RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 GLIPR1L2Q4G1C9 344 aa31.13■■■□□ 2.57
SENP3-201ENST00000321337 ANP32BQ92688 251 aaKnown RBP31.13■■■□□ 2.57
SENP3-201ENST00000321337 REREQ9P2R6 1566 aa31.13■■■□□ 2.57
SENP3-201ENST00000321337 YEATS2Q9ULM3 1422 aa31.13■■■□□ 2.57
SENP3-201ENST00000321337 NSFL1CQ9UNZ2 370 aaKnown RBP31.13■■■□□ 2.57
SENP3-201ENST00000321337 RGS12O14924 1447 aa31.13■■■□□ 2.57
SENP3-201ENST00000321337 AEBP1Q8IUX7 1158 aa31.12■■■□□ 2.57
SENP3-201ENST00000321337 MEIS3Q99687 375 aa31.12■■■□□ 2.57
SENP3-201ENST00000321337 MSH6P52701 1360 aa31.1■■■□□ 2.57
SENP3-201ENST00000321337 TPM2P07951 284 aa31.1■■■□□ 2.57
SENP3-201ENST00000321337 OFD1O75665 1012 aa31.09■■■□□ 2.57
SENP3-201ENST00000321337 MSNP26038 577 aaKnown RBP31.09■■■□□ 2.57
SENP3-201ENST00000321337 EIF2AK3Q9NZJ5 1116 aaKnown RBP31.09■■■□□ 2.57
SENP3-201ENST00000321337 PREX1Q8TCU6 1659 aa31.08■■■□□ 2.57
SENP3-201ENST00000321337 STAG3Q9UJ98 1225 aa31.08■■■□□ 2.57
SENP3-201ENST00000321337 LMOD3Q0VAK6 560 aa31.07■■■□□ 2.56
SENP3-201ENST00000321337 MCM10Q7L590 875 aa31.07■■■□□ 2.56
SENP3-201ENST00000321337 ZMYND15Q9H091 742 aa31.07■■■□□ 2.56
SENP3-201ENST00000321337 ATP7BP35670 1465 aa31.07■■■□□ 2.56
SENP3-201ENST00000321337 RTL1A6NKG5 1358 aa31.07■■■□□ 2.56
SENP3-201ENST00000321337 TMEM63CQ9P1W3 806 aa31.06■■■□□ 2.56
SENP3-201ENST00000321337 CDK12Q9NYV4 1490 aaPredicted RBP31.06■■■□□ 2.56
SENP3-201ENST00000321337 KIF24Q5T7B8 1368 aa31.05■■■□□ 2.56
SENP3-201ENST00000321337 TSHZ3Q63HK5 1081 aa31.05■■■□□ 2.56
SENP3-201ENST00000321337 ST18O60284 1047 aa31.05■■■□□ 2.56
SENP3-201ENST00000321337 RPAP2Q8IXW5 612 aaPredicted RBP31.04■■■□□ 2.56
SENP3-201ENST00000321337 CWC22Q9HCG8 908 aaKnown RBP31.03■■■□□ 2.56
SENP3-201ENST00000321337 CPS1P31327 1500 aa31.03■■■□□ 2.56
SENP3-201ENST00000321337 CPSF1Q10570 1443 aaKnown RBP31.03■■■□□ 2.56
SENP3-201ENST00000321337 SYCE3A1L190 88 aa31.02■■■□□ 2.56
SENP3-201ENST00000321337 XPCQ01831 940 aaPredicted RBP31.02■■■□□ 2.56
SENP3-201ENST00000321337 PDLIM2Q96JY6 352 aa31.02■■■□□ 2.56
SENP3-201ENST00000321337 RBM10P98175 930 aaKnown RBP31.01■■■□□ 2.56
SENP3-201ENST00000321337 COG3Q96JB2 828 aa31.01■■■□□ 2.55
SENP3-201ENST00000321337 MIS18AQ9NYP9 233 aa31.01■■■□□ 2.55
SENP3-201ENST00000321337 EDC4Q6P2E9 1401 aaKnown RBP31.01■■■□□ 2.55
SENP3-201ENST00000321337 SULT6B1Q6IMI4 303 aa31■■■□□ 2.55
SENP3-201ENST00000321337 CASC1Q6TDU7 716 aa31■■■□□ 2.55
SENP3-201ENST00000321337 R3HCC1Q9Y3T6 440 aaKnown RBP31■■■□□ 2.55
SENP3-201ENST00000321337 NOL7Q9UMY1 257 aaKnown RBP30.98■■■□□ 2.55
SENP3-201ENST00000321337 WASLO00401 505 aaPredicted RBP30.98■■■□□ 2.55
SENP3-201ENST00000321337 ERC2O15083 957 aa30.98■■■□□ 2.55
SENP3-201ENST00000321337 F6X3S4 739 aa30.97■■■□□ 2.55
SENP3-201ENST00000321337 CHL1O00533 1208 aa30.97■■■□□ 2.55
SENP3-201ENST00000321337 NEK4P51957 841 aa30.97■■■□□ 2.55
SENP3-201ENST00000321337 NOL8Q76FK4 1167 aaKnown RBP30.97■■■□□ 2.55
SENP3-201ENST00000321337 PKNOX2Q96KN3 472 aa30.97■■■□□ 2.55
SENP3-201ENST00000321337 AATKQ6ZMQ8 1374 aa30.97■■■□□ 2.55
SENP3-201ENST00000321337 REC8O95072 547 aa30.96■■■□□ 2.55
SENP3-201ENST00000321337 G2E3Q7L622 706 aa30.96■■■□□ 2.55
SENP3-201ENST00000321337 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.96■■■□□ 2.55
SENP3-201ENST00000321337 RNF214Q8ND24 703 aa30.96■■■□□ 2.55
SENP3-201ENST00000321337 EIF4A2Q14240 407 aaKnown RBP30.95■■■□□ 2.55
SENP3-201ENST00000321337 TMX3Q96JJ7 454 aa30.95■■■□□ 2.55
SENP3-201ENST00000321337 SLC4A2P04920 1241 aa30.95■■■□□ 2.55
SENP3-201ENST00000321337 TXNDC2Q86VQ3 553 aa30.95■■■□□ 2.55
SENP3-201ENST00000321337 NUDT16Q96DE0 195 aaKnown RBP30.95■■■□□ 2.55
SENP3-201ENST00000321337 SLC4A10Q6U841 1118 aa30.94■■■□□ 2.54
SENP3-201ENST00000321337 PALD1Q9ULE6 856 aa30.94■■■□□ 2.54
SENP3-201ENST00000321337 PDE1AP54750 535 aa30.94■■■□□ 2.54
SENP3-201ENST00000321337 LRSAM1Q6UWE0 723 aa30.94■■■□□ 2.54
SENP3-201ENST00000321337 NEO1Q92859 1461 aa30.93■■■□□ 2.54
SENP3-201ENST00000321337 EXOC6BQ9Y2D4 811 aa30.93■■■□□ 2.54
SENP3-201ENST00000321337 FOXD4L6Q3SYB3 417 aaPredicted RBP30.92■■■□□ 2.54
SENP3-201ENST00000321337 FOXD4L3Q6VB84 417 aaPredicted RBP30.92■■■□□ 2.54
SENP3-201ENST00000321337 HS1BP3Q53T59 392 aa30.91■■■□□ 2.54
SENP3-201ENST00000321337 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.91■■■□□ 2.54
SENP3-201ENST00000321337 PDCL3Q9H2J4 239 aa30.91■■■□□ 2.54
SENP3-201ENST00000321337 ZNF500O60304 480 aaPredicted RBP30.9■■■□□ 2.54
SENP3-201ENST00000321337 RICTORQ6R327 1708 aa30.89■■■□□ 2.53
SENP3-201ENST00000321337 RIMBP3CA6NJZ7 1639 aa30.88■■■□□ 2.53
SENP3-201ENST00000321337 RIMBP3BA6NNM3 1639 aa30.88■■■□□ 2.53
SENP3-201ENST00000321337 RIMBP3Q9UFD9 1639 aa30.88■■■□□ 2.53
SENP3-201ENST00000321337 ZKSCAN5Q9Y2L8 839 aa30.88■■■□□ 2.53
SENP3-201ENST00000321337 PTPRCP08575 1304 aa30.88■■■□□ 2.53
SENP3-201ENST00000321337 DLC1Q96QB1 1528 aa30.87■■■□□ 2.53
SENP3-201ENST00000321337 FOXO3O43524 673 aa30.87■■■□□ 2.53
SENP3-201ENST00000321337 METP08581 1390 aa30.87■■■□□ 2.53
SENP3-201ENST00000321337 GDPD2Q9HCC8 539 aa30.86■■■□□ 2.53
SENP3-201ENST00000321337 FAM13BQ9NYF5 915 aa30.86■■■□□ 2.53
SENP3-201ENST00000321337 BRD1O95696 1058 aa30.85■■■□□ 2.53
SENP3-201ENST00000321337 OSBPL3Q9H4L5 887 aa30.85■■■□□ 2.53
SENP3-201ENST00000321337 SOX12O15370 315 aa30.85■■■□□ 2.53
SENP3-201ENST00000321337 HSP90AB2PQ58FF8 381 aa30.85■■■□□ 2.53
SENP3-201ENST00000321337 ESYT1Q9BSJ8 1104 aa30.84■■■□□ 2.53
SENP3-201ENST00000321337 CCDC61Q9Y6R9 512 aa30.84■■■□□ 2.53
SENP3-201ENST00000321337 KIAA0232Q92628 1395 aa30.83■■■□□ 2.53
SENP3-201ENST00000321337 PRR36Q9H6K5 1346 aa30.83■■■□□ 2.53
SENP3-201ENST00000321337 A2ML1A8K2U0 1454 aa30.82■■■□□ 2.52
SENP3-201ENST00000321337 ZBTB7CA1YPR0 619 aa30.82■■■□□ 2.52
SENP3-201ENST00000321337 MPNDQ8N594 471 aa30.82■■■□□ 2.52
SENP3-201ENST00000321337 UPF3BQ9BZI7 483 aaKnown RBP30.82■■■□□ 2.52
SENP3-201ENST00000321337 GADD45BO75293 160 aaPredicted RBP30.81■■■□□ 2.52
SENP3-201ENST00000321337 HMMRO75330 724 aa30.81■■■□□ 2.52
SENP3-201ENST00000321337 SETD1AO15047 1707 aaKnown RBP30.81■■■□□ 2.52
SENP3-201ENST00000321337 SALL3Q9BXA9 1300 aa30.81■■■□□ 2.52
SENP3-201ENST00000321337 UQCRHLA0A096LP55 91 aa30.81■■■□□ 2.52
SENP3-201ENST00000321337 UQCRHP07919 91 aa30.81■■■□□ 2.52
SENP3-201ENST00000321337 UNC5CLQ8IV45 518 aa30.8■■■□□ 2.52
SENP3-201ENST00000321337 RILPL2Q969X0 211 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms