RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 ARHGAP29Q52LW3 1261 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 FAM114A1Q8IWE2 563 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 CEP57L1Q8IYX8 460 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 SH3GL3Q99963 347 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 CXorf56Q9H5V9 222 aa14.79□□□□□ -0.04
BRPF3-201ENST00000339717 TTC36A6NLP5 189 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 PNISRQ8TF01 805 aaKnown RBP14.78□□□□□ -0.04
BRPF3-201ENST00000339717 SOGA1O94964 1423 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 CASTP20810 708 aaKnown RBP14.78□□□□□ -0.04
BRPF3-201ENST00000339717 ARHGAP25P42331 645 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 SDF4Q9BRK5 362 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 LNPKQ9C0E8 428 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 IRAK4Q9NWZ3 460 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 SEPT6Q14141 434 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 NBPF20Q3BBV1 942 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 SNX21Q969T3 373 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 RAI14Q9P0K7 980 aa14.78□□□□□ -0.04
BRPF3-201ENST00000339717 HNRNPH2P55795 449 aaKnown RBP14.77□□□□□ -0.04
BRPF3-201ENST00000339717 CLASRPQ8N2M8 674 aaKnown RBP14.77□□□□□ -0.04
BRPF3-201ENST00000339717 AKAP17AQ02040 695 aaKnown RBP14.77□□□□□ -0.04
BRPF3-201ENST00000339717 MSL1Q68DK7 614 aa14.77□□□□□ -0.04
BRPF3-201ENST00000339717 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.04
BRPF3-201ENST00000339717 MYO1CO00159 1063 aa14.77□□□□□ -0.05
BRPF3-201ENST00000339717 MAGEA9P43362 315 aa14.77□□□□□ -0.05
BRPF3-201ENST00000339717 NEK4P51957 841 aa14.77□□□□□ -0.05
BRPF3-201ENST00000339717 SH2D4BQ5SQS7 431 aa14.77□□□□□ -0.05
BRPF3-201ENST00000339717 KANK4Q5T7N3 995 aaPredicted RBP14.77□□□□□ -0.05
BRPF3-201ENST00000339717 KRT85P78386 507 aa14.77□□□□□ -0.05
BRPF3-201ENST00000339717 CCDC121Q6ZUS5 278 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 SCLT1Q96NL6 688 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 CCDC38Q502W7 563 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 FAM177A1Q8N128 213 aaPredicted RBP14.76□□□□□ -0.05
BRPF3-201ENST00000339717 CDCA7LQ96GN5 454 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 ODF2Q5BJF6 829 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 CCDC148Q8NFR7 591 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 PANK1Q8TE04 598 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 CCDC114Q96M63 670 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 TRMT1Q9NXH9 659 aaKnown RBP14.76□□□□□ -0.05
BRPF3-201ENST00000339717 DHX16O60231 1041 aaKnown RBP14.76□□□□□ -0.05
BRPF3-201ENST00000339717 SMC5Q8IY18 1101 aa14.76□□□□□ -0.05
BRPF3-201ENST00000339717 ZBTB22O15209 634 aa14.75□□□□□ -0.05
BRPF3-201ENST00000339717 SPATA24Q86W54 205 aa14.75□□□□□ -0.05
BRPF3-201ENST00000339717 PANK3Q9H999 370 aa14.75□□□□□ -0.05
BRPF3-201ENST00000339717 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
BRPF3-201ENST00000339717 ANKRD18BA2A2Z9 1011 aa14.75□□□□□ -0.05
BRPF3-201ENST00000339717 PPP1R12AO14974 1030 aaPredicted RBP14.75□□□□□ -0.05
BRPF3-201ENST00000339717 GUCY2CP25092 1073 aa14.75□□□□□ -0.05
BRPF3-201ENST00000339717 WHAMMP3Q1A5X7 153 aa14.75□□□□□ -0.05
BRPF3-201ENST00000339717 HDXQ7Z353 690 aa14.75□□□□□ -0.05
BRPF3-201ENST00000339717 TRIM6Q9C030 488 aaPredicted RBP14.75□□□□□ -0.05
BRPF3-201ENST00000339717 A0A087WUV0 522 aaPredicted RBP14.74□□□□□ -0.05
BRPF3-201ENST00000339717 CCDC150Q8NCX0 1101 aa14.74□□□□□ -0.05
BRPF3-201ENST00000339717 CTCFLQ8NI51 663 aaPredicted RBP14.74□□□□□ -0.05
BRPF3-201ENST00000339717 ZKSCAN1P17029 563 aaPredicted RBP14.74□□□□□ -0.05
BRPF3-201ENST00000339717 RAD51AP2Q09MP3 1159 aa14.74□□□□□ -0.05
BRPF3-201ENST00000339717 MCM6Q14566 821 aa14.74□□□□□ -0.05
BRPF3-201ENST00000339717 E2F4Q16254 413 aa14.74□□□□□ -0.05
BRPF3-201ENST00000339717 DHX29Q7Z478 1369 aaKnown RBP14.74□□□□□ -0.05
BRPF3-201ENST00000339717 GIGYF2Q6Y7W6 1299 aaKnown RBP14.74□□□□□ -0.05
BRPF3-201ENST00000339717 GOPCQ9HD26 462 aa14.74□□□□□ -0.05
BRPF3-201ENST00000339717 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
BRPF3-201ENST00000339717 NEK11Q8NG66 645 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 MRFAP1L1Q96HT8 127 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 GPATCH3Q96I76 525 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
BRPF3-201ENST00000339717 LRRC23Q53EV4 343 aaPredicted RBP14.73□□□□□ -0.05
BRPF3-201ENST00000339717 RBSNQ9H1K0 784 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.73□□□□□ -0.05
BRPF3-201ENST00000339717 KIF5CO60282 957 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 LMNTD2Q8IXW0 634 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
BRPF3-201ENST00000339717 SERPINC1P01008 464 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 OAS2P29728 719 aaKnown RBP14.73□□□□□ -0.05
BRPF3-201ENST00000339717 SPECC1LQ69YQ0 1117 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 MORC1Q86VD1 984 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 ANO2Q9NQ90 1003 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 DONSONQ9NYP3 566 aa14.73□□□□□ -0.05
BRPF3-201ENST00000339717 ATP8B1O43520 1251 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 NBPF9Q3BBW0 867 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 CALR3Q96L12 384 aaKnown RBP14.72□□□□□ -0.05
BRPF3-201ENST00000339717 ARHGAP35Q9NRY4 1499 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 SLC8A1P32418 973 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 CCDC186Q7Z3E2 898 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 RAD50Q92878 1312 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 ZMAT2Q96NC0 199 aaKnown RBP14.72□□□□□ -0.05
BRPF3-201ENST00000339717 RUFY2Q8WXA3 655 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 TSC1Q92574 1164 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 GOLGA1Q92805 767 aa14.72□□□□□ -0.05
BRPF3-201ENST00000339717 CCDC175P0C221 793 aa14.71□□□□□ -0.05
BRPF3-201ENST00000339717 PDCD2Q16342 344 aaPredicted RBP14.71□□□□□ -0.05
BRPF3-201ENST00000339717 CCDC27Q2M243 656 aa14.71□□□□□ -0.05
BRPF3-201ENST00000339717 FAM210AQ96ND0 272 aa14.71□□□□□ -0.05
BRPF3-201ENST00000339717 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
BRPF3-201ENST00000339717 SPATS2Q86XZ4 545 aaKnown RBP14.71□□□□□ -0.05
BRPF3-201ENST00000339717 GCC1Q96CN9 775 aa14.71□□□□□ -0.05
BRPF3-201ENST00000339717 UPF3BQ9BZI7 483 aaKnown RBP14.71□□□□□ -0.05
BRPF3-201ENST00000339717 ROCK1Q13464 1354 aa14.71□□□□□ -0.05
BRPF3-201ENST00000339717 FILIP1LQ4L180 1135 aa14.71□□□□□ -0.05
BRPF3-201ENST00000339717 SYT10Q6XYQ8 523 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms