RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SMARCA5O60264 1052 aaPredicted RBP21.87■■□□□ 1.09
PRKCB-202ENST00000321728 REC8O95072 547 aa21.87■■□□□ 1.09
PRKCB-202ENST00000321728 SASS6Q6UVJ0 657 aa21.87■■□□□ 1.09
PRKCB-202ENST00000321728 CDK19Q9BWU1 502 aa21.87■■□□□ 1.09
PRKCB-202ENST00000321728 ANKRD26Q9UPS8 1709 aa21.87■■□□□ 1.09
PRKCB-202ENST00000321728 WAPLQ7Z5K2 1190 aa21.86■■□□□ 1.09
PRKCB-202ENST00000321728 POLKQ9UBT6 870 aa21.86■■□□□ 1.09
PRKCB-202ENST00000321728 HECW2Q9P2P5 1572 aa21.86■■□□□ 1.09
PRKCB-202ENST00000321728 ZFYVE9O95405 1425 aa21.86■■□□□ 1.09
PRKCB-202ENST00000321728 MTERF4Q7Z6M4 381 aaKnown RBP21.85■■□□□ 1.09
PRKCB-202ENST00000321728 ZRANB1Q9UGI0 708 aa21.85■■□□□ 1.09
PRKCB-202ENST00000321728 CD163L1Q9NR16 1453 aa21.85■■□□□ 1.09
PRKCB-202ENST00000321728 MBD3O95983 291 aa21.85■■□□□ 1.09
PRKCB-202ENST00000321728 ZBTB7CA1YPR0 619 aa21.84■■□□□ 1.09
PRKCB-202ENST00000321728 ZNF853P0CG23 659 aa21.84■■□□□ 1.09
PRKCB-202ENST00000321728 MYO5BQ9ULV0 1848 aa21.84■■□□□ 1.09
PRKCB-202ENST00000321728 ANKRD44Q8N8A2 993 aa21.84■■□□□ 1.09
PRKCB-202ENST00000321728 KNDC1Q76NI1 1749 aa21.83■■□□□ 1.09
PRKCB-202ENST00000321728 EMILIN1Q9Y6C2 1016 aa21.83■■□□□ 1.09
PRKCB-202ENST00000321728 ERC2O15083 957 aa21.83■■□□□ 1.08
PRKCB-202ENST00000321728 NEK4P51957 841 aa21.83■■□□□ 1.08
PRKCB-202ENST00000321728 PRDM4Q9UKN5 801 aa21.83■■□□□ 1.08
PRKCB-202ENST00000321728 STAG3Q9UJ98 1225 aa21.82■■□□□ 1.08
PRKCB-202ENST00000321728 DNTTIP2Q5QJE6 756 aaKnown RBP21.81■■□□□ 1.08
PRKCB-202ENST00000321728 RPAP2Q8IXW5 612 aaPredicted RBP21.81■■□□□ 1.08
PRKCB-202ENST00000321728 TSPY26PQ9H489 355 aa21.81■■□□□ 1.08
PRKCB-202ENST00000321728 CDC42BPGQ6DT37 1551 aa21.81■■□□□ 1.08
PRKCB-202ENST00000321728 FAM83GA6ND36 823 aa21.81■■□□□ 1.08
PRKCB-202ENST00000321728 KIAA2012Q0VF49 1180 aa21.81■■□□□ 1.08
PRKCB-202ENST00000321728 DCTN1Q14203 1278 aa21.81■■□□□ 1.08
PRKCB-202ENST00000321728 TMX3Q96JJ7 454 aa21.81■■□□□ 1.08
PRKCB-202ENST00000321728 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
PRKCB-202ENST00000321728 CEP85Q6P2H3 762 aa21.8■■□□□ 1.08
PRKCB-202ENST00000321728 KIF24Q5T7B8 1368 aa21.8■■□□□ 1.08
PRKCB-202ENST00000321728 LMOD3Q0VAK6 560 aa21.79■■□□□ 1.08
PRKCB-202ENST00000321728 PIK3C2BO00750 1634 aa21.78■■□□□ 1.08
PRKCB-202ENST00000321728 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
PRKCB-202ENST00000321728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.78■■□□□ 1.082e-8■■□□□ 13.7
PRKCB-202ENST00000321728 MLH3Q9UHC1 1453 aa21.78■■□□□ 1.08
PRKCB-202ENST00000321728 FOXD4L6Q3SYB3 417 aaPredicted RBP21.78■■□□□ 1.08
PRKCB-202ENST00000321728 FOXD4L3Q6VB84 417 aaPredicted RBP21.78■■□□□ 1.08
PRKCB-202ENST00000321728 ATP10DQ9P241 1426 aa21.78■■□□□ 1.08
PRKCB-202ENST00000321728 PTPRMP28827 1452 aa21.77■■□□□ 1.08
PRKCB-202ENST00000321728 MPNDQ8N594 471 aa21.77■■□□□ 1.08
PRKCB-202ENST00000321728 SYAP1Q96A49 352 aaPredicted RBP21.77■■□□□ 1.08
PRKCB-202ENST00000321728 YEATS2Q9ULM3 1422 aa21.77■■□□□ 1.08
PRKCB-202ENST00000321728 BRD1O95696 1058 aa21.76■■□□□ 1.07
PRKCB-202ENST00000321728 NME9Q86XW9 330 aa21.76■■□□□ 1.07
PRKCB-202ENST00000321728 YTHDC2Q9H6S0 1430 aaKnown RBP21.76■■□□□ 1.07
PRKCB-202ENST00000321728 RRS1Q15050 365 aaKnown RBP21.76■■□□□ 1.07
PRKCB-202ENST00000321728 KIF20BQ96Q89 1820 aa21.75■■□□□ 1.07
PRKCB-202ENST00000321728 IL13P35225 146 aa21.75■■□□□ 1.07
PRKCB-202ENST00000321728 SMAP1Q8IYB5 467 aaPredicted RBP21.75■■□□□ 1.07
PRKCB-202ENST00000321728 PRDM10Q9NQV6 1147 aa21.74■■□□□ 1.07
PRKCB-202ENST00000321728 RIMS2Q9UQ26 1411 aa21.74■■□□□ 1.07
PRKCB-202ENST00000321728 MEIS3Q99687 375 aa21.74■■□□□ 1.07
PRKCB-202ENST00000321728 KRT24Q2M2I5 525 aa21.73■■□□□ 1.07
PRKCB-202ENST00000321728 MSH6P52701 1360 aa21.73■■□□□ 1.07
PRKCB-202ENST00000321728 MCM2P49736 904 aa21.73■■□□□ 1.07
PRKCB-202ENST00000321728 GDPD2Q9HCC8 539 aa21.73■■□□□ 1.07
PRKCB-202ENST00000321728 RTL1A6NKG5 1358 aa21.73■■□□□ 1.07
PRKCB-202ENST00000321728 PHF14O94880 888 aa21.72■■□□□ 1.07
PRKCB-202ENST00000321728 ZNF830Q96NB3 372 aaPredicted RBP21.72■■□□□ 1.07
PRKCB-202ENST00000321728 MAP2P11137 1827 aaKnown RBP21.72■■□□□ 1.07
PRKCB-202ENST00000321728 MLECQ14165 292 aa21.71■■□□□ 1.07
PRKCB-202ENST00000321728 MYRIPQ8NFW9 859 aa21.71■■□□□ 1.07
PRKCB-202ENST00000321728 PDE1AP54750 535 aa21.71■■□□□ 1.07
PRKCB-202ENST00000321728 CCDC94Q9BW85 323 aaPredicted RBP21.71■■□□□ 1.07
PRKCB-202ENST00000321728 GADD45BO75293 160 aaPredicted RBP21.7■■□□□ 1.06
PRKCB-202ENST00000321728 MCCP23508 829 aa21.7■■□□□ 1.06
PRKCB-202ENST00000321728 JARID2Q92833 1246 aaPredicted RBP21.7■■□□□ 1.06
PRKCB-202ENST00000321728 HMMRO75330 724 aa21.7■■□□□ 1.06
PRKCB-202ENST00000321728 TSHZ3Q63HK5 1081 aa21.7■■□□□ 1.06
PRKCB-202ENST00000321728 SOX12O15370 315 aa21.69■■□□□ 1.06
PRKCB-202ENST00000321728 CUL4AQ13619 759 aa21.69■■□□□ 1.06
PRKCB-202ENST00000321728 TPRNQ4KMQ1 711 aa21.69■■□□□ 1.06
PRKCB-202ENST00000321728 TSC1Q92574 1164 aa21.69■■□□□ 1.06
PRKCB-202ENST00000321728 SLC52A1Q9NWF4 448 aa21.69■■□□□ 1.06
PRKCB-202ENST00000321728 ARHGEF40Q8TER5 1519 aa21.68■■□□□ 1.06
PRKCB-202ENST00000321728 USP25Q9UHP3 1055 aa21.68■■□□□ 1.06
PRKCB-202ENST00000321728 PALD1Q9ULE6 856 aa21.68■■□□□ 1.06
PRKCB-202ENST00000321728 DIP2CQ9Y2E4 1556 aa21.68■■□□□ 1.06
PRKCB-202ENST00000321728 CLTCQ00610 1675 aaKnown RBP21.68■■□□□ 1.06
PRKCB-202ENST00000321728 DLG5Q8TDM6 1919 aa21.68■■□□□ 1.06
PRKCB-202ENST00000321728 RGS12O14924 1447 aa21.67■■□□□ 1.06
PRKCB-202ENST00000321728 NUTM2FA1L443 756 aa21.67■■□□□ 1.06
PRKCB-202ENST00000321728 HAP1P54257 671 aaPredicted RBP21.67■■□□□ 1.06
PRKCB-202ENST00000321728 USP48Q86UV5 1035 aa21.67■■□□□ 1.06
PRKCB-202ENST00000321728 ANO2Q9NQ90 1003 aa21.67■■□□□ 1.06
PRKCB-202ENST00000321728 NOLC1Q14978 699 aaKnown RBP eCLIP21.67■■□□□ 1.063e-8■□□□□ 11.3
PRKCB-202ENST00000321728 INTS4Q96HW7 963 aaKnown RBP21.67■■□□□ 1.06
PRKCB-202ENST00000321728 ESYT1Q9BSJ8 1104 aa21.67■■□□□ 1.06
PRKCB-202ENST00000321728 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.66■■□□□ 1.06
PRKCB-202ENST00000321728 PIBF1Q8WXW3 757 aa21.66■■□□□ 1.06
PRKCB-202ENST00000321728 FAM184AQ8NB25 1140 aa21.66■■□□□ 1.06
PRKCB-202ENST00000321728 PRIMPOLQ96LW4 560 aa21.66■■□□□ 1.06
PRKCB-202ENST00000321728 OSBPL3Q9H4L5 887 aa21.66■■□□□ 1.06
PRKCB-202ENST00000321728 TTC12Q9H892 705 aaPredicted RBP21.66■■□□□ 1.06
PRKCB-202ENST00000321728 SLC4A10Q6U841 1118 aa21.65■■□□□ 1.06
PRKCB-202ENST00000321728 C17orf53Q8N3J3 647 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms