RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 NACAP1Q9BZK3 213 aa12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 RAB11FIP3O75154 756 aa12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 THOC2Q8NI27 1593 aaKnown RBP12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 CCDC57Q2TAC2 916 aa12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 PPP6R1Q9UPN7 881 aa12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 KRT32Q14532 448 aa12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 TRIM22Q8IYM9 498 aa12.92□□□□□ -0.34
SNRNP200-201ENST00000323853 CBFA2T2O43439 604 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 RBM10P98175 930 aaKnown RBP12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 MCM10Q7L590 875 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 DISP3Q9P2K9 1392 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 OFD1O75665 1012 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 MX1P20591 662 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 BRPF1P55201 1214 aaPredicted RBP12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
SNRNP200-201ENST00000323853 CDKL5O76039 1030 aa12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 POGZQ7Z3K3 1410 aa12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 NSD2O96028 1365 aa12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 NUP62CLQ9H1M0 184 aa12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 CFAP45Q9UL16 551 aa12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 FKBP4Q02790 459 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 THUMPD2Q9BTF0 503 aaKnown RBP12.9□□□□□ -0.34
SNRNP200-201ENST00000323853 CTNNA3Q9UI47 895 aa12.9□□□□□ -0.35
SNRNP200-201ENST00000323853 CWC15Q9P013 229 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 DDX54Q8TDD1 881 aaKnown RBP12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 PLEKHH1Q9ULM0 1364 aa12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 MAPKBP1O60336 1514 aa12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 UQCRHLA0A096LP55 91 aa12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 UQCRHP07919 91 aa12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 PPFIBP1Q86W92 1011 aa12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
SNRNP200-201ENST00000323853 PDIA4P13667 645 aaKnown RBP12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 MYO6Q9UM54 1294 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 WAPLQ7Z5K2 1190 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 ODF2Q5BJF6 829 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 SLC26A8Q96RN1 970 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 NOL7Q9UMY1 257 aaKnown RBP12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 UGGT2Q9NYU1 1516 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 ANKLE2Q86XL3 938 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 NOS1P29475 1434 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 CD109Q6YHK3 1445 aa12.88□□□□□ -0.35
SNRNP200-201ENST00000323853 CCAR1Q8IX12 1150 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 CTTNBP2Q8WZ74 1663 aa12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 KRT18P05783 430 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 KCNH5Q8NCM2 988 aa12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 ZNHIT6Q9NWK9 470 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 SYCE3A1L190 88 aa12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 CCDC112Q8NEF3 446 aa12.87□□□□□ -0.35
SNRNP200-201ENST00000323853 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-201ENST00000323853 STIM1Q13586 685 aa12.86□□□□□ -0.35
SNRNP200-201ENST00000323853 NME9Q86XW9 330 aa12.86□□□□□ -0.35
SNRNP200-201ENST00000323853 MPHOSPH8Q99549 860 aa12.86□□□□□ -0.35
SNRNP200-201ENST00000323853 RALGAPBQ86X10 1494 aa12.86□□□□□ -0.35
SNRNP200-201ENST00000323853 IMMTQ16891 758 aaKnown RBP12.86□□□□□ -0.35
SNRNP200-201ENST00000323853 CEP57L1Q8IYX8 460 aa12.86□□□□□ -0.35
SNRNP200-201ENST00000323853 WASF1Q92558 559 aa12.86□□□□□ -0.35
SNRNP200-201ENST00000323853 MPNDQ8N594 471 aa12.85□□□□□ -0.35
SNRNP200-201ENST00000323853 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-201ENST00000323853 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
SNRNP200-201ENST00000323853 PTPRCP08575 1304 aa12.85□□□□□ -0.35
SNRNP200-201ENST00000323853 SMTNL1A8MU46 457 aa12.85□□□□□ -0.35
SNRNP200-201ENST00000323853 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
SNRNP200-201ENST00000323853 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
SNRNP200-201ENST00000323853 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
SNRNP200-201ENST00000323853 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
SNRNP200-201ENST00000323853 TDO2P48775 406 aa12.84□□□□□ -0.35
SNRNP200-201ENST00000323853 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
SNRNP200-201ENST00000323853 UPF3BQ9BZI7 483 aaKnown RBP12.84□□□□□ -0.35
SNRNP200-201ENST00000323853 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
SNRNP200-201ENST00000323853 TRIM27P14373 513 aa12.84□□□□□ -0.35
SNRNP200-201ENST00000323853 ESPNB1AK53 854 aa12.84□□□□□ -0.35
SNRNP200-201ENST00000323853 CAMK4Q16566 473 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 CCDC183Q5T5S1 534 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 CFAP43Q8NDM7 1665 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 SOGA3Q5TF21 947 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 UBAC1Q9BSL1 405 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 EIF2AK4Q9P2K8 1649 aaKnown RBP12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 XPCQ01831 940 aaPredicted RBP12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
SNRNP200-201ENST00000323853 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms