RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 RAPGEF6Q8TEU7 1601 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 ZSCAN31Q96LW9 406 aaPredicted RBP17.64■□□□□ 0.41
RRP1B-201ENST00000340648 MBIPQ9NS73 344 aa17.64■□□□□ 0.41
RRP1B-201ENST00000340648 NUP160Q12769 1436 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 ANKRD1Q15327 319 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
RRP1B-201ENST00000340648 COL17A1Q9UMD9 1497 aaPredicted RBP17.63■□□□□ 0.41
RRP1B-201ENST00000340648 OLFM4Q6UX06 510 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 NME9Q86XW9 330 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 SMC5Q8IY18 1101 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 IL16Q14005 1332 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
RRP1B-201ENST00000340648 ME1P48163 572 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 AACSQ86V21 672 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
RRP1B-201ENST00000340648 UHRF1BP1Q6BDS2 1440 aa17.63■□□□□ 0.41
RRP1B-201ENST00000340648 STK38Q15208 465 aa17.62■□□□□ 0.41
RRP1B-201ENST00000340648 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
RRP1B-201ENST00000340648 ZNF396Q96N95 335 aaPredicted RBP17.62■□□□□ 0.41
RRP1B-201ENST00000340648 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
RRP1B-201ENST00000340648 FAM83GA6ND36 823 aa17.61■□□□□ 0.41
RRP1B-201ENST00000340648 FBLN1P23142 703 aa17.61■□□□□ 0.41
RRP1B-201ENST00000340648 LRSAM1Q6UWE0 723 aa17.61■□□□□ 0.41
RRP1B-201ENST00000340648 NSD2O96028 1365 aa17.61■□□□□ 0.41
RRP1B-201ENST00000340648 MCM5P33992 734 aa17.61■□□□□ 0.41
RRP1B-201ENST00000340648 SDSP20132 328 aa17.61■□□□□ 0.41
RRP1B-201ENST00000340648 PRPF40BQ6NWY9 871 aaKnown RBP17.61■□□□□ 0.41
RRP1B-201ENST00000340648 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
RRP1B-201ENST00000340648 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
RRP1B-201ENST00000340648 ADCY5O95622 1261 aa17.6■□□□□ 0.41
RRP1B-201ENST00000340648 CYB5RLQ6IPT4 315 aa17.6■□□□□ 0.41
RRP1B-201ENST00000340648 BLMP54132 1417 aaPredicted RBP17.6■□□□□ 0.41
RRP1B-201ENST00000340648 TMX3Q96JJ7 454 aa17.6■□□□□ 0.41
RRP1B-201ENST00000340648 C14orf93Q9H972 538 aaKnown RBP17.6■□□□□ 0.41
RRP1B-201ENST00000340648 PRIM1P49642 420 aaKnown RBP17.59■□□□□ 0.41
RRP1B-201ENST00000340648 ANKRD20A12PQ8NF67 263 aa17.59■□□□□ 0.41
RRP1B-201ENST00000340648 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
RRP1B-201ENST00000340648 ITSN2Q9NZM3 1697 aa17.59■□□□□ 0.41
RRP1B-201ENST00000340648 WDR62O43379 1518 aa17.59■□□□□ 0.41
RRP1B-201ENST00000340648 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
RRP1B-201ENST00000340648 SAFBQ15424 915 aaKnown RBP eCLIP17.59■□□□□ 0.41
RRP1B-201ENST00000340648 PCMTD1Q96MG8 357 aaPredicted RBP17.59■□□□□ 0.41
RRP1B-201ENST00000340648 ZNF830Q96NB3 372 aaPredicted RBP17.59■□□□□ 0.41
RRP1B-201ENST00000340648 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.41
RRP1B-201ENST00000340648 DYNC1I1O14576 645 aa17.58■□□□□ 0.41
RRP1B-201ENST00000340648 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.41
RRP1B-201ENST00000340648 DDX11Q96FC9 970 aa17.58■□□□□ 0.41
RRP1B-201ENST00000340648 TTLL5Q6EMB2 1281 aa17.58■□□□□ 0.4
RRP1B-201ENST00000340648 CCDC70Q6NSX1 233 aa17.58■□□□□ 0.4
RRP1B-201ENST00000340648 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.4
RRP1B-201ENST00000340648 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.4
RRP1B-201ENST00000340648 LRRFIP2Q9Y608 721 aaKnown RBP17.57■□□□□ 0.4
RRP1B-201ENST00000340648 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
RRP1B-201ENST00000340648 HSP90B2PQ58FF3 399 aa17.57■□□□□ 0.4
RRP1B-201ENST00000340648 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
RRP1B-201ENST00000340648 KIF1BPQ96EK5 621 aa17.57■□□□□ 0.4
RRP1B-201ENST00000340648 CLSTN1O94985 981 aa17.57■□□□□ 0.4
RRP1B-201ENST00000340648 RAPGEF4Q8WZA2 1011 aa17.57■□□□□ 0.4
RRP1B-201ENST00000340648 LIMCH1Q9UPQ0 1083 aa17.57■□□□□ 0.4
RRP1B-201ENST00000340648 ZHX1Q9UKY1 873 aaPredicted RBP17.56■□□□□ 0.4
RRP1B-201ENST00000340648 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
RRP1B-201ENST00000340648 SERPINC1P01008 464 aa17.56■□□□□ 0.4
RRP1B-201ENST00000340648 FAM177A1Q8N128 213 aaPredicted RBP17.56■□□□□ 0.4
RRP1B-201ENST00000340648 ATP2B1P20020 1258 aa17.56■□□□□ 0.4
RRP1B-201ENST00000340648 ARHGAP45Q92619 1136 aa17.56■□□□□ 0.4
RRP1B-201ENST00000340648 ZKSCAN5Q9Y2L8 839 aa17.56■□□□□ 0.4
RRP1B-201ENST00000340648 CEP57L1Q8IYX8 460 aa17.55■□□□□ 0.4
RRP1B-201ENST00000340648 CFAP45Q9UL16 551 aa17.55■□□□□ 0.4
RRP1B-201ENST00000340648 FAM69CQ0P6D2 419 aa17.55■□□□□ 0.4
RRP1B-201ENST00000340648 C16orf45Q96MC5 204 aaPredicted RBP17.55■□□□□ 0.4
RRP1B-201ENST00000340648 ATP10BO94823 1461 aa17.55■□□□□ 0.4
RRP1B-201ENST00000340648 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
RRP1B-201ENST00000340648 ZGPATQ8N5A5 531 aaKnown RBP17.55■□□□□ 0.4
RRP1B-201ENST00000340648 MRPL50Q8N5N7 158 aaKnown RBP17.55■□□□□ 0.4
RRP1B-201ENST00000340648 MEIS3Q99687 375 aa17.55■□□□□ 0.4
RRP1B-201ENST00000340648 ANKRD36BQ8N2N9 1353 aa17.54■□□□□ 0.4
RRP1B-201ENST00000340648 CCP110O43303 1012 aa17.54■□□□□ 0.4
RRP1B-201ENST00000340648 STX6O43752 255 aa17.54■□□□□ 0.4
RRP1B-201ENST00000340648 GLRX3O76003 335 aaKnown RBP17.54■□□□□ 0.4
RRP1B-201ENST00000340648 PPP4R3BQ5MIZ7 849 aa17.54■□□□□ 0.4
RRP1B-201ENST00000340648 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
RRP1B-201ENST00000340648 PLEKHO1Q53GL0 409 aaPredicted RBP17.54■□□□□ 0.4
RRP1B-201ENST00000340648 ERICH4A6NGS2 130 aa17.54■□□□□ 0.4
RRP1B-201ENST00000340648 NLRP2Q9NX02 1062 aa17.54■□□□□ 0.4
RRP1B-201ENST00000340648 PTPRCP08575 1304 aa17.54■□□□□ 0.4
RRP1B-201ENST00000340648 OFD1O75665 1012 aa17.53■□□□□ 0.4
RRP1B-201ENST00000340648 EIF2AK4Q9P2K8 1649 aaKnown RBP17.53■□□□□ 0.4
RRP1B-201ENST00000340648 ERICH2A1L162 156 aa17.53■□□□□ 0.4
RRP1B-201ENST00000340648 FYB1O15117 783 aa17.53■□□□□ 0.4
RRP1B-201ENST00000340648 RAB11FIP3O75154 756 aa17.53■□□□□ 0.4
RRP1B-201ENST00000340648 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
RRP1B-201ENST00000340648 SPDYE4A6NLX3 237 aa17.53■□□□□ 0.4
RRP1B-201ENST00000340648 SETQ01105 290 aaPredicted RBP17.53■□□□□ 0.4
RRP1B-201ENST00000340648 SYCP2Q9BX26 1530 aa17.52■□□□□ 0.4
RRP1B-201ENST00000340648 GIMAP6Q6P9H5 292 aa17.52■□□□□ 0.4
RRP1B-201ENST00000340648 A2MP01023 1474 aa17.52■□□□□ 0.4
RRP1B-201ENST00000340648 C8orf58Q8NAV2 365 aa17.52■□□□□ 0.4
RRP1B-201ENST00000340648 ACBD3Q9H3P7 528 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms