RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 AKAP4Q5JQC9 854 aa11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 PLEKHH1Q9ULM0 1364 aa11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 HOXC9P31274 260 aa11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 CLASRPQ8N2M8 674 aaKnown RBP11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 ISY1Q9ULR0 285 aaKnown RBP11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 FANCIQ9NVI1 1328 aa11.43□□□□□ -0.58
FNDC3B-201ENST00000336824 REC8O95072 547 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 DCTN1Q14203 1278 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 HSP90AB3PQ58FF7 597 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 MAP3K19Q56UN5 1328 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 PER1O15534 1290 aaPredicted RBP11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 PTCD1O75127 700 aaKnown RBP11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 ANKARQ7Z5J8 1434 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 PTPRCP08575 1304 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 CDC42BPGQ6DT37 1551 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 MVPQ14764 893 aaKnown RBP11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
FNDC3B-201ENST00000336824 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 ROBO2Q9HCK4 1378 aa11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 THUMPD2Q9BTF0 503 aaKnown RBP11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 ZPR1O75312 459 aa11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 BCAR3O75815 825 aa11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 ZRANB1Q9UGI0 708 aa11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 POLR1AO95602 1720 aaPredicted RBP11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 ST18O60284 1047 aa11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 DDB1Q16531 1140 aa11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 PPLO60437 1756 aa11.41□□□□□ -0.58
FNDC3B-201ENST00000336824 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.58
FNDC3B-201ENST00000336824 MIS18AQ9NYP9 233 aa11.4□□□□□ -0.58
FNDC3B-201ENST00000336824 PCDH11XQ9BZA7 1347 aa11.4□□□□□ -0.58
FNDC3B-201ENST00000336824 PCDH11YQ9BZA8 1340 aa11.4□□□□□ -0.58
FNDC3B-201ENST00000336824 REREQ9P2R6 1566 aa11.4□□□□□ -0.58
FNDC3B-201ENST00000336824 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
FNDC3B-201ENST00000336824 CCDC57Q2TAC2 916 aa11.4□□□□□ -0.58
FNDC3B-201ENST00000336824 MAP3K5Q99683 1374 aa11.4□□□□□ -0.59
FNDC3B-201ENST00000336824 SURF6O75683 361 aaKnown RBP11.4□□□□□ -0.59
FNDC3B-201ENST00000336824 FBLN1P23142 703 aa11.4□□□□□ -0.59
FNDC3B-201ENST00000336824 SNRPA1P09661 255 aaKnown RBP11.39□□□□□ -0.59
FNDC3B-201ENST00000336824 KIF3AQ9Y496 699 aa11.39□□□□□ -0.59
FNDC3B-201ENST00000336824 CNNM1Q9NRU3 951 aa11.39□□□□□ -0.59
FNDC3B-201ENST00000336824 NEXMIFQ5QGS0 1516 aa11.39□□□□□ -0.59
FNDC3B-201ENST00000336824 DCAF8L1A6NGE4 600 aa11.39□□□□□ -0.59
FNDC3B-201ENST00000336824 NEUROD6Q96NK8 337 aa11.39□□□□□ -0.59
FNDC3B-201ENST00000336824 BTG4Q9NY30 223 aa11.39□□□□□ -0.59
FNDC3B-201ENST00000336824 NBR1Q14596 966 aa11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 SOS1Q07889 1333 aaPredicted RBP11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 RARSP54136 660 aaKnown RBP11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 RNF20Q5VTR2 975 aa11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 GNL3LQ9NVN8 582 aaKnown RBP11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 DIP2AQ14689 1571 aa11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 SPATA31D1Q6ZQQ2 1576 aa11.38□□□□□ -0.59
FNDC3B-201ENST00000336824 GOLGA6L4A6NEF3 574 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 CNTROBQ8N137 903 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 LNPKQ9C0E8 428 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 A0A087WZG4 1122 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 MPHOSPH8Q99549 860 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 TRIM34Q9BYJ4 488 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 HIP1O00291 1037 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 USP6P35125 1406 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 PTPRMP28827 1452 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 ZKSCAN1P17029 563 aaPredicted RBP11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 EYA1Q99502 592 aa11.37□□□□□ -0.59
FNDC3B-201ENST00000336824 TAOK2Q9UL54 1235 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 NEURL4Q96JN8 1562 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 ITSN1Q15811 1721 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 SSH1Q8WYL5 1049 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 TOMM22Q9NS69 142 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 PTMSP20962 102 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 MBIPQ9NS73 344 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 TBC1D2BQ9UPU7 963 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 ADGRL3Q9HAR2 1447 aa11.36□□□□□ -0.59
FNDC3B-201ENST00000336824 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 RPAP2Q8IXW5 612 aaPredicted RBP11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 LRRCC1Q9C099 1032 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 CCDC158Q5M9N0 1113 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 AEBP1Q8IUX7 1158 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 BABAM1Q9NWV8 329 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 INSRP06213 1382 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 KIF24Q5T7B8 1368 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 AATKQ6ZMQ8 1374 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 FRMPD1Q5SYB0 1578 aa11.35□□□□□ -0.59
FNDC3B-201ENST00000336824 AK7Q96M32 723 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 TULP4Q9NRJ4 1543 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 APPP05067 770 aa11.34□□□□□ -0.59
FNDC3B-201ENST00000336824 VWDEQ8N2E2 1590 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms