RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
PCM1-201ENST00000325083 GPRASP1Q5JY77 1395 aa16.55■□□□□ 0.24
PCM1-201ENST00000325083 DDX11Q96FC9 970 aa16.55■□□□□ 0.24
PCM1-201ENST00000325083 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
PCM1-201ENST00000325083 TATP17735 454 aaPredicted RBP16.54■□□□□ 0.24
PCM1-201ENST00000325083 PRDM10Q9NQV6 1147 aa16.54■□□□□ 0.24
PCM1-201ENST00000325083 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
PCM1-201ENST00000325083 TMCO3Q6UWJ1 677 aa16.54■□□□□ 0.24
PCM1-201ENST00000325083 JPH4Q96JJ6 628 aa16.54■□□□□ 0.24
PCM1-201ENST00000325083 NUP62CLQ9H1M0 184 aa16.54■□□□□ 0.24
PCM1-201ENST00000325083 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 LIG1P18858 919 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 USP8P40818 1118 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 TOM1L2Q6ZVM7 507 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 SMTNL1A8MU46 457 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 CDKL5O76039 1030 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
PCM1-201ENST00000325083 SERPINA10Q9UK55 444 aa16.52■□□□□ 0.24
PCM1-201ENST00000325083 ARHGAP29Q52LW3 1261 aa16.52■□□□□ 0.24
PCM1-201ENST00000325083 RNF187Q5TA31 235 aaPredicted RBP16.52■□□□□ 0.23
PCM1-201ENST00000325083 SHTN1A0MZ66 631 aa16.52■□□□□ 0.23
PCM1-201ENST00000325083 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.52■□□□□ 0.23
PCM1-201ENST00000325083 COMMD10Q9Y6G5 202 aa16.52■□□□□ 0.23
PCM1-201ENST00000325083 IFFO1Q0D2I5 559 aa16.51■□□□□ 0.23
PCM1-201ENST00000325083 KLHL10Q6JEL2 608 aa16.51■□□□□ 0.23
PCM1-201ENST00000325083 SPA17Q15506 151 aa16.51■□□□□ 0.23
PCM1-201ENST00000325083 BLOC1S2Q6QNY1 142 aa16.51■□□□□ 0.23
PCM1-201ENST00000325083 CRACR2AQ9BSW2 395 aa16.51■□□□□ 0.23
PCM1-201ENST00000325083 GSTTP1A0A1W2PQM5 241 aa16.5■□□□□ 0.23
PCM1-201ENST00000325083 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
PCM1-201ENST00000325083 SEC63Q9UGP8 760 aaKnown RBP16.5■□□□□ 0.23
PCM1-201ENST00000325083 MACROD2A1Z1Q3 448 aa16.5■□□□□ 0.23
PCM1-201ENST00000325083 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
PCM1-201ENST00000325083 CEP131Q9UPN4 1083 aa16.49■□□□□ 0.23
PCM1-201ENST00000325083 CBX1P83916 185 aa16.49■□□□□ 0.23
PCM1-201ENST00000325083 TNIP1Q15025 636 aa16.49■□□□□ 0.23
PCM1-201ENST00000325083 IDH1O75874 414 aaKnown RBP16.49■□□□□ 0.23
PCM1-201ENST00000325083 CETN2P41208 172 aa16.49■□□□□ 0.23
PCM1-201ENST00000325083 TSG101Q99816 390 aa16.49■□□□□ 0.23
PCM1-201ENST00000325083 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
PCM1-201ENST00000325083 PPP4R3AQ6IN85 833 aa16.48■□□□□ 0.23
PCM1-201ENST00000325083 LARP1Q6PKG0 1096 aaKnown RBP16.48■□□□□ 0.23
PCM1-201ENST00000325083 PPP1R12BO60237 982 aaPredicted RBP16.48■□□□□ 0.23
PCM1-201ENST00000325083 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
PCM1-201ENST00000325083 TMEM87AQ8NBN3 555 aa16.48■□□□□ 0.23
PCM1-201ENST00000325083 WDR70Q9NW82 654 aa16.48■□□□□ 0.23
PCM1-201ENST00000325083 CCT4P50991 539 aaKnown RBP16.48■□□□□ 0.23
PCM1-201ENST00000325083 DNAI2Q9GZS0 605 aa16.48■□□□□ 0.23
PCM1-201ENST00000325083 AAMPQ13685 434 aa16.48■□□□□ 0.23
PCM1-201ENST00000325083 PIP4K2BP78356 416 aa16.48■□□□□ 0.23
PCM1-201ENST00000325083 FERMT2Q96AC1 680 aa16.48■□□□□ 0.23
PCM1-201ENST00000325083 BTBD11A6QL63 1104 aa16.47■□□□□ 0.23
PCM1-201ENST00000325083 POLR3GO15318 223 aaPredicted RBP16.47■□□□□ 0.23
PCM1-201ENST00000325083 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
PCM1-201ENST00000325083 POLR3DP05423 398 aaPredicted RBP16.47■□□□□ 0.23
PCM1-201ENST00000325083 SYCE3A1L190 88 aa16.47■□□□□ 0.23
PCM1-201ENST00000325083 MINDY4BA8MYZ0 360 aa16.47■□□□□ 0.23
PCM1-201ENST00000325083 SULT6B1Q6IMI4 303 aa16.47■□□□□ 0.23
PCM1-201ENST00000325083 LUZP1Q86V48 1076 aa16.47■□□□□ 0.23
PCM1-201ENST00000325083 PDCL2Q8N4E4 241 aa16.47■□□□□ 0.23
PCM1-201ENST00000325083 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
PCM1-201ENST00000325083 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 CCDC150Q8NCX0 1101 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 UBXN4Q92575 508 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 TMCO5BA8MYB1 307 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 SMC1AQ14683 1233 aaKnown RBP16.46■□□□□ 0.23
PCM1-201ENST00000325083 IL1RAPL2Q9NP60 686 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 GUCY1B3Q02153 619 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 PPM1EQ8WY54 764 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 WASF1Q92558 559 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 WIZO95785 1651 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
PCM1-201ENST00000325083 TRMT1LQ7Z2T5 733 aaKnown RBP16.46■□□□□ 0.23
PCM1-201ENST00000325083 DDX23Q9BUQ8 820 aaKnown RBP16.46■□□□□ 0.23
PCM1-201ENST00000325083 FKBP15Q5T1M5 1219 aa16.46■□□□□ 0.22
PCM1-201ENST00000325083 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.22
PCM1-201ENST00000325083 GCOM1H8Y6P7 765 aaPredicted RBP16.45■□□□□ 0.22
PCM1-201ENST00000325083 MYZAPP0CAP1 466 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
PCM1-201ENST00000325083 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 GPATCH11Q8N954 259 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 PLCD3Q8N3E9 789 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 AIDAQ96BJ3 306 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 CTNNA2P26232 953 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 CHD1LQ86WJ1 897 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
PCM1-201ENST00000325083 CRACR2BQ8N4Y2 399 aaPredicted RBP16.45■□□□□ 0.22
PCM1-201ENST00000325083 KIF5CO60282 957 aa16.44■□□□□ 0.22
PCM1-201ENST00000325083 TTLL12Q14166 644 aaPredicted RBP16.44■□□□□ 0.22
PCM1-201ENST00000325083 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
PCM1-201ENST00000325083 DRC1Q96MC2 740 aa16.44■□□□□ 0.22
PCM1-201ENST00000325083 SRGAP3O43295 1099 aa16.44■□□□□ 0.22
PCM1-201ENST00000325083 ZFP91Q96JP5 570 aaPredicted RBP16.44■□□□□ 0.22
PCM1-201ENST00000325083 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
PCM1-201ENST00000325083 CPLX3Q8WVH0 158 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms