RNA–Protein interactions for RNA: ENST00000330560.7

CDCA2-201, Transcript of cell division cycle associated 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCA2, Length 3,731 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-201ENST00000330560 ARHGEF28Q8N1W1 1705 aaKnown RBP18.41■□□□□ 0.54
CDCA2-201ENST00000330560 LRRC7Q96NW7 1537 aa18.41■□□□□ 0.54
CDCA2-201ENST00000330560 FLIIQ13045 1269 aa18.4■□□□□ 0.54
CDCA2-201ENST00000330560 ANKLE2Q86XL3 938 aa18.4■□□□□ 0.54
CDCA2-201ENST00000330560 PHAXQ9H814 394 aaKnown RBP18.4■□□□□ 0.54
CDCA2-201ENST00000330560 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
CDCA2-201ENST00000330560 DTNBO60941 627 aa18.4■□□□□ 0.54
CDCA2-201ENST00000330560 SURF6O75683 361 aaKnown RBP18.4■□□□□ 0.54
CDCA2-201ENST00000330560 DDX17Q92841 729 aaKnown RBP18.4■□□□□ 0.54
CDCA2-201ENST00000330560 NUTM1Q86Y26 1132 aa18.4■□□□□ 0.54
CDCA2-201ENST00000330560 NLRP2Q9NX02 1062 aa18.4■□□□□ 0.54
CDCA2-201ENST00000330560 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
CDCA2-201ENST00000330560 CCDC30Q5VVM6 783 aa18.39■□□□□ 0.54
CDCA2-201ENST00000330560 TMEM131LA2VDJ0 1609 aa18.39■□□□□ 0.54
CDCA2-201ENST00000330560 MSH6P52701 1360 aa18.39■□□□□ 0.53
CDCA2-201ENST00000330560 GNAI2P04899 355 aa18.39■□□□□ 0.53
CDCA2-201ENST00000330560 ZNF853P0CG23 659 aa18.39■□□□□ 0.53
CDCA2-201ENST00000330560 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
CDCA2-201ENST00000330560 LGR6Q9HBX8 967 aa18.39■□□□□ 0.53
CDCA2-201ENST00000330560 UBTFL1P0CB47 393 aaPredicted RBP18.38■□□□□ 0.53
CDCA2-201ENST00000330560 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
CDCA2-201ENST00000330560 PREX1Q8TCU6 1659 aa18.38■□□□□ 0.53
CDCA2-201ENST00000330560 C1orf141Q5JVX7 400 aa18.38■□□□□ 0.53
CDCA2-201ENST00000330560 CEP85Q6P2H3 762 aa18.38■□□□□ 0.53
CDCA2-201ENST00000330560 PROSER2Q86WR7 435 aaPredicted RBP18.38■□□□□ 0.53
CDCA2-201ENST00000330560 PLEKHG3A1L390 1219 aa18.38■□□□□ 0.53
CDCA2-201ENST00000330560 TRAK2O60296 914 aa18.38■□□□□ 0.53
CDCA2-201ENST00000330560 CD2BP2O95400 341 aaKnown RBP18.38■□□□□ 0.53
CDCA2-201ENST00000330560 PIP4K2AP48426 406 aaPredicted RBP18.38■□□□□ 0.53
CDCA2-201ENST00000330560 HOXC9P31274 260 aa18.37■□□□□ 0.53
CDCA2-201ENST00000330560 MCM4P33991 863 aa18.37■□□□□ 0.53
CDCA2-201ENST00000330560 PLEKHM2Q8IWE5 1019 aa18.37■□□□□ 0.53
CDCA2-201ENST00000330560 RIMBP3CA6NJZ7 1639 aa18.37■□□□□ 0.53
CDCA2-201ENST00000330560 RIMBP3BA6NNM3 1639 aa18.37■□□□□ 0.53
CDCA2-201ENST00000330560 RIMBP3Q9UFD9 1639 aa18.37■□□□□ 0.53
CDCA2-201ENST00000330560 KCNQ3O43525 872 aa18.37■□□□□ 0.53
CDCA2-201ENST00000330560 SDSP20132 328 aa18.37■□□□□ 0.53
CDCA2-201ENST00000330560 LARP6Q9BRS8 491 aaKnown RBP18.37■□□□□ 0.53
CDCA2-201ENST00000330560 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
CDCA2-201ENST00000330560 TAOK2Q9UL54 1235 aa18.36■□□□□ 0.53
CDCA2-201ENST00000330560 JARID2Q92833 1246 aaPredicted RBP18.36■□□□□ 0.53
CDCA2-201ENST00000330560 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
CDCA2-201ENST00000330560 GOLGA6L3A6NEY3 463 aa18.35■□□□□ 0.53
CDCA2-201ENST00000330560 INTS3Q68E01 1043 aaKnown RBP18.35■□□□□ 0.53
CDCA2-201ENST00000330560 CABLES1Q8TDN4 633 aa18.35■□□□□ 0.53
CDCA2-201ENST00000330560 C9orf78Q9NZ63 289 aaPredicted RBP18.35■□□□□ 0.53
CDCA2-201ENST00000330560 TBX22Q9Y458 520 aa18.35■□□□□ 0.53
CDCA2-201ENST00000330560 SHPRHQ149N8 1683 aa18.35■□□□□ 0.53
CDCA2-201ENST00000330560 RPAP2Q8IXW5 612 aaPredicted RBP18.35■□□□□ 0.53
CDCA2-201ENST00000330560 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
CDCA2-201ENST00000330560 TAF7Q15545 349 aaPredicted RBP18.34■□□□□ 0.53
CDCA2-201ENST00000330560 ANKRD44Q8N8A2 993 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 NLRP1Q9C000 1473 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 SETD1BQ9UPS6 1966 aaKnown RBP18.34■□□□□ 0.53
CDCA2-201ENST00000330560 MYL6BP14649 208 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
CDCA2-201ENST00000330560 RICTORQ6R327 1708 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 NEK4P51957 841 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 NBPF6Q5VWK0 638 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 NBPF4Q96M43 638 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 DCTPP1Q9H773 170 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 ABCC4O15439 1325 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 ATP7BP35670 1465 aa18.34■□□□□ 0.53
CDCA2-201ENST00000330560 BTBD11A6QL63 1104 aa18.33■□□□□ 0.53
CDCA2-201ENST00000330560 GOLGA6L22H0YM25 854 aa18.33■□□□□ 0.53
CDCA2-201ENST00000330560 SRGAP3O43295 1099 aa18.33■□□□□ 0.53
CDCA2-201ENST00000330560 UPF3BQ9BZI7 483 aaKnown RBP18.33■□□□□ 0.53
CDCA2-201ENST00000330560 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
CDCA2-201ENST00000330560 FLT4P35916 1363 aa18.33■□□□□ 0.52
CDCA2-201ENST00000330560 CPSF1Q10570 1443 aaKnown RBP18.33■□□□□ 0.52
CDCA2-201ENST00000330560 PI4KAP2A4QPH2 592 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 PI4KAP1Q8N8J0 262 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 SIL1Q9H173 461 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 COL3A1P02461 1466 aaPredicted RBP18.32■□□□□ 0.52
CDCA2-201ENST00000330560 SSFA2P28290 1259 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
CDCA2-201ENST00000330560 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 GBP4Q96PP9 640 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 TTC22Q5TAA0 569 aa18.32■□□□□ 0.52
CDCA2-201ENST00000330560 KCNJ4P48050 445 aa18.31■□□□□ 0.52
CDCA2-201ENST00000330560 MCTP1Q6DN14 999 aa18.31■□□□□ 0.52
CDCA2-201ENST00000330560 LRRCC1Q9C099 1032 aa18.31■□□□□ 0.52
CDCA2-201ENST00000330560 NEURL4Q96JN8 1562 aa18.31■□□□□ 0.52
CDCA2-201ENST00000330560 CHMP3Q9Y3E7 222 aa18.31■□□□□ 0.52
CDCA2-201ENST00000330560 K7ELQ4 463 aaPredicted RBP18.31■□□□□ 0.52
CDCA2-201ENST00000330560 TNPO1Q92973 898 aaKnown RBP18.31■□□□□ 0.52
CDCA2-201ENST00000330560 CHAMP1Q96JM3 812 aa18.31■□□□□ 0.52
CDCA2-201ENST00000330560 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
CDCA2-201ENST00000330560 USP6P35125 1406 aa18.3■□□□□ 0.52
CDCA2-201ENST00000330560 ANO8Q9HCE9 1232 aaPredicted RBP18.3■□□□□ 0.52
CDCA2-201ENST00000330560 GNAI3P08754 354 aa18.3■□□□□ 0.52
CDCA2-201ENST00000330560 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
CDCA2-201ENST00000330560 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
CDCA2-201ENST00000330560 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
CDCA2-201ENST00000330560 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
CDCA2-201ENST00000330560 ST18O60284 1047 aa18.28■□□□□ 0.52
CDCA2-201ENST00000330560 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms