RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ALDH1L2Q3SY69 923 aa11.77□□□□□ -0.52
RPGR-201ENST00000318842 HDGFL2Q7Z4V5 671 aaPredicted RBP11.77□□□□□ -0.52
RPGR-201ENST00000318842 SPC24Q8NBT2 197 aa11.77□□□□□ -0.52
RPGR-201ENST00000318842 DCTPP1Q9H773 170 aa11.77□□□□□ -0.53
RPGR-201ENST00000318842 NOL7Q9UMY1 257 aaKnown RBP11.77□□□□□ -0.53
RPGR-201ENST00000318842 FCHSD2O94868 740 aa11.77□□□□□ -0.53
RPGR-201ENST00000318842 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.53
RPGR-201ENST00000318842 ZNF445P59923 1031 aa11.77□□□□□ -0.53
RPGR-201ENST00000318842 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.53
RPGR-201ENST00000318842 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
RPGR-201ENST00000318842 NUTM1Q86Y26 1132 aa11.77□□□□□ -0.53
RPGR-201ENST00000318842 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
RPGR-201ENST00000318842 ZKSCAN5Q9Y2L8 839 aa11.76□□□□□ -0.53
RPGR-201ENST00000318842 SBNO2Q9Y2G9 1366 aa11.76□□□□□ -0.53
RPGR-201ENST00000318842 GLI2P10070 1586 aa11.76□□□□□ -0.53
RPGR-201ENST00000318842 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
RPGR-201ENST00000318842 VGFO15240 615 aaPredicted RBP11.76□□□□□ -0.53
RPGR-201ENST00000318842 CNPY2Q9Y2B0 182 aa11.76□□□□□ -0.53
RPGR-201ENST00000318842 CD163L1Q9NR16 1453 aa11.76□□□□□ -0.53
RPGR-201ENST00000318842 CT47B1P0C2W7 299 aaPredicted RBP11.75□□□□□ -0.53
RPGR-201ENST00000318842 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 ST18O60284 1047 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 FAM173BQ6P4H8 233 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 SHROOM2Q13796 1616 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 FIBPO43427 364 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 IL13P35225 146 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 GNAI1P63096 354 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 LRSAM1Q6UWE0 723 aa11.75□□□□□ -0.53
RPGR-201ENST00000318842 NUCB2P80303 420 aa11.74□□□□□ -0.53
RPGR-201ENST00000318842 NUTM2GQ5VZR2 741 aa11.74□□□□□ -0.53
RPGR-201ENST00000318842 USP48Q86UV5 1035 aa11.74□□□□□ -0.53
RPGR-201ENST00000318842 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
RPGR-201ENST00000318842 PPFIA3O75145 1194 aa11.74□□□□□ -0.53
RPGR-201ENST00000318842 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
RPGR-201ENST00000318842 GIMAP6Q6P9H5 292 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 PDLIM2Q96JY6 352 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 NRXN1Q9ULB1 1477 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 AP5Z1O43299 807 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 PDE1AP54750 535 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 ANKRD44Q8N8A2 993 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 ADGRB3O60242 1522 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 IL16Q14005 1332 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
RPGR-201ENST00000318842 MED14O60244 1454 aa11.72□□□□□ -0.53
RPGR-201ENST00000318842 ERC2O15083 957 aa11.72□□□□□ -0.53
RPGR-201ENST00000318842 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
RPGR-201ENST00000318842 ZNF710Q8N1W2 664 aa11.72□□□□□ -0.53
RPGR-201ENST00000318842 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
RPGR-201ENST00000318842 FAM135BQ49AJ0 1406 aa11.72□□□□□ -0.53
RPGR-201ENST00000318842 YTHDC2Q9H6S0 1430 aaKnown RBP11.72□□□□□ -0.53
RPGR-201ENST00000318842 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
RPGR-201ENST00000318842 SPG7Q9UQ90 795 aa11.72□□□□□ -0.53
RPGR-201ENST00000318842 LARGE1O95461 756 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 ANXA1P04083 346 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 ZNF853P0CG23 659 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 FGD1P98174 961 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 ISY1Q9ULR0 285 aaKnown RBP11.71□□□□□ -0.53
RPGR-201ENST00000318842 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 DEPDC5O75140 1603 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 A0A087WWV3 80 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 FERMT3Q86UX7 667 aa11.71□□□□□ -0.53
RPGR-201ENST00000318842 CAMK4Q16566 473 aa11.71□□□□□ -0.54
RPGR-201ENST00000318842 API5Q9BZZ5 524 aaKnown RBP11.71□□□□□ -0.54
RPGR-201ENST00000318842 TSPY26PQ9H489 355 aa11.71□□□□□ -0.54
RPGR-201ENST00000318842 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.54
RPGR-201ENST00000318842 VWDEQ8N2E2 1590 aa11.7□□□□□ -0.54
RPGR-201ENST00000318842 PDE4CQ08493 712 aa11.7□□□□□ -0.54
RPGR-201ENST00000318842 LTV1Q96GA3 475 aaPredicted RBP11.7□□□□□ -0.54
RPGR-201ENST00000318842 IFT172Q9UG01 1749 aa11.7□□□□□ -0.54
RPGR-201ENST00000318842 PTCH1Q13635 1447 aa11.7□□□□□ -0.54
RPGR-201ENST00000318842 ADCY5O95622 1261 aa11.7□□□□□ -0.54
RPGR-201ENST00000318842 SRCIN1Q9C0H9 1055 aa11.7□□□□□ -0.54
RPGR-201ENST00000318842 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 MAPK8IP2Q13387 824 aaPredicted RBP11.69□□□□□ -0.54
RPGR-201ENST00000318842 ZBTB9Q96C00 473 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 PYCARDQ9ULZ3 195 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 ARHGEF40Q8TER5 1519 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
RPGR-201ENST00000318842 EIF4A2Q14240 407 aaKnown RBP11.69□□□□□ -0.54
RPGR-201ENST00000318842 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 ARHGEF28Q8N1W1 1705 aaKnown RBP11.69□□□□□ -0.54
RPGR-201ENST00000318842 MYO3AQ8NEV4 1616 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 TCHHQ07283 1943 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 ABCC3O15438 1527 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 INO80Q9ULG1 1556 aaPredicted RBP11.69□□□□□ -0.54
RPGR-201ENST00000318842 FOSBP53539 338 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 CASC1Q6TDU7 716 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 RASEFQ8IZ41 740 aa11.69□□□□□ -0.54
RPGR-201ENST00000318842 RGS12O14924 1447 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 ASXL2Q76L83 1435 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 NECAB1Q8N987 351 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
RPGR-201ENST00000318842 LRRFIP2Q9Y608 721 aaKnown RBP11.68□□□□□ -0.54
RPGR-201ENST00000318842 SIGLEC1Q9BZZ2 1709 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms