RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 STRN4Q9NRL3 753 aa19.18■□□□□ 0.66
CDK5RAP3-201ENST00000338399 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
CDK5RAP3-201ENST00000338399 RAPGEF4Q8WZA2 1011 aa19.17■□□□□ 0.66
CDK5RAP3-201ENST00000338399 NUTM2BA6NNL0 878 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 NUTM2EB1AL46 878 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 GNAI1P63096 354 aa19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 AMOTQ4VCS5 1084 aa19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 NUTM2AQ8IVF1 878 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 BTG4Q9NY30 223 aa19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 RNF123Q5XPI4 1314 aa19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 HTATSF1O43719 755 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 IFT57Q9NWB7 429 aa19.16■□□□□ 0.66
CDK5RAP3-201ENST00000338399 LARP1Q6PKG0 1096 aaKnown RBP19.15■□□□□ 0.66
CDK5RAP3-201ENST00000338399 ZNF853P0CG23 659 aa19.14■□□□□ 0.65
CDK5RAP3-201ENST00000338399 TATP17735 454 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-201ENST00000338399 EXOSC9Q06265 439 aaKnown RBP19.14■□□□□ 0.65
CDK5RAP3-201ENST00000338399 ZNF530Q6P9A1 599 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-201ENST00000338399 CFAP44Q96MT7 982 aa19.14■□□□□ 0.65
CDK5RAP3-201ENST00000338399 MEGF6O75095 1541 aa19.14■□□□□ 0.65
CDK5RAP3-201ENST00000338399 JCADQ9P266 1359 aa19.12■□□□□ 0.65
CDK5RAP3-201ENST00000338399 CRB1P82279 1406 aa19.12■□□□□ 0.65
CDK5RAP3-201ENST00000338399 RRP1P56182 461 aaKnown RBP19.12■□□□□ 0.65
CDK5RAP3-201ENST00000338399 MBIPQ9NS73 344 aa19.12■□□□□ 0.65
CDK5RAP3-201ENST00000338399 AKAP4Q5JQC9 854 aa19.11■□□□□ 0.65
CDK5RAP3-201ENST00000338399 IL17REQ8NFR9 667 aa19.11■□□□□ 0.65
CDK5RAP3-201ENST00000338399 CARD10Q9BWT7 1032 aa19.11■□□□□ 0.65
CDK5RAP3-201ENST00000338399 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
CDK5RAP3-201ENST00000338399 C1orf141Q5JVX7 400 aa19.1■□□□□ 0.65
CDK5RAP3-201ENST00000338399 LRRC37A3O60309 1634 aa19.1■□□□□ 0.65
CDK5RAP3-201ENST00000338399 VIRMAQ69YN4 1812 aaKnown RBP19.1■□□□□ 0.65
CDK5RAP3-201ENST00000338399 CHL1O00533 1208 aa19.09■□□□□ 0.65
CDK5RAP3-201ENST00000338399 SPG7Q9UQ90 795 aa19.09■□□□□ 0.65
CDK5RAP3-201ENST00000338399 PARP4Q9UKK3 1724 aaKnown RBP19.08■□□□□ 0.65
CDK5RAP3-201ENST00000338399 BCAR3O75815 825 aa19.08■□□□□ 0.65
CDK5RAP3-201ENST00000338399 HSPA1LP34931 641 aa19.08■□□□□ 0.65
CDK5RAP3-201ENST00000338399 LGR6Q9HBX8 967 aa19.08■□□□□ 0.65
CDK5RAP3-201ENST00000338399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.08■□□□□ 0.658e-10■□□□□ 11
CDK5RAP3-201ENST00000338399 USP35Q9P2H5 1018 aa19.08■□□□□ 0.65
CDK5RAP3-201ENST00000338399 PKD1L3Q7Z443 1732 aa19.08■□□□□ 0.64
CDK5RAP3-201ENST00000338399 PLIN1O60240 522 aa19.07■□□□□ 0.64
CDK5RAP3-201ENST00000338399 CT47B1P0C2W7 299 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP3-201ENST00000338399 MPRIPQ6WCQ1 1025 aa19.07■□□□□ 0.64
CDK5RAP3-201ENST00000338399 MIS18AQ9NYP9 233 aa19.07■□□□□ 0.64
CDK5RAP3-201ENST00000338399 PLEKHG2Q9H7P9 1386 aa19.07■□□□□ 0.64
CDK5RAP3-201ENST00000338399 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
CDK5RAP3-201ENST00000338399 OVOS2A0A0G2JMS6 1433 aa19.06■□□□□ 0.64
CDK5RAP3-201ENST00000338399 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
CDK5RAP3-201ENST00000338399 NRAPQ86VF7 1730 aa19.05■□□□□ 0.64
CDK5RAP3-201ENST00000338399 IL2RBP14784 551 aa19.05■□□□□ 0.64
CDK5RAP3-201ENST00000338399 RNMTO43148 476 aaKnown RBP19.05■□□□□ 0.64
CDK5RAP3-201ENST00000338399 TSPYL4Q9UJ04 414 aa19.05■□□□□ 0.64
CDK5RAP3-201ENST00000338399 PHKG2P15735 406 aa19.04■□□□□ 0.64
CDK5RAP3-201ENST00000338399 TSPYL6Q8N831 410 aa19.04■□□□□ 0.64
CDK5RAP3-201ENST00000338399 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 ELL2O00472 640 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 TAF7Q15545 349 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 IFNL2Q8IZJ0 200 aa19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 C8orf58Q8NAV2 365 aa19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 BCL2L13Q9BXK5 485 aa19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 SPATA31A6Q5VVP1 1343 aa19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 ZCRB1Q8TBF4 217 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP3-201ENST00000338399 CYP27B1O15528 508 aa19.02■□□□□ 0.64
CDK5RAP3-201ENST00000338399 SLIT2O94813 1529 aa19.02■□□□□ 0.63
CDK5RAP3-201ENST00000338399 SCN11AQ9UI33 1791 aa19.02■□□□□ 0.63
CDK5RAP3-201ENST00000338399 VAMP4O75379 141 aa19.01■□□□□ 0.63
CDK5RAP3-201ENST00000338399 TEFQ10587 303 aa19.01■□□□□ 0.63
CDK5RAP3-201ENST00000338399 TWISTNBQ3B726 338 aaPredicted RBP19.01■□□□□ 0.63
CDK5RAP3-201ENST00000338399 ADAMTS7Q9UKP4 1686 aa19.01■□□□□ 0.63
CDK5RAP3-201ENST00000338399 KRT24Q2M2I5 525 aa19.01■□□□□ 0.63
CDK5RAP3-201ENST00000338399 C8orf37Q96NL8 207 aa19.01■□□□□ 0.63
CDK5RAP3-201ENST00000338399 LRP6O75581 1613 aa19■□□□□ 0.63
CDK5RAP3-201ENST00000338399 SSH1Q8WYL5 1049 aa19■□□□□ 0.63
CDK5RAP3-201ENST00000338399 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
CDK5RAP3-201ENST00000338399 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
CDK5RAP3-201ENST00000338399 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
CDK5RAP3-201ENST00000338399 KDM6AO15550 1401 aaPredicted RBP18.99■□□□□ 0.63
CDK5RAP3-201ENST00000338399 SHANK3Q9BYB0 1731 aa18.99■□□□□ 0.63
CDK5RAP3-201ENST00000338399 NGLY1Q96IV0 654 aa18.99■□□□□ 0.63
CDK5RAP3-201ENST00000338399 SMC4Q9NTJ3 1288 aa18.99■□□□□ 0.63
CDK5RAP3-201ENST00000338399 ERICH6BQ5W0A0 696 aa18.99■□□□□ 0.63
CDK5RAP3-201ENST00000338399 SIPA1L3O60292 1781 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-201ENST00000338399 C20orf194Q5TEA3 1177 aa18.98■□□□□ 0.63
CDK5RAP3-201ENST00000338399 FRAT1Q92837 279 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-201ENST00000338399 ZNF428Q96B54 188 aa18.98■□□□□ 0.63
CDK5RAP3-201ENST00000338399 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 CANXP27824 592 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 ALDH1L2Q3SY69 923 aa18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 KDM3BQ7LBC6 1761 aa18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 DISP2A7MBM2 1401 aa18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 SPATA31A1Q5TZJ5 1347 aa18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 UNC5CLQ8IV45 518 aa18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 DCAF5Q96JK2 942 aa18.97■□□□□ 0.63
CDK5RAP3-201ENST00000338399 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms