RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 NCBP1Q09161 790 aaKnown RBP9.83□□□□□ -0.84
CAST-204ENST00000341926 AP1ARQ63HQ0 302 aa9.83□□□□□ -0.84
CAST-204ENST00000341926 KIF1BPQ96EK5 621 aa9.83□□□□□ -0.84
CAST-204ENST00000341926 FAXDC2Q96IV6 333 aa9.83□□□□□ -0.84
CAST-204ENST00000341926 WWC2Q6AWC2 1192 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 ZNF280DQ6N043 979 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 MMS22LQ6ZRQ5 1243 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 TRIM74Q86UV6 250 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 TRIM73Q86UV7 250 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 CIZ1Q9ULV3 898 aaPredicted RBP9.82□□□□□ -0.84
CAST-204ENST00000341926 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 TOP2BQ02880 1626 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 FHAD1B1AJZ9 1412 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 GLI2P10070 1586 aa9.82□□□□□ -0.84
CAST-204ENST00000341926 RAD21O60216 631 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 PACS2Q86VP3 889 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 NCOA3Q9Y6Q9 1424 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 RWDD2BP57060 319 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 FMNL3Q8IVF7 1028 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 HELBQ8NG08 1087 aaPredicted RBP9.81□□□□□ -0.84
CAST-204ENST00000341926 SNRNP27Q8WVK2 155 aaKnown RBP9.81□□□□□ -0.84
CAST-204ENST00000341926 STAG1Q8WVM7 1258 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 PRG4Q92954 1404 aaPredicted RBP9.81□□□□□ -0.84
CAST-204ENST00000341926 MMTAG2Q9BU76 263 aaKnown RBP9.81□□□□□ -0.84
CAST-204ENST00000341926 CHCHD3Q9NX63 227 aaKnown RBP9.81□□□□□ -0.84
CAST-204ENST00000341926 SUN2Q9UH99 717 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 SYNPO2Q9UMS6 1093 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 TBC1D2BQ9UPU7 963 aa9.81□□□□□ -0.84
CAST-204ENST00000341926 CPP00450 1065 aa9.8□□□□□ -0.84
CAST-204ENST00000341926 KLHL40Q2TBA0 621 aa9.8□□□□□ -0.84
CAST-204ENST00000341926 DZIP3Q86Y13 1208 aaKnown RBP9.8□□□□□ -0.84
CAST-204ENST00000341926 PCDHGA4Q9Y5G9 962 aa9.8□□□□□ -0.84
CAST-204ENST00000341926 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
CAST-204ENST00000341926 PDCD2Q16342 344 aaPredicted RBP9.8□□□□□ -0.84
CAST-204ENST00000341926 IQUBQ8NA54 791 aa9.8□□□□□ -0.84
CAST-204ENST00000341926 CCDC26Q8TAB7 109 aa9.8□□□□□ -0.84
CAST-204ENST00000341926 ZNF396Q96N95 335 aaPredicted RBP9.8□□□□□ -0.84
CAST-204ENST00000341926 SH3GL3Q99963 347 aa9.8□□□□□ -0.84
CAST-204ENST00000341926 VEZTQ9HBM0 779 aa9.8□□□□□ -0.84
CAST-204ENST00000341926 RUSC2Q8N2Y8 1516 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 TPM1P09493 284 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 DDIT3P35638 169 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
CAST-204ENST00000341926 PPM1EQ8WY54 764 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 SLX1AQ9BQ83 275 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 TMX4Q9H1E5 349 aaPredicted RBP9.79□□□□□ -0.84
CAST-204ENST00000341926 RCAN3Q9UKA8 241 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 RRP15Q9Y3B9 282 aaKnown RBP9.79□□□□□ -0.84
CAST-204ENST00000341926 RRBP1Q9P2E9 1410 aaKnown RBP9.79□□□□□ -0.84
CAST-204ENST00000341926 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 ICA1Q05084 483 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 E2F4Q16254 413 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 TTC19Q6DKK2 380 aaPredicted RBP9.79□□□□□ -0.84
CAST-204ENST00000341926 GPT2Q8TD30 523 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 MIEF2Q96C03 454 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.79□□□□□ -0.84
CAST-204ENST00000341926 LMTK3Q96Q04 1460 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 SYNRGQ9UMZ2 1314 aa9.79□□□□□ -0.84
CAST-204ENST00000341926 ZMYM3Q14202 1370 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 SMC2O95347 1197 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 PAX3P23760 479 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 TEX35Q5T0J7 233 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 GET4Q7L5D6 327 aaPredicted RBP9.78□□□□□ -0.84
CAST-204ENST00000341926 CXorf38Q8TB03 319 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 ZCRB1Q8TBF4 217 aaKnown RBP9.78□□□□□ -0.84
CAST-204ENST00000341926 MTMR7Q9Y216 660 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 SLC5A9Q2M3M2 681 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 CCDC30Q5VVM6 783 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 NAIF1Q69YI7 327 aaPredicted RBP9.78□□□□□ -0.84
CAST-204ENST00000341926 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 ZNF397Q8NF99 534 aaPredicted RBP9.78□□□□□ -0.84
CAST-204ENST00000341926 ARPC5LQ9BPX5 153 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 LZTS2Q9BRK4 669 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 CPSF2Q9P2I0 782 aaKnown RBP9.78□□□□□ -0.84
CAST-204ENST00000341926 LCMT1Q9UIC8 334 aa9.78□□□□□ -0.84
CAST-204ENST00000341926 TPD52L2O43399 206 aaKnown RBP9.77□□□□□ -0.85
CAST-204ENST00000341926 BRD1O95696 1058 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 RASA3Q14644 834 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 KRBA2Q6ZNG9 492 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 NUTM1Q86Y26 1132 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 CCDC191Q8NCU4 936 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 TBC1D32Q96NH3 1257 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 VPS8Q8N3P4 1428 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 SGSM2O43147 1006 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 ZRANB2O95218 330 aaKnown RBP eCLIP9.77□□□□□ -0.85
CAST-204ENST00000341926 CLEC17AQ6ZS10 378 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 KCTD17Q8N5Z5 321 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 FRMD4BQ9Y2L6 1034 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 CLIP1P30622 1438 aa9.77□□□□□ -0.85
CAST-204ENST00000341926 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
CAST-204ENST00000341926 SLFNL1Q499Z3 407 aa9.76□□□□□ -0.85
CAST-204ENST00000341926 HSP90B2PQ58FF3 399 aa9.76□□□□□ -0.85
CAST-204ENST00000341926 SKAP1Q86WV1 359 aa9.76□□□□□ -0.85
CAST-204ENST00000341926 GOLGA5Q8TBA6 731 aa9.76□□□□□ -0.85
CAST-204ENST00000341926 CWC25Q9NXE8 425 aaPredicted RBP9.76□□□□□ -0.85
CAST-204ENST00000341926 UHRF1BP1LA0JNW5 1464 aa9.76□□□□□ -0.85
CAST-204ENST00000341926 ECEL1O95672 775 aa9.76□□□□□ -0.85
CAST-204ENST00000341926 MYBL2P10244 700 aa9.76□□□□□ -0.85
CAST-204ENST00000341926 IMPDH2P12268 514 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms