RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 BCL9O00512 1426 aa17.32■□□□□ 0.36
SRSF3-201ENST00000339436 EXOC5O00471 708 aa17.31■□□□□ 0.36
SRSF3-201ENST00000339436 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
SRSF3-201ENST00000339436 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
SRSF3-201ENST00000339436 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
SRSF3-201ENST00000339436 TATP17735 454 aaPredicted RBP17.3■□□□□ 0.36
SRSF3-201ENST00000339436 MARCH10Q8NA82 808 aaPredicted RBP17.3■□□□□ 0.36
SRSF3-201ENST00000339436 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
SRSF3-201ENST00000339436 PRKRIP1Q9H875 184 aaPredicted RBP17.3■□□□□ 0.36
SRSF3-201ENST00000339436 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
SRSF3-201ENST00000339436 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
SRSF3-201ENST00000339436 FAM196AQ6ZSG2 479 aa17.29■□□□□ 0.36
SRSF3-201ENST00000339436 AEBP1Q8IUX7 1158 aa17.29■□□□□ 0.36
SRSF3-201ENST00000339436 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
SRSF3-201ENST00000339436 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
SRSF3-201ENST00000339436 RGPD3A6NKT7 1758 aaPredicted RBP17.27■□□□□ 0.36
SRSF3-201ENST00000339436 RGPD4Q7Z3J3 1758 aa17.27■□□□□ 0.36
SRSF3-201ENST00000339436 ITGB4P16144 1822 aa17.27■□□□□ 0.36
SRSF3-201ENST00000339436 BTAF1O14981 1849 aa17.27■□□□□ 0.35
SRSF3-201ENST00000339436 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
SRSF3-201ENST00000339436 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
SRSF3-201ENST00000339436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.25■□□□□ 0.353e-12■□□□□ 9.3
SRSF3-201ENST00000339436 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
SRSF3-201ENST00000339436 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
SRSF3-201ENST00000339436 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
SRSF3-201ENST00000339436 HMOX1P09601 288 aa17.23■□□□□ 0.35
SRSF3-201ENST00000339436 CCDC125Q86Z20 511 aa17.23■□□□□ 0.35
SRSF3-201ENST00000339436 CYP27B1O15528 508 aa17.22■□□□□ 0.35
SRSF3-201ENST00000339436 SPG7Q9UQ90 795 aa17.22■□□□□ 0.35
SRSF3-201ENST00000339436 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
SRSF3-201ENST00000339436 RREB1Q92766 1687 aa17.21■□□□□ 0.35
SRSF3-201ENST00000339436 TRIM37O94972 964 aa17.21■□□□□ 0.35
SRSF3-201ENST00000339436 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
SRSF3-201ENST00000339436 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
SRSF3-201ENST00000339436 ANP32CO43423 234 aa17.19■□□□□ 0.34
SRSF3-201ENST00000339436 U2AF1L5P0DN76 240 aaPredicted RBP17.19■□□□□ 0.34
SRSF3-201ENST00000339436 U2AF1Q01081 240 aaKnown RBP eCLIP17.19■□□□□ 0.342e-15■■■□□ 17.2
SRSF3-201ENST00000339436 AMOTQ4VCS5 1084 aa17.19■□□□□ 0.34
SRSF3-201ENST00000339436 PLEKHO1Q53GL0 409 aaPredicted RBP17.19■□□□□ 0.34
SRSF3-201ENST00000339436 RSPH6AQ9H0K4 717 aa17.19■□□□□ 0.34
SRSF3-201ENST00000339436 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
SRSF3-201ENST00000339436 LY75O60449 1722 aa17.17■□□□□ 0.34
SRSF3-201ENST00000339436 NUP188Q5SRE5 1749 aa17.17■□□□□ 0.34
SRSF3-201ENST00000339436 PHKG2P15735 406 aa17.17■□□□□ 0.34
SRSF3-201ENST00000339436 ZNF530Q6P9A1 599 aaPredicted RBP17.17■□□□□ 0.34
SRSF3-201ENST00000339436 BCL11BQ9C0K0 894 aaPredicted RBP17.17■□□□□ 0.34
SRSF3-201ENST00000339436 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
SRSF3-201ENST00000339436 PTF1AQ7RTS3 328 aa17.16■□□□□ 0.34
SRSF3-201ENST00000339436 IFNL2Q8IZJ0 200 aa17.16■□□□□ 0.34
SRSF3-201ENST00000339436 ACSBG1Q96GR2 724 aa17.16■□□□□ 0.34
SRSF3-201ENST00000339436 KDM6AO15550 1401 aaPredicted RBP17.16■□□□□ 0.34
SRSF3-201ENST00000339436 KCNQ2O43526 872 aa17.16■□□□□ 0.34
SRSF3-201ENST00000339436 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
SRSF3-201ENST00000339436 FCHSD2O94868 740 aa17.15■□□□□ 0.34
SRSF3-201ENST00000339436 BAG6P46379 1132 aa17.15■□□□□ 0.34
SRSF3-201ENST00000339436 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
SRSF3-201ENST00000339436 MRC1P22897 1456 aa17.14■□□□□ 0.33
SRSF3-201ENST00000339436 SIPA1L3O60292 1781 aaPredicted RBP17.13■□□□□ 0.33
SRSF3-201ENST00000339436 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
SRSF3-201ENST00000339436 APBA3O96018 575 aa17.12■□□□□ 0.33
SRSF3-201ENST00000339436 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
SRSF3-201ENST00000339436 PRIM1P49642 420 aaKnown RBP17.12■□□□□ 0.33
SRSF3-201ENST00000339436 MTHFSDQ2M296 383 aaKnown RBP17.12■□□□□ 0.33
SRSF3-201ENST00000339436 SYTL4Q96C24 671 aaPredicted RBP17.11■□□□□ 0.33
SRSF3-201ENST00000339436 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
SRSF3-201ENST00000339436 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
SRSF3-201ENST00000339436 AKAP4Q5JQC9 854 aa17.11■□□□□ 0.33
SRSF3-201ENST00000339436 GAS2L2Q8NHY3 880 aa17.11■□□□□ 0.33
SRSF3-201ENST00000339436 DCAF5Q96JK2 942 aa17.11■□□□□ 0.33
SRSF3-201ENST00000339436 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
SRSF3-201ENST00000339436 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
SRSF3-201ENST00000339436 TAF1LQ8IZX4 1826 aa17.1■□□□□ 0.33
SRSF3-201ENST00000339436 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.33
SRSF3-201ENST00000339436 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
SRSF3-201ENST00000339436 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
SRSF3-201ENST00000339436 PLEKHF1Q96S99 279 aa17.09■□□□□ 0.33
SRSF3-201ENST00000339436 PLSCR1O15162 318 aa17.08■□□□□ 0.32
SRSF3-201ENST00000339436 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
SRSF3-201ENST00000339436 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
SRSF3-201ENST00000339436 C5P01031 1676 aa17.07■□□□□ 0.32
SRSF3-201ENST00000339436 UBR2Q8IWV8 1755 aa17.07■□□□□ 0.32
SRSF3-201ENST00000339436 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
SRSF3-201ENST00000339436 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
SRSF3-201ENST00000339436 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
SRSF3-201ENST00000339436 ZNF831Q5JPB2 1677 aa17.06■□□□□ 0.32
SRSF3-201ENST00000339436 NEFMP07197 916 aa17.06■□□□□ 0.32
SRSF3-201ENST00000339436 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
SRSF3-201ENST00000339436 TMOD3Q9NYL9 352 aa17.06■□□□□ 0.32
SRSF3-201ENST00000339436 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
SRSF3-201ENST00000339436 PIGBQ92521 554 aa17.05■□□□□ 0.32
SRSF3-201ENST00000339436 ADAMTS8Q9UP79 889 aa17.05■□□□□ 0.32
SRSF3-201ENST00000339436 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
SRSF3-201ENST00000339436 PALLDQ8WX93 1383 aa17.04■□□□□ 0.32
SRSF3-201ENST00000339436 RNMTO43148 476 aaKnown RBP17.04■□□□□ 0.32
SRSF3-201ENST00000339436 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
SRSF3-201ENST00000339436 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
SRSF3-201ENST00000339436 COL5A3P25940 1745 aaPredicted RBP17.02■□□□□ 0.32
SRSF3-201ENST00000339436 CABP4P57796 275 aa17.02■□□□□ 0.32
SRSF3-201ENST00000339436 TXNRD1Q16881 649 aa17.02■□□□□ 0.32
SRSF3-201ENST00000339436 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms