RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 ISY1Q9ULR0 285 aaKnown RBP12.69□□□□□ -0.38
SF3B2-201ENST00000322535 ACEP12821 1306 aa12.69□□□□□ -0.38
SF3B2-201ENST00000322535 APAF1O14727 1248 aa12.68□□□□□ -0.38
SF3B2-201ENST00000322535 TBC1D32Q96NH3 1257 aa12.68□□□□□ -0.38
SF3B2-201ENST00000322535 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
SF3B2-201ENST00000322535 TICAM2Q86XR7 235 aa12.68□□□□□ -0.38
SF3B2-201ENST00000322535 MPNDQ8N594 471 aa12.68□□□□□ -0.38
SF3B2-201ENST00000322535 NGDNQ8NEJ9 315 aaKnown RBP12.68□□□□□ -0.38
SF3B2-201ENST00000322535 SLIT1O75093 1534 aa12.68□□□□□ -0.38
SF3B2-201ENST00000322535 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.67□□□□□ -0.38
SF3B2-201ENST00000322535 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
SF3B2-201ENST00000322535 EMILIN1Q9Y6C2 1016 aa12.67□□□□□ -0.38
SF3B2-201ENST00000322535 SETD1BQ9UPS6 1966 aaKnown RBP12.67□□□□□ -0.38
SF3B2-201ENST00000322535 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.67□□□□□ -0.38
SF3B2-201ENST00000322535 SASS6Q6UVJ0 657 aa12.67□□□□□ -0.38
SF3B2-201ENST00000322535 TNPO1Q92973 898 aaKnown RBP12.67□□□□□ -0.38
SF3B2-201ENST00000322535 PPP1R9BQ96SB3 815 aa12.67□□□□□ -0.38
SF3B2-201ENST00000322535 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
SF3B2-201ENST00000322535 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.388e-8■□□□□ 11.2
SF3B2-201ENST00000322535 YY1AP1Q9H869 796 aa12.66□□□□□ -0.38
SF3B2-201ENST00000322535 HSCBQ8IWL3 235 aa12.65□□□□□ -0.38
SF3B2-201ENST00000322535 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
SF3B2-201ENST00000322535 MED14O60244 1454 aa12.65□□□□□ -0.38
SF3B2-201ENST00000322535 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.38
SF3B2-201ENST00000322535 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
SF3B2-201ENST00000322535 IRF6O14896 467 aa12.64□□□□□ -0.39
SF3B2-201ENST00000322535 ESCO1Q5FWF5 840 aa12.64□□□□□ -0.39
SF3B2-201ENST00000322535 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
SF3B2-201ENST00000322535 DDX17Q92841 729 aaKnown RBP12.64□□□□□ -0.39
SF3B2-201ENST00000322535 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
SF3B2-201ENST00000322535 DDX49Q9Y6V7 483 aaKnown RBP12.64□□□□□ -0.39
SF3B2-201ENST00000322535 BCAR3O75815 825 aa12.64□□□□□ -0.39
SF3B2-201ENST00000322535 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-201ENST00000322535 GBP4Q96PP9 640 aa12.64□□□□□ -0.39
SF3B2-201ENST00000322535 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
SF3B2-201ENST00000322535 DMRT2Q9Y5R5 561 aa12.64□□□□□ -0.39
SF3B2-201ENST00000322535 ZNF500O60304 480 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-201ENST00000322535 PTMSP20962 102 aa12.63□□□□□ -0.39
SF3B2-201ENST00000322535 BANK1Q8NDB2 785 aa12.63□□□□□ -0.39
SF3B2-201ENST00000322535 ORAI2Q96SN7 254 aa12.63□□□□□ -0.39
SF3B2-201ENST00000322535 NOL7Q9UMY1 257 aaKnown RBP12.63□□□□□ -0.39
SF3B2-201ENST00000322535 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
SF3B2-201ENST00000322535 HMOX1P09601 288 aa12.63□□□□□ -0.39
SF3B2-201ENST00000322535 SIRT1Q96EB6 747 aa12.63□□□□□ -0.39
SF3B2-201ENST00000322535 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 TULP2O00295 520 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 CSPP1Q1MSJ5 1256 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 ZNF592Q92610 1267 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 TECPR2O15040 1411 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 TIGD1Q96MW7 591 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 PUS7Q96PZ0 661 aaKnown RBP12.62□□□□□ -0.39
SF3B2-201ENST00000322535 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-201ENST00000322535 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-201ENST00000322535 ATP7BP35670 1465 aa12.62□□□□□ -0.39
SF3B2-201ENST00000322535 FOXO3O43524 673 aa12.61□□□□□ -0.39
SF3B2-201ENST00000322535 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
SF3B2-201ENST00000322535 CPS1P31327 1500 aa12.61□□□□□ -0.39
SF3B2-201ENST00000322535 NPC1L1Q9UHC9 1359 aa12.61□□□□□ -0.39
SF3B2-201ENST00000322535 HSP90AB1P08238 724 aaKnown RBP12.61□□□□□ -0.39
SF3B2-201ENST00000322535 COG3Q96JB2 828 aa12.61□□□□□ -0.39
SF3B2-201ENST00000322535 POLKQ9UBT6 870 aa12.61□□□□□ -0.39
SF3B2-201ENST00000322535 CT47A1Q5JQC4 288 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-201ENST00000322535 RGPD8O14715 1765 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-201ENST00000322535 NKTRP30414 1462 aaKnown RBP12.6□□□□□ -0.39
SF3B2-201ENST00000322535 SKOR2Q2VWA4 1001 aaPredicted RBP12.6□□□□□ -0.39
SF3B2-201ENST00000322535 CFAP53Q96M91 514 aa12.6□□□□□ -0.39
SF3B2-201ENST00000322535 ZKSCAN5Q9Y2L8 839 aa12.6□□□□□ -0.39
SF3B2-201ENST00000322535 PHF14O94880 888 aa12.59□□□□□ -0.39
SF3B2-201ENST00000322535 U2AF2P26368 475 aaKnown RBP eCLIP12.59□□□□□ -0.393e-7■■□□□ 11.6
SF3B2-201ENST00000322535 LMOD3Q0VAK6 560 aa12.59□□□□□ -0.39
SF3B2-201ENST00000322535 TTC21BQ7Z4L5 1316 aa12.59□□□□□ -0.39
SF3B2-201ENST00000322535 CAVIN1Q6NZI2 390 aaKnown RBP12.59□□□□□ -0.39
SF3B2-201ENST00000322535 PANK1Q8TE04 598 aa12.59□□□□□ -0.39
SF3B2-201ENST00000322535 PLCD4Q9BRC7 762 aa12.59□□□□□ -0.39
SF3B2-201ENST00000322535 NLRP6P59044 892 aa12.58□□□□□ -0.4
SF3B2-201ENST00000322535 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
SF3B2-201ENST00000322535 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
SF3B2-201ENST00000322535 MYRIPQ8NFW9 859 aa12.58□□□□□ -0.4
SF3B2-201ENST00000322535 CPSF1Q10570 1443 aaKnown RBP12.57□□□□□ -0.4
SF3B2-201ENST00000322535 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
SF3B2-201ENST00000322535 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
SF3B2-201ENST00000322535 TMX1Q9H3N1 280 aa12.57□□□□□ -0.4
SF3B2-201ENST00000322535 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
SF3B2-201ENST00000322535 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
SF3B2-201ENST00000322535 NINLQ9Y2I6 1382 aa12.57□□□□□ -0.4
SF3B2-201ENST00000322535 GOLGA6L22H0YM25 854 aa12.56□□□□□ -0.4
SF3B2-201ENST00000322535 HSP90AB2PQ58FF8 381 aa12.56□□□□□ -0.4
SF3B2-201ENST00000322535 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
SF3B2-201ENST00000322535 PSME1Q06323 249 aa12.56□□□□□ -0.4
SF3B2-201ENST00000322535 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
SF3B2-201ENST00000322535 SH3BP1Q9Y3L3 701 aa12.56□□□□□ -0.4
SF3B2-201ENST00000322535 SLFN14P0C7P3 912 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 MCCP23508 829 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 SSFA2P28290 1259 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 PDCL2Q8N4E4 241 aa12.55□□□□□ -0.4
SF3B2-201ENST00000322535 FEZ2Q9UHY8 353 aaPredicted RBP12.55□□□□□ -0.4
SF3B2-201ENST00000322535 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms