RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 TNS1Q9HBL0 1735 aaKnown RBP19.19■□□□□ 0.66
CTSL-201ENST00000340342 IL13P35225 146 aa19.18■□□□□ 0.66
CTSL-201ENST00000340342 EN1Q05925 392 aaPredicted RBP19.18■□□□□ 0.66
CTSL-201ENST00000340342 IGSF1Q8N6C5 1336 aa19.17■□□□□ 0.66
CTSL-201ENST00000340342 RAPGEF4Q8WZA2 1011 aa19.17■□□□□ 0.66
CTSL-201ENST00000340342 BCL11BQ9C0K0 894 aaPredicted RBP19.17■□□□□ 0.66
CTSL-201ENST00000340342 KAT6BQ8WYB5 2073 aa19.15■□□□□ 0.66
CTSL-201ENST00000340342 DIAPH1O60610 1272 aaKnown RBP19.15■□□□□ 0.66
CTSL-201ENST00000340342 RALBP1Q15311 655 aa19.15■□□□□ 0.66
CTSL-201ENST00000340342 ZCRB1Q8TBF4 217 aaKnown RBP19.15■□□□□ 0.66
CTSL-201ENST00000340342 CAMKK2Q96RR4 588 aa19.15■□□□□ 0.66
CTSL-201ENST00000340342 PKD1L3Q7Z443 1732 aa19.15■□□□□ 0.66
CTSL-201ENST00000340342 AEBP1Q8IUX7 1158 aa19.14■□□□□ 0.65
CTSL-201ENST00000340342 PLSCR1O15162 318 aa19.13■□□□□ 0.65
CTSL-201ENST00000340342 TATP17735 454 aaPredicted RBP19.13■□□□□ 0.65
CTSL-201ENST00000340342 EZH2Q15910 746 aaKnown RBP19.13■□□□□ 0.65
CTSL-201ENST00000340342 DDX54Q8TDD1 881 aaKnown RBP19.13■□□□□ 0.65
CTSL-201ENST00000340342 CFAP53Q96M91 514 aa19.12■□□□□ 0.65
CTSL-201ENST00000340342 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
CTSL-201ENST00000340342 SULT6B1Q6IMI4 303 aa19.11■□□□□ 0.65
CTSL-201ENST00000340342 MYBBP1AQ9BQG0 1328 aaKnown RBP19.1■□□□□ 0.65
CTSL-201ENST00000340342 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
CTSL-201ENST00000340342 HMOX1P09601 288 aa19.09■□□□□ 0.65
CTSL-201ENST00000340342 KDRP35968 1356 aa19.09■□□□□ 0.65
CTSL-201ENST00000340342 PTF1AQ7RTS3 328 aa19.08■□□□□ 0.65
CTSL-201ENST00000340342 KCNQ2O43526 872 aa19.08■□□□□ 0.64
CTSL-201ENST00000340342 ACSBG1Q96GR2 724 aa19.07■□□□□ 0.64
CTSL-201ENST00000340342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.07■□□□□ 0.642e-6■□□□□ 11.1
CTSL-201ENST00000340342 DOT1LQ8TEK3 1739 aa19.07■□□□□ 0.64
CTSL-201ENST00000340342 NHSQ6T4R5 1651 aa19.06■□□□□ 0.64
CTSL-201ENST00000340342 RGPD3A6NKT7 1758 aaPredicted RBP19.06■□□□□ 0.64
CTSL-201ENST00000340342 RGPD4Q7Z3J3 1758 aa19.06■□□□□ 0.64
CTSL-201ENST00000340342 SPG7Q9UQ90 795 aa19.06■□□□□ 0.64
CTSL-201ENST00000340342 PCDH11XQ9BZA7 1347 aa19.05■□□□□ 0.64
CTSL-201ENST00000340342 PCDH11YQ9BZA8 1340 aa19.05■□□□□ 0.64
CTSL-201ENST00000340342 CYP27B1O15528 508 aa19.04■□□□□ 0.64
CTSL-201ENST00000340342 RREB1Q92766 1687 aa19.04■□□□□ 0.64
CTSL-201ENST00000340342 TOGARAM1Q9Y4F4 1720 aa19.03■□□□□ 0.64
CTSL-201ENST00000340342 PLEKHG2Q9H7P9 1386 aa19.03■□□□□ 0.64
CTSL-201ENST00000340342 NUDCQ9Y266 331 aa19.03■□□□□ 0.64
CTSL-201ENST00000340342 U2AF1L5P0DN76 240 aaPredicted RBP19.02■□□□□ 0.64
CTSL-201ENST00000340342 PRIM1P49642 420 aaKnown RBP19.02■□□□□ 0.64
CTSL-201ENST00000340342 U2AF1Q01081 240 aaKnown RBP eCLIP19.02■□□□□ 0.64
CTSL-201ENST00000340342 NBPF14Q5TI25 921 aa19.02■□□□□ 0.64
CTSL-201ENST00000340342 PROM2Q8N271 834 aa19.01■□□□□ 0.63
CTSL-201ENST00000340342 BTAF1O14981 1849 aa19.01■□□□□ 0.63
CTSL-201ENST00000340342 ITGB4P16144 1822 aa19.01■□□□□ 0.63
CTSL-201ENST00000340342 VIRMAQ69YN4 1812 aaKnown RBP19.01■□□□□ 0.63
CTSL-201ENST00000340342 ANP32CO43423 234 aa19■□□□□ 0.63
CTSL-201ENST00000340342 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
CTSL-201ENST00000340342 TXNRD1Q16881 649 aa19■□□□□ 0.63
CTSL-201ENST00000340342 PLEKHO1Q53GL0 409 aaPredicted RBP19■□□□□ 0.63
CTSL-201ENST00000340342 SYTL4Q96C24 671 aaPredicted RBP19■□□□□ 0.63
CTSL-201ENST00000340342 RSPH6AQ9H0K4 717 aa19■□□□□ 0.63
CTSL-201ENST00000340342 NUP188Q5SRE5 1749 aa18.99■□□□□ 0.63
CTSL-201ENST00000340342 PHKG2P15735 406 aa18.99■□□□□ 0.63
CTSL-201ENST00000340342 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
CTSL-201ENST00000340342 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
CTSL-201ENST00000340342 R3HDM1Q15032 1099 aaKnown RBP18.98■□□□□ 0.63
CTSL-201ENST00000340342 AMOTQ4VCS5 1084 aa18.98■□□□□ 0.63
CTSL-201ENST00000340342 IFNL2Q8IZJ0 200 aa18.98■□□□□ 0.63
CTSL-201ENST00000340342 PSDA5PKW4 1024 aaPredicted RBP18.97■□□□□ 0.63
CTSL-201ENST00000340342 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
CTSL-201ENST00000340342 SCN11AQ9UI33 1791 aa18.95■□□□□ 0.62
CTSL-201ENST00000340342 MTHFSDQ2M296 383 aaKnown RBP18.95■□□□□ 0.62
CTSL-201ENST00000340342 PHACTR3Q96KR7 559 aa18.95■□□□□ 0.62
CTSL-201ENST00000340342 FCHSD2O94868 740 aa18.94■□□□□ 0.62
CTSL-201ENST00000340342 KDM6AO15550 1401 aaPredicted RBP18.94■□□□□ 0.62
CTSL-201ENST00000340342 C1orf141Q5JVX7 400 aa18.93■□□□□ 0.62
CTSL-201ENST00000340342 SLC27A3Q5K4L6 730 aa18.93■□□□□ 0.62
CTSL-201ENST00000340342 SRCAPQ6ZRS2 3230 aa18.93■□□□□ 0.62
CTSL-201ENST00000340342 DLG5Q8TDM6 1919 aa18.93■□□□□ 0.62
CTSL-201ENST00000340342 HSP90AB1P08238 724 aaKnown RBP18.92■□□□□ 0.62
CTSL-201ENST00000340342 MPRIPQ6WCQ1 1025 aa18.91■□□□□ 0.62
CTSL-201ENST00000340342 AKAP4Q5JQC9 854 aa18.91■□□□□ 0.62
CTSL-201ENST00000340342 HMGB2P26583 209 aaKnown RBP18.9■□□□□ 0.62
CTSL-201ENST00000340342 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
CTSL-201ENST00000340342 DCAF5Q96JK2 942 aa18.9■□□□□ 0.62
CTSL-201ENST00000340342 PLEKHF1Q96S99 279 aa18.9■□□□□ 0.62
CTSL-201ENST00000340342 LRRC4BQ9NT99 713 aa18.9■□□□□ 0.62
CTSL-201ENST00000340342 STK32BQ9NY57 414 aa18.9■□□□□ 0.62
CTSL-201ENST00000340342 LY75O60449 1722 aa18.89■□□□□ 0.62
CTSL-201ENST00000340342 ADAMTS7Q9UKP4 1686 aa18.89■□□□□ 0.61
CTSL-201ENST00000340342 ERVV-2B6SEH9 535 aa18.88■□□□□ 0.61
CTSL-201ENST00000340342 SLC15A2Q16348 729 aa18.88■□□□□ 0.61
CTSL-201ENST00000340342 GAS2L2Q8NHY3 880 aa18.88■□□□□ 0.61
CTSL-201ENST00000340342 PIGBQ92521 554 aa18.88■□□□□ 0.61
CTSL-201ENST00000340342 SMARCC1Q92922 1105 aaPredicted RBP18.88■□□□□ 0.61
CTSL-201ENST00000340342 ANO8Q9HCE9 1232 aaPredicted RBP18.88■□□□□ 0.61
CTSL-201ENST00000340342 TMOD3Q9NYL9 352 aa18.88■□□□□ 0.61
CTSL-201ENST00000340342 ADAMTS8Q9UP79 889 aa18.88■□□□□ 0.61
CTSL-201ENST00000340342 MAP3K5Q99683 1374 aa18.87■□□□□ 0.61
CTSL-201ENST00000340342 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
CTSL-201ENST00000340342 LGR6Q9HBX8 967 aa18.87■□□□□ 0.61
CTSL-201ENST00000340342 MRS2Q9HD23 443 aa18.87■□□□□ 0.61
CTSL-201ENST00000340342 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
CTSL-201ENST00000340342 CCNL1Q9UK58 526 aaPredicted RBP18.85■□□□□ 0.61
CTSL-201ENST00000340342 MAPK8IP3Q9UPT6 1336 aa18.85■□□□□ 0.61
CTSL-201ENST00000340342 GNAT3A8MTJ3 354 aa18.84■□□□□ 0.61
CTSL-201ENST00000340342 RNMTO43148 476 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms