RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 NSD3Q9BZ95 1437 aa22.31■■□□□ 1.16
MUC1-201ENST00000337604 TUBGCP6Q96RT7 1819 aa22.3■■□□□ 1.16
MUC1-201ENST00000337604 MTFR1LQ9H019 292 aa22.3■■□□□ 1.16
MUC1-201ENST00000337604 QSER1Q2KHR3 1735 aa22.29■■□□□ 1.16
MUC1-201ENST00000337604 INSRP06213 1382 aa22.29■■□□□ 1.16
MUC1-201ENST00000337604 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
MUC1-201ENST00000337604 ZCRB1Q8TBF4 217 aaKnown RBP22.29■■□□□ 1.16
MUC1-201ENST00000337604 SMG6Q86US8 1419 aaKnown RBP22.29■■□□□ 1.16
MUC1-201ENST00000337604 ANKRD26Q9UPS8 1709 aa22.28■■□□□ 1.16
MUC1-201ENST00000337604 FLT4P35916 1363 aa22.28■■□□□ 1.16
MUC1-201ENST00000337604 PRIM1P49642 420 aaKnown RBP22.28■■□□□ 1.16
MUC1-201ENST00000337604 HSP90AB2PQ58FF8 381 aa22.28■■□□□ 1.16
MUC1-201ENST00000337604 AKT1S1Q96B36 256 aa22.27■■□□□ 1.16
MUC1-201ENST00000337604 TIMELESSQ9UNS1 1208 aa22.27■■□□□ 1.16
MUC1-201ENST00000337604 KIF24Q5T7B8 1368 aa22.26■■□□□ 1.15
MUC1-201ENST00000337604 KCNQ4P56696 695 aa22.26■■□□□ 1.15
MUC1-201ENST00000337604 SYTL4Q96C24 671 aaPredicted RBP22.26■■□□□ 1.15
MUC1-201ENST00000337604 SLC27A3Q5K4L6 730 aa22.25■■□□□ 1.15
MUC1-201ENST00000337604 CLSPNQ9HAW4 1339 aa22.25■■□□□ 1.15
MUC1-201ENST00000337604 YY1P25490 414 aa22.24■■□□□ 1.15
MUC1-201ENST00000337604 FHDC1Q9C0D6 1143 aaPredicted RBP22.24■■□□□ 1.15
MUC1-201ENST00000337604 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
MUC1-201ENST00000337604 UTRNP46939 3433 aa22.24■■□□□ 1.15
MUC1-201ENST00000337604 CGNL1Q0VF96 1302 aa22.24■■□□□ 1.15
MUC1-201ENST00000337604 COL24A1Q17RW2 1714 aa22.23■■□□□ 1.15
MUC1-201ENST00000337604 PNPLA7Q6ZV29 1317 aa22.23■■□□□ 1.15
MUC1-201ENST00000337604 PKD1L3Q7Z443 1732 aa22.23■■□□□ 1.15
MUC1-201ENST00000337604 NCAPD2Q15021 1401 aa22.23■■□□□ 1.15
MUC1-201ENST00000337604 RAPGEF4Q8WZA2 1011 aa22.22■■□□□ 1.15
MUC1-201ENST00000337604 SYT17Q9BSW7 474 aa22.22■■□□□ 1.15
MUC1-201ENST00000337604 TOGARAM1Q9Y4F4 1720 aa22.22■■□□□ 1.15
MUC1-201ENST00000337604 TATP17735 454 aaPredicted RBP22.2■■□□□ 1.14
MUC1-201ENST00000337604 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.14
MUC1-201ENST00000337604 MAP3K5Q99683 1374 aa22.18■■□□□ 1.14
MUC1-201ENST00000337604 PCDH11XQ9BZA7 1347 aa22.18■■□□□ 1.14
MUC1-201ENST00000337604 PCDH11YQ9BZA8 1340 aa22.18■■□□□ 1.14
MUC1-201ENST00000337604 ARXQ96QS3 562 aa22.18■■□□□ 1.14
MUC1-201ENST00000337604 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
MUC1-201ENST00000337604 CYP27B1O15528 508 aa22.17■■□□□ 1.14
MUC1-201ENST00000337604 DCAF8L1A6NGE4 600 aa22.16■■□□□ 1.14
MUC1-201ENST00000337604 CCNL1Q9UK58 526 aaPredicted RBP22.16■■□□□ 1.14
MUC1-201ENST00000337604 C5P01031 1676 aa22.16■■□□□ 1.14
MUC1-201ENST00000337604 ITGB4P16144 1822 aa22.15■■□□□ 1.14
MUC1-201ENST00000337604 TFCP2L1Q9NZI6 479 aa22.15■■□□□ 1.14
MUC1-201ENST00000337604 SLC16A10Q8TF71 515 aa22.14■■□□□ 1.13
MUC1-201ENST00000337604 TAF1LQ8IZX4 1826 aa22.13■■□□□ 1.13
MUC1-201ENST00000337604 WASHC2AQ641Q2 1341 aa22.13■■□□□ 1.13
MUC1-201ENST00000337604 PPM1GO15355 546 aaPredicted RBP22.13■■□□□ 1.13
MUC1-201ENST00000337604 PALLDQ8WX93 1383 aa22.12■■□□□ 1.13
MUC1-201ENST00000337604 POLKQ9UBT6 870 aa22.11■■□□□ 1.13
MUC1-201ENST00000337604 EYA1Q99502 592 aa22.1■■□□□ 1.13
MUC1-201ENST00000337604 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
MUC1-201ENST00000337604 HSPA5P11021 654 aaKnown RBP22.09■■□□□ 1.13
MUC1-201ENST00000337604 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
MUC1-201ENST00000337604 COL23A1Q86Y22 540 aaPredicted RBP22.08■■□□□ 1.13
MUC1-201ENST00000337604 CHD4Q14839 1912 aa22.08■■□□□ 1.12
MUC1-201ENST00000337604 C4BP0C0L5 1744 aa22.06■■□□□ 1.12
MUC1-201ENST00000337604 GOLGB1Q14789 3259 aaKnown RBP22.06■■□□□ 1.12
MUC1-201ENST00000337604 POLD1P28340 1107 aa22.06■■□□□ 1.12
MUC1-201ENST00000337604 EIF4G2P78344 907 aaKnown RBP eCLIP22.06■■□□□ 1.12
MUC1-201ENST00000337604 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
MUC1-201ENST00000337604 TNNT2P45379 298 aaPredicted RBP22.05■■□□□ 1.12
MUC1-201ENST00000337604 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
MUC1-201ENST00000337604 KLHL34Q8N239 644 aa22.04■■□□□ 1.12
MUC1-201ENST00000337604 PIGBQ92521 554 aa22.04■■□□□ 1.12
MUC1-201ENST00000337604 UBR3Q6ZT12 1888 aa22.03■■□□□ 1.12
MUC1-201ENST00000337604 AMIGO3Q86WK7 504 aa22.03■■□□□ 1.12
MUC1-201ENST00000337604 NLGN2Q8NFZ4 835 aa22.03■■□□□ 1.12
MUC1-201ENST00000337604 SPG7Q9UQ90 795 aa22.03■■□□□ 1.12
MUC1-201ENST00000337604 MSL1Q68DK7 614 aa22.02■■□□□ 1.12
MUC1-201ENST00000337604 PANK3Q9H999 370 aa22.02■■□□□ 1.12
MUC1-201ENST00000337604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.02■■□□□ 1.12
MUC1-201ENST00000337604 MSH5O43196 834 aa22.01■■□□□ 1.11
MUC1-201ENST00000337604 ZNF784Q8NCA9 323 aaPredicted RBP22.01■■□□□ 1.11
MUC1-201ENST00000337604 IGSF1Q8N6C5 1336 aa22.01■■□□□ 1.11
MUC1-201ENST00000337604 PHKG2P15735 406 aa22■■□□□ 1.11
MUC1-201ENST00000337604 SMARCC1Q92922 1105 aaPredicted RBP22■■□□□ 1.11
MUC1-201ENST00000337604 CCER1Q8TC90 406 aaPredicted RBP21.99■■□□□ 1.11
MUC1-201ENST00000337604 PLEKHG2Q9H7P9 1386 aa21.99■■□□□ 1.11
MUC1-201ENST00000337604 GPR162Q16538 588 aa21.97■■□□□ 1.11
MUC1-201ENST00000337604 SMIM5Q71RC9 77 aa21.97■■□□□ 1.11
MUC1-201ENST00000337604 LOC102724428A0A0B4J2F2 783 aa21.96■■□□□ 1.11
MUC1-201ENST00000337604 SIK1P57059 783 aa21.96■■□□□ 1.11
MUC1-201ENST00000337604 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
MUC1-201ENST00000337604 LINC00116Q8NCU8 138 aa21.96■■□□□ 1.11
MUC1-201ENST00000337604 TMOD3Q9NYL9 352 aa21.96■■□□□ 1.11
MUC1-201ENST00000337604 ASAP1Q9ULH1 1129 aa21.96■■□□□ 1.11
MUC1-201ENST00000337604 AK7Q96M32 723 aa21.95■■□□□ 1.1
MUC1-201ENST00000337604 ITPK1Q13572 414 aa21.94■■□□□ 1.1
MUC1-201ENST00000337604 FLAD1Q8NFF5 587 aa21.94■■□□□ 1.1
MUC1-201ENST00000337604 KDRP35968 1356 aa21.94■■□□□ 1.1
MUC1-201ENST00000337604 KDM6AO15550 1401 aaPredicted RBP21.93■■□□□ 1.1
MUC1-201ENST00000337604 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
MUC1-201ENST00000337604 PHF14O94880 888 aa21.92■■□□□ 1.1
MUC1-201ENST00000337604 YBX3P16989 372 aaKnown RBP eCLIP21.92■■□□□ 1.1
MUC1-201ENST00000337604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.91■■□□□ 1.1
MUC1-201ENST00000337604 HMGB2P26583 209 aaKnown RBP21.91■■□□□ 1.1
MUC1-201ENST00000337604 ATG3Q9NT62 314 aa21.91■■□□□ 1.1
MUC1-201ENST00000337604 AEBP1Q8IUX7 1158 aa21.9■■□□□ 1.1
MUC1-201ENST00000337604 ZNF831Q5JPB2 1677 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms