52701 1360 aa12.24□□□□□ -0.45
UBE2D3-203ENST00000343106 TSHZ3Q63HK5 1081 aa12.24□□□□□ -0.45
UBE2D3-203ENST00000343106 RPAP2Q8IXW5 612 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-203ENST00000343106 NGDNQ8NEJ9 315 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-203ENST00000343106 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
UBE2D3-203ENST00000343106 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-203ENST00000343106 TSPOAP1O95153 1857 aa12.23□□□□□ -0.45
UBE2D3-203ENST00000343106 AMPHP49418 695 aa12.23□□□□□ -0.45
UBE2D3-203ENST00000343106 USP26Q9BXU7 913 aa12.23□□□□□ -0.45
UBE2D3-203ENST00000343106 NCOA3Q9Y6Q9 1424 aa12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 SIRT1Q96EB6 747 aa12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 GRPEL1Q9HAV7 217 aa12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 TNRQ92752 1358 aa12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 MRE11P49959 708 aa12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 HAP1P54257 671 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 GAS2L3Q86XJ1 694 aa12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 LTV1Q96GA3 475 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 SPATA31D1Q6ZQQ2 1576 aa12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 RTL1A6NKG5 1358 aa12.22□□□□□ -0.45
UBE2D3-203ENST00000343106 EXOC6BQ9Y2D4 811 aa12.21□□□□□ -0.45
UBE2D3-203ENST00000343106 TMEM2Q9UHN6 1383 aa12.21□□□□□ -0.45
UBE2D3-203ENST00000343106 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.46
UBE2D3-203ENST00000343106 AMOTL2Q9Y2J4 779 aa12.21□□□□□ -0.46
UBE2D3-203ENST00000343106 NCLP19338 710 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 CASC1Q6TDU7 716 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 EYA1Q99502 592 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 PTPRCP08575 1304 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 RIMBP3CA6NJZ7 1639 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 RIMBP3BA6NNM3 1639 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 RIMBP3Q9UFD9 1639 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 PKP1Q13835 747 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 RABEP1Q15276 862 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 RGS12O14924 1447 aa12.2□□□□□ -0.46
UBE2D3-203ENST00000343106 NLRP6P59044 892 aa12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 FOXD4L5Q5VV16 416 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 FOXD4L4Q8WXT5 416 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 KIF24Q5T7B8 1368 aa12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 ATP10DQ9P241 1426 aa12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 FKBP5Q13451 457 aaPredicted RBP12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 AGLP35573 1532 aa12.19□□□□□ -0.46
UBE2D3-203ENST00000343106 HMMRO75330 724 aa12.18□□□□□ -0.46
UBE2D3-203ENST00000343106 BAG4O95429 457 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-203ENST00000343106 ZGPATQ8N5A5 531 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-203ENST00000343106 STK31Q9BXU1 1019 aa12.18□□□□□ -0.46
UBE2D3-203ENST00000343106 GOLGA6L22H0YM25 854 aa12.18□□□□□ -0.46
UBE2D3-203ENST00000343106 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
UBE2D3-203ENST00000343106 NRXN3Q9Y4C0 1643 aa12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 USP6P35125 1406 aa12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 CRB1P82279 1406 aa12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 KIAA0232Q92628 1395 aa12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 GNAI2P04899 355 aa12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 PDE1AP54750 535 aa12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 SKOR2Q2VWA4 1001 aaPredicted RBP12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 CHAMP1Q96JM3 812 aa12.17□□□□□ -0.46
UBE2D3-203ENST00000343106 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 RILPL2Q969X0 211 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 DIP2BQ9P265 1576 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 TECPR2O15040 1411 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 ADAMTS13Q76LX8 1427 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 PNMA6EA0A0J9YXQ4 647 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 CCT4P50991 539 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 OVOS2A0A0J9YW53 1432 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 OVOS2Q6IE36 1432 aa12.16□□□□□ -0.46
UBE2D3-203ENST00000343106 ERC2O15083 957 aa12.15□□□□□ -0.46
UBE2D3-203ENST00000343106 ST18O60284 1047 aa12.15□□□□□ -0.46
UBE2D3-203ENST00000343106 FLIIQ13045 1269 aa12.15□□□□□ -0.46
UBE2D3-203ENST00000343106 REC8O95072 547 aa12.15□□□□□ -0.46
UBE2D3-203ENST00000343106 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-203ENST00000343106 SETD1AO15047 1707 aaKnown RBP12.15□□□□□ -0.47
UBE2D3-203ENST00000343106 NEK4P51957 841 aa12.14□□□□□ -0.47
UBE2D3-203ENST00000343106 KNDC1Q76NI1 1749 aa12.14□□□□□ -0.47
UBE2D3-203ENST00000343106 PTPRUQ92729 1446 aa12.14□□□□□ -0.47
UBE2D3-203ENST00000343106 TRIM44Q96DX7 344 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-203ENST00000343106 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
UBE2D3-203ENST00000343106 GNAT3A8MTJ3 354 aa12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 CAVIN1Q6NZI2 390 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 ABTB2Q8N961 1025 aa12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 IL17REQ8NFR9 667 aa12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 IL1RAPL2Q9NP60 686 aa12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 LRRFIP2Q9Y608 721 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 PRPF40AO75400 957 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 MAP4K4O95819 1239 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 NAP1L5Q96NT1 182 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 FLT4P35916 1363 aa12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 USP31Q70CQ4 1352 aa12.13□□□□□ -0.47
UBE2D3-203ENST00000343106 NUCB2P80303 420 aa12.12□□□□□ -0.47
UBE2D3-203ENST00000343106 PHAXQ9H814 394 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-203ENST00000343106 ANO2Q9NQ90 1003 aa12.12□□□□□ -0.47
UBE2D3-203ENST00000343106 ARHGEF10O15013 1369 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms