RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
CMC1-201ENST00000334841 RUNDC1Q96C34 613 aa20.08■□□□□ 0.81
CMC1-201ENST00000334841 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
CMC1-201ENST00000334841 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
CMC1-201ENST00000334841 TATP17735 454 aaPredicted RBP20.07■□□□□ 0.8
CMC1-201ENST00000334841 TNS2Q63HR2 1409 aa20.07■□□□□ 0.8
CMC1-201ENST00000334841 FAM98CQ17RN3 349 aaKnown RBP20.06■□□□□ 0.8
CMC1-201ENST00000334841 PNNQ9H307 717 aaKnown RBP20.06■□□□□ 0.8
CMC1-201ENST00000334841 MAPK8IP3Q9UPT6 1336 aa20.05■□□□□ 0.8
CMC1-201ENST00000334841 MTHFSDQ2M296 383 aaKnown RBP20.03■□□□□ 0.8
CMC1-201ENST00000334841 POTEAQ6S8J7 498 aa20.03■□□□□ 0.8
CMC1-201ENST00000334841 CDCA7Q9BWT1 371 aaPredicted RBP20.03■□□□□ 0.8
CMC1-201ENST00000334841 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
CMC1-201ENST00000334841 RBM6P78332 1123 aaKnown RBP20.02■□□□□ 0.8
CMC1-201ENST00000334841 APAF1O14727 1248 aa20.01■□□□□ 0.79
CMC1-201ENST00000334841 NEFMP07197 916 aa20.01■□□□□ 0.79
CMC1-201ENST00000334841 AMOTQ4VCS5 1084 aa20.01■□□□□ 0.79
CMC1-201ENST00000334841 PLEKHO1Q53GL0 409 aaPredicted RBP20.01■□□□□ 0.79
CMC1-201ENST00000334841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.01■□□□□ 0.79
CMC1-201ENST00000334841 ONECUT3O60422 494 aaPredicted RBP20■□□□□ 0.79
CMC1-201ENST00000334841 NFE2L2Q16236 605 aa20■□□□□ 0.79
CMC1-201ENST00000334841 ZCRB1Q8TBF4 217 aaKnown RBP20■□□□□ 0.79
CMC1-201ENST00000334841 SPG7Q9UQ90 795 aa20■□□□□ 0.79
CMC1-201ENST00000334841 RRP7AQ9Y3A4 280 aaKnown RBP20■□□□□ 0.79
CMC1-201ENST00000334841 DLG5Q8TDM6 1919 aa20■□□□□ 0.79
CMC1-201ENST00000334841 TMPOP42166 694 aaKnown RBP19.99■□□□□ 0.79
CMC1-201ENST00000334841 ZNF530Q6P9A1 599 aaPredicted RBP19.99■□□□□ 0.79
CMC1-201ENST00000334841 GAS2L2Q8NHY3 880 aa19.99■□□□□ 0.79
CMC1-201ENST00000334841 RGS12O14924 1447 aa19.99■□□□□ 0.79
CMC1-201ENST00000334841 PCDH11XQ9BZA7 1347 aa19.99■□□□□ 0.79
CMC1-201ENST00000334841 PCDH11YQ9BZA8 1340 aa19.99■□□□□ 0.79
CMC1-201ENST00000334841 ADAMTS7Q9UKP4 1686 aa19.98■□□□□ 0.79
CMC1-201ENST00000334841 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
CMC1-201ENST00000334841 A0A0G2JS52 829 aa19.97■□□□□ 0.79
CMC1-201ENST00000334841 CYP27B1O15528 508 aa19.97■□□□□ 0.79
CMC1-201ENST00000334841 RXRBP28702 533 aa19.97■□□□□ 0.79
CMC1-201ENST00000334841 MYT1Q01538 1121 aa19.97■□□□□ 0.79
CMC1-201ENST00000334841 DDB1Q16531 1140 aa19.97■□□□□ 0.79
CMC1-201ENST00000334841 PHKG2P15735 406 aa19.96■□□□□ 0.79
CMC1-201ENST00000334841 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
CMC1-201ENST00000334841 TOGARAM1Q9Y4F4 1720 aa19.96■□□□□ 0.79
CMC1-201ENST00000334841 BRWD3Q6RI45 1802 aa19.95■□□□□ 0.78
CMC1-201ENST00000334841 KDM6AO15550 1401 aaPredicted RBP19.95■□□□□ 0.78
CMC1-201ENST00000334841 EXOC5O00471 708 aa19.95■□□□□ 0.78
CMC1-201ENST00000334841 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
CMC1-201ENST00000334841 RIPK4P57078 832 aa19.94■□□□□ 0.78
CMC1-201ENST00000334841 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.78
CMC1-201ENST00000334841 AKAP4Q5JQC9 854 aa19.94■□□□□ 0.78
CMC1-201ENST00000334841 C1orf141Q5JVX7 400 aa19.94■□□□□ 0.78
CMC1-201ENST00000334841 DDX54Q8TDD1 881 aaKnown RBP19.94■□□□□ 0.78
CMC1-201ENST00000334841 IFNL2Q8IZJ0 200 aa19.93■□□□□ 0.78
CMC1-201ENST00000334841 TRIM35Q9UPQ4 493 aa19.93■□□□□ 0.78
CMC1-201ENST00000334841 GNAT3A8MTJ3 354 aa19.92■□□□□ 0.78
CMC1-201ENST00000334841 MARCH10Q8NA82 808 aaPredicted RBP19.92■□□□□ 0.78
CMC1-201ENST00000334841 DOT1LQ8TEK3 1739 aa19.92■□□□□ 0.78
CMC1-201ENST00000334841 SCN11AQ9UI33 1791 aa19.92■□□□□ 0.78
CMC1-201ENST00000334841 VIRMAQ69YN4 1812 aaKnown RBP19.91■□□□□ 0.78
CMC1-201ENST00000334841 SALL2Q9Y467 1007 aaPredicted RBP19.91■□□□□ 0.78
CMC1-201ENST00000334841 MRC1P22897 1456 aa19.91■□□□□ 0.78
CMC1-201ENST00000334841 NCBP3Q53F19 620 aaKnown RBP19.9■□□□□ 0.78
CMC1-201ENST00000334841 YTHDC1Q96MU7 727 aaKnown RBP19.9■□□□□ 0.78
CMC1-201ENST00000334841 LMOD3Q0VAK6 560 aa19.89■□□□□ 0.77
CMC1-201ENST00000334841 PDE3BQ13370 1112 aa19.89■□□□□ 0.77
CMC1-201ENST00000334841 DCTN1Q14203 1278 aa19.89■□□□□ 0.77
CMC1-201ENST00000334841 NKX1-1Q15270 411 aaPredicted RBP19.89■□□□□ 0.77
CMC1-201ENST00000334841 CCDC27Q2M243 656 aa19.89■□□□□ 0.77
CMC1-201ENST00000334841 MPRIPQ6WCQ1 1025 aa19.89■□□□□ 0.77
CMC1-201ENST00000334841 MCM10Q7L590 875 aa19.89■□□□□ 0.77
CMC1-201ENST00000334841 CEMIPQ8WUJ3 1361 aa19.89■□□□□ 0.77
CMC1-201ENST00000334841 ZNF521Q96K83 1311 aa19.88■□□□□ 0.77
CMC1-201ENST00000334841 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
CMC1-201ENST00000334841 NGEFQ8N5V2 710 aa19.88■□□□□ 0.77
CMC1-201ENST00000334841 IL17REQ8NFR9 667 aa19.88■□□□□ 0.77
CMC1-201ENST00000334841 THUMPD2Q9BTF0 503 aaKnown RBP19.88■□□□□ 0.77
CMC1-201ENST00000334841 RNMTO43148 476 aaKnown RBP19.87■□□□□ 0.77
CMC1-201ENST00000334841 HSP90AB1P08238 724 aaKnown RBP19.87■□□□□ 0.77
CMC1-201ENST00000334841 WWC1Q8IX03 1113 aa19.87■□□□□ 0.77
CMC1-201ENST00000334841 RTF1Q92541 710 aaKnown RBP19.87■□□□□ 0.77
CMC1-201ENST00000334841 DCAF5Q96JK2 942 aa19.87■□□□□ 0.77
CMC1-201ENST00000334841 LGR6Q9HBX8 967 aa19.87■□□□□ 0.77
CMC1-201ENST00000334841 SIPA1L3O60292 1781 aaPredicted RBP19.87■□□□□ 0.77
CMC1-201ENST00000334841 FAM182BQ5T319 152 aa19.86■□□□□ 0.77
CMC1-201ENST00000334841 KRT27Q7Z3Y8 459 aa19.86■□□□□ 0.77
CMC1-201ENST00000334841 BCL9O00512 1426 aa19.85■□□□□ 0.77
CMC1-201ENST00000334841 ZBED9Q6R2W3 1325 aa19.85■□□□□ 0.77
CMC1-201ENST00000334841 NHSQ6T4R5 1651 aa19.84■□□□□ 0.77
CMC1-201ENST00000334841 ITGB4P16144 1822 aa19.82■□□□□ 0.76
CMC1-201ENST00000334841 PAPPAQ13219 1627 aa19.82■□□□□ 0.76
CMC1-201ENST00000334841 SBF2Q86WG5 1849 aa19.81■□□□□ 0.76
CMC1-201ENST00000334841 SLC52A2Q9HAB3 445 aa19.8■□□□□ 0.76
CMC1-201ENST00000334841 KDM3BQ7LBC6 1761 aa19.8■□□□□ 0.76
CMC1-201ENST00000334841 ERVV-2B6SEH9 535 aa19.79■□□□□ 0.76
CMC1-201ENST00000334841 TEFQ10587 303 aa19.79■□□□□ 0.76
CMC1-201ENST00000334841 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
CMC1-201ENST00000334841 ACSBG1Q96GR2 724 aa19.79■□□□□ 0.76
CMC1-201ENST00000334841 IL16Q14005 1332 aa19.78■□□□□ 0.76
CMC1-201ENST00000334841 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
CMC1-201ENST00000334841 CABP4P57796 275 aa19.77■□□□□ 0.76
CMC1-201ENST00000334841 CALD1Q05682 793 aaKnown RBP19.77■□□□□ 0.76
CMC1-201ENST00000334841 NFATC2IPQ8NCF5 419 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms