RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 TTLL5Q6EMB2 1281 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 AEBP1Q8IUX7 1158 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 SCAF11Q99590 1463 aaKnown RBP9.58□□□□□ -0.88
UBE4B-202ENST00000343090 TTC39AQ5SRH9 613 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 OLFM4Q6UX06 510 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 IPO7O95373 1038 aaKnown RBP9.58□□□□□ -0.88
UBE4B-202ENST00000343090 IDI1Q13907 227 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 GPATCH8Q9UKJ3 1502 aaKnown RBP9.58□□□□□ -0.88
UBE4B-202ENST00000343090 GNAT3A8MTJ3 354 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 CABP4P57796 275 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 STK38Q15208 465 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 ALDH1L2Q3SY69 923 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
UBE4B-202ENST00000343090 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
UBE4B-202ENST00000343090 PEG3Q9GZU2 1588 aa9.58□□□□□ -0.88
UBE4B-202ENST00000343090 FAM135AQ9P2D6 1515 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 MX1P20591 662 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 CASTP20810 708 aaKnown RBP9.57□□□□□ -0.88
UBE4B-202ENST00000343090 TNMDQ9H2S6 317 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 FERMT3Q86UX7 667 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 TNNQ9UQP3 1299 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 FKBP4Q02790 459 aaKnown RBP eCLIP9.57□□□□□ -0.88
UBE4B-202ENST00000343090 SAMD1Q6SPF0 538 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-202ENST00000343090 TBC1D32Q96NH3 1257 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 CNNM1Q9NRU3 951 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 TBC1D2BQ9UPU7 963 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
UBE4B-202ENST00000343090 TSHZ3Q63HK5 1081 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 BLOC1S2Q6QNY1 142 aa9.57□□□□□ -0.88
UBE4B-202ENST00000343090 THEMISQ8N1K5 641 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC94Q9BW85 323 aaPredicted RBP9.57□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC192P0DO97 292 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 ME1P48163 572 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 NOM1Q5C9Z4 860 aaKnown RBP9.56□□□□□ -0.88
UBE4B-202ENST00000343090 RBM33Q96EV2 1170 aaKnown RBP9.56□□□□□ -0.88
UBE4B-202ENST00000343090 CEP89Q96ST8 783 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 SPINK5Q9NQ38 1064 aaPredicted RBP9.56□□□□□ -0.88
UBE4B-202ENST00000343090 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 KIF6Q6ZMV9 814 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC47Q96A33 483 aaKnown RBP9.56□□□□□ -0.88
UBE4B-202ENST00000343090 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 KRT85P78386 507 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC158Q5M9N0 1113 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 DDX11Q96FC9 970 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC83Q8IWF9 413 aa9.56□□□□□ -0.88
UBE4B-202ENST00000343090 SETQ01105 290 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-202ENST00000343090 BRPF1P55201 1214 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-202ENST00000343090 CAMK4Q16566 473 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 TBC1D9Q6ZT07 1266 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 ZNF396Q96N95 335 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-202ENST00000343090 TRIM34Q9BYJ4 488 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 PRPF40BQ6NWY9 871 aaKnown RBP9.55□□□□□ -0.88
UBE4B-202ENST00000343090 SPATA32Q96LK8 384 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 ARGLU1Q9NWB6 273 aaPredicted RBP9.55□□□□□ -0.88
UBE4B-202ENST00000343090 LRRFIP2Q9Y608 721 aaKnown RBP9.55□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC70Q6NSX1 233 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 TOM1L2Q6ZVM7 507 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 TRERF1Q96PN7 1200 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 ABCC11Q96J66 1382 aa9.55□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC112Q8NEF3 446 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 PRM3Q9NNZ6 103 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 CWC15Q9P013 229 aaKnown RBP9.54□□□□□ -0.88
UBE4B-202ENST00000343090 CD109Q6YHK3 1445 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 MCM5P33992 734 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 GTPBP4Q9BZE4 634 aaKnown RBP9.54□□□□□ -0.88
UBE4B-202ENST00000343090 NAP1L1P55209 391 aaKnown RBP9.54□□□□□ -0.88
UBE4B-202ENST00000343090 SART3Q15020 963 aaKnown RBP9.54□□□□□ -0.88
UBE4B-202ENST00000343090 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 C14orf93Q9H972 538 aaKnown RBP9.54□□□□□ -0.88
UBE4B-202ENST00000343090 RALGAPBQ86X10 1494 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
UBE4B-202ENST00000343090 BOLA2Q9H3K6 86 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 GDPD2Q9HCC8 539 aa9.54□□□□□ -0.88
UBE4B-202ENST00000343090 BRMS1Q9HCU9 246 aa9.53□□□□□ -0.88
UBE4B-202ENST00000343090 UNC13AQ9UPW8 1703 aa9.53□□□□□ -0.88
UBE4B-202ENST00000343090 RNF123Q5XPI4 1314 aa9.53□□□□□ -0.88
UBE4B-202ENST00000343090 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
UBE4B-202ENST00000343090 WASLO00401 505 aaPredicted RBP9.53□□□□□ -0.88
UBE4B-202ENST00000343090 XBP1P17861 261 aa9.53□□□□□ -0.88
UBE4B-202ENST00000343090 MPRIPQ6WCQ1 1025 aa9.53□□□□□ -0.88
UBE4B-202ENST00000343090 KIF1BPQ96EK5 621 aa9.53□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC8Q9H0W5 538 aaPredicted RBP9.53□□□□□ -0.88
UBE4B-202ENST00000343090 NUP62CLQ9H1M0 184 aa9.53□□□□□ -0.88
UBE4B-202ENST00000343090 SEC24BO95487 1268 aa9.52□□□□□ -0.88
UBE4B-202ENST00000343090 CCDC57Q2TAC2 916 aa9.52□□□□□ -0.88
UBE4B-202ENST00000343090 IGSF3O75054 1194 aa9.52□□□□□ -0.89
UBE4B-202ENST00000343090 PARD3Q8TEW0 1356 aa9.52□□□□□ -0.89
UBE4B-202ENST00000343090 SERPINC1P01008 464 aa9.52□□□□□ -0.89
UBE4B-202ENST00000343090 FAM177A1Q8N128 213 aaPredicted RBP9.52□□□□□ -0.89
UBE4B-202ENST00000343090 NUP133Q8WUM0 1156 aa9.52□□□□□ -0.89
UBE4B-202ENST00000343090 ZSCAN31Q96LW9 406 aaPredicted RBP9.52□□□□□ -0.89
UBE4B-202ENST00000343090 PRAG1Q86YV5 1406 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 KLHL40Q2TBA0 621 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 FILIP1Q7Z7B0 1213 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 PRIMPOLQ96LW4 560 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■■■□ 20.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms