RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PLEKHG1Q9ULL1 1385 aa17.3■□□□□ 0.36
SF1-202ENST00000334944 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
SF1-202ENST00000334944 USP6P35125 1406 aa17.3■□□□□ 0.36
SF1-202ENST00000334944 PLEKHG3A1L390 1219 aa17.29■□□□□ 0.36
SF1-202ENST00000334944 NUCB1Q02818 461 aa17.29■□□□□ 0.36
SF1-202ENST00000334944 MRE11P49959 708 aa17.29■□□□□ 0.36
SF1-202ENST00000334944 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
SF1-202ENST00000334944 MON2Q7Z3U7 1717 aa17.29■□□□□ 0.36
SF1-202ENST00000334944 KCNA6P17658 529 aa17.29■□□□□ 0.36
SF1-202ENST00000334944 AMPHP49418 695 aa17.29■□□□□ 0.36
SF1-202ENST00000334944 C22orf23Q9BZE7 217 aa17.29■□□□□ 0.36
SF1-202ENST00000334944 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
SF1-202ENST00000334944 C3P01024 1663 aa17.28■□□□□ 0.36
SF1-202ENST00000334944 ITSN1Q15811 1721 aa17.28■□□□□ 0.36
SF1-202ENST00000334944 NLRP6P59044 892 aa17.28■□□□□ 0.36
SF1-202ENST00000334944 NECTIN2Q92692 538 aa17.28■□□□□ 0.36
SF1-202ENST00000334944 ZHX1Q9UKY1 873 aaPredicted RBP17.27■□□□□ 0.36
SF1-202ENST00000334944 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
SF1-202ENST00000334944 MTHFSDQ2M296 383 aaKnown RBP17.27■□□□□ 0.35
SF1-202ENST00000334944 GAS2L3Q86XJ1 694 aa17.27■□□□□ 0.35
SF1-202ENST00000334944 OVOS2A0A0J9YW53 1432 aa17.25■□□□□ 0.35
SF1-202ENST00000334944 OVOS2Q6IE36 1432 aa17.25■□□□□ 0.35
SF1-202ENST00000334944 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
SF1-202ENST00000334944 ABCC4O15439 1325 aa17.25■□□□□ 0.35
SF1-202ENST00000334944 AKAP12Q02952 1782 aa17.25■□□□□ 0.35
SF1-202ENST00000334944 TPM2P07951 284 aa17.24■□□□□ 0.35
SF1-202ENST00000334944 KNDC1Q76NI1 1749 aa17.24■□□□□ 0.35
SF1-202ENST00000334944 SLC4A10Q6U841 1118 aa17.24■□□□□ 0.35
SF1-202ENST00000334944 USHBP1Q8N6Y0 703 aa17.24■□□□□ 0.35
SF1-202ENST00000334944 EYA1Q99502 592 aa17.24■□□□□ 0.35
SF1-202ENST00000334944 F6X3S4 739 aa17.24■□□□□ 0.35
SF1-202ENST00000334944 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
SF1-202ENST00000334944 ARHGAP45Q92619 1136 aa17.24■□□□□ 0.35
SF1-202ENST00000334944 CHL1O00533 1208 aa17.23■□□□□ 0.35
SF1-202ENST00000334944 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
SF1-202ENST00000334944 C16orf71Q8IYS4 520 aaPredicted RBP17.23■□□□□ 0.35
SF1-202ENST00000334944 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
SF1-202ENST00000334944 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
SF1-202ENST00000334944 G2E3Q7L622 706 aa17.22■□□□□ 0.35
SF1-202ENST00000334944 API5Q9BZZ5 524 aaKnown RBP17.22■□□□□ 0.35
SF1-202ENST00000334944 PTCH1Q13635 1447 aa17.22■□□□□ 0.35
SF1-202ENST00000334944 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
SF1-202ENST00000334944 TSPYL4Q9UJ04 414 aa17.22■□□□□ 0.35
SF1-202ENST00000334944 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
SF1-202ENST00000334944 ABTB2Q8N961 1025 aa17.22■□□□□ 0.35
SF1-202ENST00000334944 RGPD8O14715 1765 aaPredicted RBP17.21■□□□□ 0.35
SF1-202ENST00000334944 RIMS1Q86UR5 1692 aaKnown RBP17.21■□□□□ 0.35
SF1-202ENST00000334944 OTUD7AQ8TE49 926 aaPredicted RBP17.2■□□□□ 0.34
SF1-202ENST00000334944 MEIS3Q99687 375 aa17.2■□□□□ 0.34
SF1-202ENST00000334944 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
SF1-202ENST00000334944 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
SF1-202ENST00000334944 FGD1P98174 961 aa17.19■□□□□ 0.34
SF1-202ENST00000334944 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
SF1-202ENST00000334944 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
SF1-202ENST00000334944 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
SF1-202ENST00000334944 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
SF1-202ENST00000334944 MSH6P52701 1360 aa17.17■□□□□ 0.34
SF1-202ENST00000334944 USP31Q70CQ4 1352 aa17.17■□□□□ 0.34
SF1-202ENST00000334944 SSH2Q76I76 1423 aa17.17■□□□□ 0.34
SF1-202ENST00000334944 NRKQ7Z2Y5 1582 aa17.17■□□□□ 0.34
SF1-202ENST00000334944 FLT4P35916 1363 aa17.16■□□□□ 0.34
SF1-202ENST00000334944 TBC1D9Q6ZT07 1266 aa17.16■□□□□ 0.34
SF1-202ENST00000334944 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
SF1-202ENST00000334944 CEP170BQ9Y4F5 1589 aaPredicted RBP17.16■□□□□ 0.34
SF1-202ENST00000334944 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
SF1-202ENST00000334944 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
SF1-202ENST00000334944 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
SF1-202ENST00000334944 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
SF1-202ENST00000334944 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
SF1-202ENST00000334944 CRB1P82279 1406 aa17.15■□□□□ 0.34
SF1-202ENST00000334944 HOXC9P31274 260 aa17.15■□□□□ 0.34
SF1-202ENST00000334944 SBNO1A3KN83 1393 aa17.14■□□□□ 0.34
SF1-202ENST00000334944 TOPAZ1Q8N9V7 1692 aa17.14■□□□□ 0.33
SF1-202ENST00000334944 GSPT1P15170 499 aaKnown RBP17.14■□□□□ 0.33
SF1-202ENST00000334944 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
SF1-202ENST00000334944 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
SF1-202ENST00000334944 RGS12O14924 1447 aa17.14■□□□□ 0.33
SF1-202ENST00000334944 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
SF1-202ENST00000334944 CEP85Q6P2H3 762 aa17.13■□□□□ 0.33
SF1-202ENST00000334944 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
SF1-202ENST00000334944 PLEKHM2Q8IWE5 1019 aa17.12■□□□□ 0.33
SF1-202ENST00000334944 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
SF1-202ENST00000334944 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
SF1-202ENST00000334944 HSCBQ8IWL3 235 aa17.12■□□□□ 0.33
SF1-202ENST00000334944 IGSF1Q8N6C5 1336 aa17.11■□□□□ 0.33
SF1-202ENST00000334944 ARHGAP23Q9P227 1491 aa17.11■□□□□ 0.33
SF1-202ENST00000334944 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
SF1-202ENST00000334944 DCTPP1Q9H773 170 aa17.11■□□□□ 0.33
SF1-202ENST00000334944 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
SF1-202ENST00000334944 SLIT1O75093 1534 aa17.1■□□□□ 0.33
SF1-202ENST00000334944 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
SF1-202ENST00000334944 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
SF1-202ENST00000334944 MSNP26038 577 aaKnown RBP17.1■□□□□ 0.33
SF1-202ENST00000334944 FER1L4A9Z1Z3 1794 aa17.09■□□□□ 0.33
SF1-202ENST00000334944 GAS2L2Q8NHY3 880 aa17.09■□□□□ 0.33
SF1-202ENST00000334944 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
SF1-202ENST00000334944 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
SF1-202ENST00000334944 GNAT3A8MTJ3 354 aa17.09■□□□□ 0.33
SF1-202ENST00000334944 OFD1O75665 1012 aa17.09■□□□□ 0.33
SF1-202ENST00000334944 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms