RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.08□□□□□ -0.31
CAPRIN1-201ENST00000341394 RGPD1P0DJD0 1748 aa13.08□□□□□ -0.32
CAPRIN1-201ENST00000341394 FCHSD2O94868 740 aa13.07□□□□□ -0.32
CAPRIN1-201ENST00000341394 AEBP2Q6ZN18 517 aaPredicted RBP13.07□□□□□ -0.32
CAPRIN1-201ENST00000341394 RGPD2P0DJD1 1756 aa13.07□□□□□ -0.32
CAPRIN1-201ENST00000341394 NGEFQ8N5V2 710 aa13.07□□□□□ -0.32
CAPRIN1-201ENST00000341394 FAM83GA6ND36 823 aa13.06□□□□□ -0.32
CAPRIN1-201ENST00000341394 E9PSI1 815 aa13.06□□□□□ -0.32
CAPRIN1-201ENST00000341394 ZC3H6P61129 1189 aaKnown RBP13.06□□□□□ -0.32
CAPRIN1-201ENST00000341394 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
CAPRIN1-201ENST00000341394 C1orf167Q5SNV9 1468 aa13.06□□□□□ -0.32
CAPRIN1-201ENST00000341394 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-201ENST00000341394 LNPKQ9C0E8 428 aa13.05□□□□□ -0.32
CAPRIN1-201ENST00000341394 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
CAPRIN1-201ENST00000341394 CSB-PGBD3P0DP91 1061 aa13.05□□□□□ -0.32
CAPRIN1-201ENST00000341394 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
CAPRIN1-201ENST00000341394 TNNQ9UQP3 1299 aa13.05□□□□□ -0.32
CAPRIN1-201ENST00000341394 USP54Q70EL1 1684 aa13.05□□□□□ -0.32
CAPRIN1-201ENST00000341394 A0A0G2JS52 829 aa13.04□□□□□ -0.32
CAPRIN1-201ENST00000341394 RWDD1Q9H446 243 aaPredicted RBP13.04□□□□□ -0.32
CAPRIN1-201ENST00000341394 MST1RQ04912 1400 aa13.04□□□□□ -0.32
CAPRIN1-201ENST00000341394 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
CAPRIN1-201ENST00000341394 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
CAPRIN1-201ENST00000341394 FAM13BQ9NYF5 915 aa13.04□□□□□ -0.32
CAPRIN1-201ENST00000341394 ANKRD45Q5TZF3 282 aa13.03□□□□□ -0.32
CAPRIN1-201ENST00000341394 NAP1L2Q9ULW6 460 aaPredicted RBP13.03□□□□□ -0.32
CAPRIN1-201ENST00000341394 NFAT5O94916 1531 aa13.03□□□□□ -0.32
CAPRIN1-201ENST00000341394 RGPD5Q99666 1765 aa13.03□□□□□ -0.32
CAPRIN1-201ENST00000341394 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.32
CAPRIN1-201ENST00000341394 SLC4A10Q6U841 1118 aa13.02□□□□□ -0.32
CAPRIN1-201ENST00000341394 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.32
CAPRIN1-201ENST00000341394 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.32
CAPRIN1-201ENST00000341394 SLAIN2Q9P270 581 aa13.02□□□□□ -0.32
CAPRIN1-201ENST00000341394 RBM10P98175 930 aaKnown RBP13.02□□□□□ -0.33
CAPRIN1-201ENST00000341394 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
CAPRIN1-201ENST00000341394 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
CAPRIN1-201ENST00000341394 GCP02774 474 aa13.01□□□□□ -0.33
CAPRIN1-201ENST00000341394 DDX49Q9Y6V7 483 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-201ENST00000341394 HOXC9P31274 260 aa13.01□□□□□ -0.33
CAPRIN1-201ENST00000341394 EYA1Q99502 592 aa13□□□□□ -0.33
CAPRIN1-201ENST00000341394 SBNO1A3KN83 1393 aa13□□□□□ -0.33
CAPRIN1-201ENST00000341394 LMOD3Q0VAK6 560 aa13□□□□□ -0.33
CAPRIN1-201ENST00000341394 FLT4P35916 1363 aa13□□□□□ -0.33
CAPRIN1-201ENST00000341394 CHMP3Q9Y3E7 222 aa12.99□□□□□ -0.33
CAPRIN1-201ENST00000341394 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
CAPRIN1-201ENST00000341394 NFE2L2Q16236 605 aa12.99□□□□□ -0.33
CAPRIN1-201ENST00000341394 WDR63Q8IWG1 891 aa12.99□□□□□ -0.33
CAPRIN1-201ENST00000341394 C1orf115Q9H7X2 142 aa12.99□□□□□ -0.33
CAPRIN1-201ENST00000341394 CALD1Q05682 793 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-201ENST00000341394 MED1Q15648 1581 aaPredicted RBP12.99□□□□□ -0.33
CAPRIN1-201ENST00000341394 RNF214Q8ND24 703 aa12.98□□□□□ -0.33
CAPRIN1-201ENST00000341394 NECTIN2Q92692 538 aa12.98□□□□□ -0.33
CAPRIN1-201ENST00000341394 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
CAPRIN1-201ENST00000341394 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
CAPRIN1-201ENST00000341394 MS4A1P11836 297 aa12.98□□□□□ -0.33
CAPRIN1-201ENST00000341394 AXIN2Q9Y2T1 843 aa12.98□□□□□ -0.33
CAPRIN1-201ENST00000341394 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
CAPRIN1-201ENST00000341394 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
CAPRIN1-201ENST00000341394 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
CAPRIN1-201ENST00000341394 MCM10Q7L590 875 aa12.97□□□□□ -0.33
CAPRIN1-201ENST00000341394 LRRC59Q96AG4 307 aaKnown RBP12.97□□□□□ -0.33
CAPRIN1-201ENST00000341394 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
CAPRIN1-201ENST00000341394 GBP4Q96PP9 640 aa12.96□□□□□ -0.33
CAPRIN1-201ENST00000341394 RLBP1P12271 317 aa12.96□□□□□ -0.34
CAPRIN1-201ENST00000341394 KCNJ4P48050 445 aa12.96□□□□□ -0.34
CAPRIN1-201ENST00000341394 KRT24Q2M2I5 525 aa12.96□□□□□ -0.34
CAPRIN1-201ENST00000341394 KIF1AQ12756 1690 aa12.95□□□□□ -0.34
CAPRIN1-201ENST00000341394 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
CAPRIN1-201ENST00000341394 BRINP3Q76B58 766 aa12.95□□□□□ -0.34
CAPRIN1-201ENST00000341394 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
CAPRIN1-201ENST00000341394 IGSF1Q8N6C5 1336 aa12.95□□□□□ -0.34
CAPRIN1-201ENST00000341394 MTHFSDQ2M296 383 aaKnown RBP12.95□□□□□ -0.34
CAPRIN1-201ENST00000341394 IP6K1Q92551 441 aa12.95□□□□□ -0.34
CAPRIN1-201ENST00000341394 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
CAPRIN1-201ENST00000341394 NBPF6Q5VWK0 638 aa12.94□□□□□ -0.34
CAPRIN1-201ENST00000341394 NBPF4Q96M43 638 aa12.94□□□□□ -0.34
CAPRIN1-201ENST00000341394 KDRP35968 1356 aa12.94□□□□□ -0.34
CAPRIN1-201ENST00000341394 CCDC9Q9Y3X0 531 aaKnown RBP12.94□□□□□ -0.34
CAPRIN1-201ENST00000341394 SLIT3O75094 1523 aa12.94□□□□□ -0.34
CAPRIN1-201ENST00000341394 DRC7Q8IY82 874 aa12.94□□□□□ -0.34
CAPRIN1-201ENST00000341394 A0A0U1RQG5 324 aaPredicted RBP12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 EVA1CP58658 441 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 MIS18AQ9NYP9 233 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 GNAI1P63096 354 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 GAS2L2Q8NHY3 880 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 ANKRD24Q8TF21 1146 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 PXDNQ92626 1479 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 C22orf23Q9BZE7 217 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 MBIPQ9NS73 344 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 CRYBG1Q9Y4K1 1723 aa12.93□□□□□ -0.34
CAPRIN1-201ENST00000341394 TRAK2O60296 914 aa12.92□□□□□ -0.34
CAPRIN1-201ENST00000341394 DCCP43146 1447 aa12.92□□□□□ -0.34
CAPRIN1-201ENST00000341394 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
CAPRIN1-201ENST00000341394 PHRF1Q9P1Y6 1649 aaKnown RBP12.92□□□□□ -0.34
CAPRIN1-201ENST00000341394 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
CAPRIN1-201ENST00000341394 SSH1Q8WYL5 1049 aa12.91□□□□□ -0.34
CAPRIN1-201ENST00000341394 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
CAPRIN1-201ENST00000341394 STRN4Q9NRL3 753 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms