RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
PDZD8-201ENST00000334464 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
PDZD8-201ENST00000334464 TDO2P48775 406 aa19.5■□□□□ 0.71
PDZD8-201ENST00000334464 TMOD2Q9NZR1 351 aa19.5■□□□□ 0.71
PDZD8-201ENST00000334464 CCDC148Q8NFR7 591 aa19.49■□□□□ 0.71
PDZD8-201ENST00000334464 TAF4BQ92750 862 aa19.49■□□□□ 0.71
PDZD8-201ENST00000334464 EPB41L2O43491 1005 aaKnown RBP19.49■□□□□ 0.71
PDZD8-201ENST00000334464 NEBLO76041 1014 aa19.49■□□□□ 0.71
PDZD8-201ENST00000334464 RTEL1-TNFRSF6BF6WH68 1400 aa19.48■□□□□ 0.71
PDZD8-201ENST00000334464 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
PDZD8-201ENST00000334464 PPP4R3AQ6IN85 833 aa19.48■□□□□ 0.71
PDZD8-201ENST00000334464 RAB34Q9BZG1 259 aa19.48■□□□□ 0.71
PDZD8-201ENST00000334464 WDHD1O75717 1129 aaPredicted RBP19.48■□□□□ 0.71
PDZD8-201ENST00000334464 ZNF530Q6P9A1 599 aaPredicted RBP19.48■□□□□ 0.71
PDZD8-201ENST00000334464 ATF7IPQ6VMQ6 1270 aa19.48■□□□□ 0.71
PDZD8-201ENST00000334464 IGF1RP08069 1367 aa19.48■□□□□ 0.71
PDZD8-201ENST00000334464 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
PDZD8-201ENST00000334464 ANKRD62A6NC57 917 aa19.48■□□□□ 0.71
PDZD8-201ENST00000334464 CFAP65Q6ZU64 1925 aaKnown RBP19.48■□□□□ 0.71
PDZD8-201ENST00000334464 RBM42Q9BTD8 480 aaKnown RBP19.47■□□□□ 0.71
PDZD8-201ENST00000334464 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
PDZD8-201ENST00000334464 KIAA1328Q86T90 577 aa19.47■□□□□ 0.71
PDZD8-201ENST00000334464 AKAP2Q9Y2D5 859 aa19.47■□□□□ 0.71
PDZD8-201ENST00000334464 MPHOSPH10O00566 681 aaKnown RBP19.47■□□□□ 0.71
PDZD8-201ENST00000334464 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
PDZD8-201ENST00000334464 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
PDZD8-201ENST00000334464 IGHMBP2P38935 993 aaKnown RBP19.47■□□□□ 0.71
PDZD8-201ENST00000334464 CFTRP13569 1480 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 UPF3BQ9BZI7 483 aaKnown RBP19.46■□□□□ 0.71
PDZD8-201ENST00000334464 MVPQ14764 893 aaKnown RBP19.46■□□□□ 0.71
PDZD8-201ENST00000334464 ARHGAP29Q52LW3 1261 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 NUP62CLQ9H1M0 184 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 CCDC150Q8NCX0 1101 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 TXNDC2Q86VQ3 553 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 PROSER2Q86WR7 435 aaPredicted RBP19.46■□□□□ 0.71
PDZD8-201ENST00000334464 CEP126Q9P2H0 1117 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 RAB11FIP3O75154 756 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 ZNF76P36508 570 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 AACSQ86V21 672 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
PDZD8-201ENST00000334464 ZHX3Q9H4I2 956 aa19.46■□□□□ 0.71
PDZD8-201ENST00000334464 PTPN23Q9H3S7 1636 aa19.45■□□□□ 0.7
PDZD8-201ENST00000334464 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 NUTM2GQ5VZR2 741 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 ABCC11Q96J66 1382 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 PDZRN3Q9UPQ7 1066 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 ZSCAN12O43309 604 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 KIF20AO95235 890 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 STARD3NLO95772 234 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 PRAM1Q96QH2 718 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 CENPHQ9H3R5 247 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 TOM1L2Q6ZVM7 507 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 EIF5P55010 431 aaKnown RBP19.44■□□□□ 0.7
PDZD8-201ENST00000334464 CEBPZQ03701 1054 aaKnown RBP19.44■□□□□ 0.7
PDZD8-201ENST00000334464 PDRG1Q9NUG6 133 aa19.44■□□□□ 0.7
PDZD8-201ENST00000334464 MATR3P43243 847 aaKnown RBP eCLIP19.44■□□□□ 0.73e-6■■□□□ 12.9
PDZD8-201ENST00000334464 CHD1LQ86WJ1 897 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 SPC24Q8NBT2 197 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 HMGB1P09429 215 aaKnown RBP19.43■□□□□ 0.7
PDZD8-201ENST00000334464 RBM5P52756 815 aaKnown RBP eCLIP19.43■□□□□ 0.7
PDZD8-201ENST00000334464 SLF2Q8IX21 1173 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 NUP133Q8WUM0 1156 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 SH2B1Q9NRF2 756 aaPredicted RBP19.43■□□□□ 0.7
PDZD8-201ENST00000334464 EHMT1Q9H9B1 1298 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 DNMBPQ6XZF7 1577 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 SEPT11Q9NVA2 429 aaKnown RBP19.43■□□□□ 0.7
PDZD8-201ENST00000334464 STAMBPO95630 424 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 SPA17Q15506 151 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 MAP3K11Q16584 847 aa19.43■□□□□ 0.7
PDZD8-201ENST00000334464 TSG101Q99816 390 aa19.42■□□□□ 0.7
PDZD8-201ENST00000334464 LRRFIP2Q9Y608 721 aaKnown RBP19.42■□□□□ 0.7
PDZD8-201ENST00000334464 FCHSD2O94868 740 aa19.42■□□□□ 0.7
PDZD8-201ENST00000334464 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
PDZD8-201ENST00000334464 GOLGA6L10A0A0M3HER8 536 aa19.42■□□□□ 0.7
PDZD8-201ENST00000334464 PYM1Q9BRP8 204 aaKnown RBP19.42■□□□□ 0.7
PDZD8-201ENST00000334464 SCAND2PQ9GZW5 306 aaPredicted RBP19.42■□□□□ 0.7
PDZD8-201ENST00000334464 TAX1BP1Q86VP1 789 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 AIDAQ96BJ3 306 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 EXOSC9Q06265 439 aaKnown RBP19.41■□□□□ 0.7
PDZD8-201ENST00000334464 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
PDZD8-201ENST00000334464 FKBP15Q5T1M5 1219 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 STRN4Q9NRL3 753 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 FAM107BQ9H098 131 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 LRP2BPQ9P2M1 347 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 CRACR2AQ9BSW2 395 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 SRGAP3O43295 1099 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 SFPQP23246 707 aaKnown RBP eCLIP19.41■□□□□ 0.7
PDZD8-201ENST00000334464 CCDC83Q8IWF9 413 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 ANAPC15P60006 121 aa19.41■□□□□ 0.7
PDZD8-201ENST00000334464 PRG4Q92954 1404 aaPredicted RBP19.4■□□□□ 0.7
PDZD8-201ENST00000334464 CTAGE5O15320 804 aa19.4■□□□□ 0.7
PDZD8-201ENST00000334464 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
PDZD8-201ENST00000334464 KCNH5Q8NCM2 988 aa19.4■□□□□ 0.7
PDZD8-201ENST00000334464 SULT6B1Q6IMI4 303 aa19.4■□□□□ 0.7
PDZD8-201ENST00000334464 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
PDZD8-201ENST00000334464 CDK19Q9BWU1 502 aa19.4■□□□□ 0.7
PDZD8-201ENST00000334464 CAVIN2O95810 425 aa19.4■□□□□ 0.7
PDZD8-201ENST00000334464 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms